RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 TIAM1Q13009 1591 aa21.24■□□□□ 0.99
CCDC130-202ENST00000540216 RAPGEF3O95398 923 aa21.24■□□□□ 0.99
CCDC130-202ENST00000540216 CDC42BPBQ9Y5S2 1711 aa21.24■□□□□ 0.99
CCDC130-202ENST00000540216 CDC42BPAQ5VT25 1732 aa21.22■□□□□ 0.99
CCDC130-202ENST00000540216 MAP3K1Q13233 1512 aa21.22■□□□□ 0.99
CCDC130-202ENST00000540216 SCAPERQ9BY12 1400 aa21.21■□□□□ 0.99
CCDC130-202ENST00000540216 ZMYM4Q5VZL5 1548 aa21.21■□□□□ 0.99
CCDC130-202ENST00000540216 POGZQ7Z3K3 1410 aa21.21■□□□□ 0.99
CCDC130-202ENST00000540216 GPATCH8Q9UKJ3 1502 aaKnown RBP21.19■□□□□ 0.98
CCDC130-202ENST00000540216 CCNB3Q8WWL7 1395 aa21.18■□□□□ 0.98
CCDC130-202ENST00000540216 ABCC1P33527 1531 aa21.16■□□□□ 0.98
CCDC130-202ENST00000540216 ARHGEF40Q8TER5 1519 aa21.16■□□□□ 0.98
CCDC130-202ENST00000540216 ZNF518AQ6AHZ1 1483 aa21.16■□□□□ 0.98
CCDC130-202ENST00000540216 MAGI2Q86UL8 1455 aa21.16■□□□□ 0.98
CCDC130-202ENST00000540216 SUPT6HQ7KZ85 1726 aaKnown RBP21.15■□□□□ 0.98
CCDC130-202ENST00000540216 LRRC9Q6ZRR7 1453 aa21.14■□□□□ 0.98
CCDC130-202ENST00000540216 ITSN2Q9NZM3 1697 aa21.14■□□□□ 0.97
CCDC130-202ENST00000540216 ZFYVE16Q7Z3T8 1539 aa21.13■□□□□ 0.97
CCDC130-202ENST00000540216 KDM5CP41229 1560 aa21.12■□□□□ 0.97
CCDC130-202ENST00000540216 NCOA2Q15596 1464 aa21.12■□□□□ 0.97
CCDC130-202ENST00000540216 AEBP2Q6ZN18 517 aaPredicted RBP21.11■□□□□ 0.97
CCDC130-202ENST00000540216 CFDP1Q9UEE9 299 aaPredicted RBP21.11■□□□□ 0.97
CCDC130-202ENST00000540216 PLEKHH2Q8IVE3 1493 aa21.11■□□□□ 0.97
CCDC130-202ENST00000540216 SAMD9LQ8IVG5 1584 aa21.1■□□□□ 0.97
CCDC130-202ENST00000540216 KDM4FA0A1W2PPD8 638 aa21.09■□□□□ 0.97
CCDC130-202ENST00000540216 APLP2Q06481 763 aa21.09■□□□□ 0.97
CCDC130-202ENST00000540216 KIAA1107Q9UPP5 1409 aa21.08■□□□□ 0.97
CCDC130-202ENST00000540216 ARHGEF12Q9NZN5 1544 aa21.08■□□□□ 0.96
CCDC130-202ENST00000540216 YEATS2Q9ULM3 1422 aa21.06■□□□□ 0.96
CCDC130-202ENST00000540216 ZNF777Q9ULD5 760 aaPredicted RBP21.06■□□□□ 0.96
CCDC130-202ENST00000540216 HECW2Q9P2P5 1572 aa21.06■□□□□ 0.96
CCDC130-202ENST00000540216 SYCP2Q9BX26 1530 aa21.05■□□□□ 0.96
CCDC130-202ENST00000540216 AFAP1Q8N556 730 aa21.05■□□□□ 0.96
CCDC130-202ENST00000540216 TRAPPC8Q9Y2L5 1435 aa21.04■□□□□ 0.96
CCDC130-202ENST00000540216 MLH3Q9UHC1 1453 aa21.04■□□□□ 0.96
CCDC130-202ENST00000540216 KANK4Q5T7N3 995 aaPredicted RBP21.02■□□□□ 0.96
CCDC130-202ENST00000540216 ATP10AO60312 1499 aa21.01■□□□□ 0.95
CCDC130-202ENST00000540216 C9orf84Q5VXU9 1444 aa21■□□□□ 0.95
CCDC130-202ENST00000540216 ARID4BQ4LE39 1312 aaPredicted RBP20.98■□□□□ 0.95
CCDC130-202ENST00000540216 BCORL1Q5H9F3 1711 aa20.98■□□□□ 0.95
CCDC130-202ENST00000540216 DIP2CQ9Y2E4 1556 aa20.97■□□□□ 0.95
CCDC130-202ENST00000540216 REREQ9P2R6 1566 aa20.97■□□□□ 0.95
CCDC130-202ENST00000540216 ADAMTSL3P82987 1691 aa20.96■□□□□ 0.95
CCDC130-202ENST00000540216 HNRNPMP52272 730 aaKnown RBP eCLIP20.96■□□□□ 0.95
CCDC130-202ENST00000540216 MYT1LQ9UL68 1186 aa20.96■□□□□ 0.95
CCDC130-202ENST00000540216 ABCA6Q8N139 1617 aa20.96■□□□□ 0.95
CCDC130-202ENST00000540216 MYOM3Q5VTT5 1437 aa20.95■□□□□ 0.95
CCDC130-202ENST00000540216 CAMSAP2Q08AD1 1489 aa20.95■□□□□ 0.94
CCDC130-202ENST00000540216 MBD5Q9P267 1494 aa20.95■□□□□ 0.94
CCDC130-202ENST00000540216 KIDINS220Q9ULH0 1771 aa20.95■□□□□ 0.94
