RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 CDC42BPAQ5VT25 1732 aa17.31■□□□□ 0.36
SLC3A2-215ENST00000539891 ARHGAP5Q13017 1502 aa17.31■□□□□ 0.36
SLC3A2-215ENST00000539891 ZMYM4Q5VZL5 1548 aa17.31■□□□□ 0.36
SLC3A2-215ENST00000539891 SCAPERQ9BY12 1400 aa17.29■□□□□ 0.36
SLC3A2-215ENST00000539891 POGZQ7Z3K3 1410 aa17.27■□□□□ 0.36
SLC3A2-215ENST00000539891 MAGI2Q86UL8 1455 aa17.27■□□□□ 0.35
SLC3A2-215ENST00000539891 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
SLC3A2-215ENST00000539891 VPS8Q8N3P4 1428 aa17.26■□□□□ 0.35
SLC3A2-215ENST00000539891 EHBP1L1Q8N3D4 1523 aa17.25■□□□□ 0.35
SLC3A2-215ENST00000539891 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
SLC3A2-215ENST00000539891 GPATCH8Q9UKJ3 1502 aaKnown RBP17.23■□□□□ 0.35
SLC3A2-215ENST00000539891 ZNF518AQ6AHZ1 1483 aa17.23■□□□□ 0.35
SLC3A2-215ENST00000539891 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
SLC3A2-215ENST00000539891 ABCC1P33527 1531 aa17.22■□□□□ 0.35
SLC3A2-215ENST00000539891 KDM5CP41229 1560 aa17.22■□□□□ 0.35
SLC3A2-215ENST00000539891 ITSN2Q9NZM3 1697 aa17.21■□□□□ 0.35
SLC3A2-215ENST00000539891 TIAM1Q13009 1591 aa17.21■□□□□ 0.35
SLC3A2-215ENST00000539891 YEATS2Q9ULM3 1422 aa17.19■□□□□ 0.34
SLC3A2-215ENST00000539891 ADAMTSL3P82987 1691 aa17.19■□□□□ 0.34
SLC3A2-215ENST00000539891 BCORL1Q5H9F3 1711 aa17.19■□□□□ 0.34
SLC3A2-215ENST00000539891 CCNB3Q8WWL7 1395 aa17.19■□□□□ 0.34
SLC3A2-215ENST00000539891 MAP3K1Q13233 1512 aa17.18■□□□□ 0.34
SLC3A2-215ENST00000539891 ARHGEF12Q9NZN5 1544 aa17.18■□□□□ 0.34
SLC3A2-215ENST00000539891 SAMD9LQ8IVG5 1584 aa17.18■□□□□ 0.34
SLC3A2-215ENST00000539891 SUPT6HQ7KZ85 1726 aaKnown RBP17.17■□□□□ 0.34
SLC3A2-215ENST00000539891 SIGLEC1Q9BZZ2 1709 aa17.16■□□□□ 0.34
SLC3A2-215ENST00000539891 HECW2Q9P2P5 1572 aa17.16■□□□□ 0.34
SLC3A2-215ENST00000539891 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
SLC3A2-215ENST00000539891 MLH3Q9UHC1 1453 aa17.15■□□□□ 0.34
SLC3A2-215ENST00000539891 TRAPPC8Q9Y2L5 1435 aa17.15■□□□□ 0.34
SLC3A2-215ENST00000539891 ATP10AO60312 1499 aa17.14■□□□□ 0.33
SLC3A2-215ENST00000539891 KIAA1107Q9