CCDC130-202ENST00000540216 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.94
CCDC130-202ENST00000540216 MIA2Q96PC5 1412 aa20.95■□□□□ 0.94
CCDC130-202ENST00000540216 SPAG9O60271 1321 aaKnown RBP20.94■□□□□ 0.94
CCDC130-202ENST00000540216 INO80Q9ULG1 1556 aaPredicted RBP20.93■□□□□ 0.94
CCDC130-202ENST00000540216 ATP7AQ04656 1500 aa20.93■□□□□ 0.94
CCDC130-202ENST00000540216 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
CCDC130-202ENST00000540216 RSPH4AQ5TD94 716 aa20.91■□□□□ 0.94
CCDC130-202ENST00000540216 CCDC141Q6ZP82 1450 aa20.91■□□□□ 0.94
CCDC130-202ENST00000540216 ARHGEF5Q12774 1597 aa20.89■□□□□ 0.94
CCDC130-202ENST00000540216 AGLP35573 1532 aa20.88■□□□□ 0.93
CCDC130-202ENST00000540216 MADDQ8WXG6 1647 aa20.88■□□□□ 0.93
CCDC130-202ENST00000540216 RTEL1-TNFRSF6BF6WH68 1400 aa20.87■□□□□ 0.93
CCDC130-202ENST00000540216 PTPRMP28827 1452 aa20.84■□□□□ 0.93
CCDC130-202ENST00000540216 ADGBQ8N7X0 1667 aa20.83■□□□□ 0.92
CCDC130-202ENST00000540216 FGD6Q6ZV73 1430 aa20.82■□□□□ 0.92
CCDC130-202ENST00000540216 PTPN23Q9H3S7 1636 aa20.82■□□□□ 0.92
CCDC130-202ENST00000540216 A2MP01023 1474 aa20.81■□□□□ 0.92
CCDC130-202ENST00000540216 PLXNC1O60486 1568 aa20.81■□□□□ 0.92
CCDC130-202ENST00000540216 RIMS1Q86UR5 1692 aaKnown RBP20.81■□□□□ 0.92
CCDC130-202ENST00000540216 FER1L4A9Z1Z3 1794 aa20.81■□□□□ 0.92
CCDC130-202ENST00000540216 TSPY4P0CV99 314 aa20.79■□□□□ 0.92
CCDC130-202ENST00000540216 TSPY10P0CW01 314 aa20.79■□□□□ 0.92
CCDC130-202ENST00000540216 MLECQ14165 292 aa20.79■□□□□ 0.92
CCDC130-202ENST00000540216 TCOF1Q13428 1488 aaKnown RBP20.79■□□□□ 0.92
CCDC130-202ENST00000540216 MAST1Q9Y2H9 1570 aa20.79■□□□□ 0.92
CCDC130-202ENST00000540216 SHANK2Q9UPX8 1470 aa20.74■□□□□ 0.91
CCDC130-202ENST00000540216 DHX29Q7Z478 1369 aaKnown RBP20.73■□□□□ 0.91
CCDC130-202ENST00000540216 DNMT1P26358 1616 aaKnown RBP20.72■□□□□ 0.91
CCDC130-202ENST00000540216 CROCC2H7BZ55 1655 aa20.72■□□□□ 0.91
CCDC130-202ENST00000540216 CNTLNQ9NXG0 1405 aa20.71■□□□□ 0.91
CCDC130-202ENST00000540216 ABCC5O15440 1437 aa20.7■□□□□ 0.9
CCDC130-202ENST00000540216 DAPK1P53355 1430 aa20.7■□□□□ 0.9
CCDC130-202ENST00000540216 ESF1Q9H501 851 aaKnown RBP20.69■□□□□ 0.9
CCDC130-202ENST00000540216 PPP6R1Q9UPN7 881 aa20.67■□□□□ 0.9
CCDC130-202ENST00000540216 MROH2AA6NES4 1674 aa20.65■□□□□ 0.9
CCDC130-202ENST00000540216 FAM135AQ9P2D6 1515 aa20.65■□□□□ 0.9
CCDC130-202ENST00000540216 EIF2AK4Q9P2K8 1649 aaKnown RBP20.64■□□□□ 0.89
CCDC130-202ENST00000540216 DUOX2Q9NRD8 1548 aa20.63■□□□□ 0.89
CCDC130-202ENST00000540216 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
CCDC130-202ENST00000540216 C3P01024 1663 aa20.61■□□□□ 0.89
CCDC130-202ENST00000540216 KIF3BO15066 747 aa20.61■□□□□ 0.89
CCDC130-202ENST00000540216 GGT6Q6P531 493 aa20.61■□□□□ 0.89
CCDC130-202ENST00000540216 KIF15Q9NS87 1388 aa20.6■□□□□ 0.89
CCDC130-202ENST00000540216 ANKRD30AQ9BXX3 1397 aa20.59■□□□□ 0.89
CCDC130-202ENST00000540216 RNF17Q9BXT8 1623 aaKnown RBP20.59■□□□□ 0.89
CCDC130-202ENST00000540216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.59■□□□□ 0.89
CCDC130-202ENST00000540216 CLTCQ00610 1675 aaKnown RBP20.58■□□□□ 0.89
CCDC130-202ENST00000540216 ADGRL2O95490 1459 aa20.58■□□□□ 0.89
CCDC130-202ENST00000540216 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.89
CCDC130-202ENST00000540216 ERBINQ96RT1 1412 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms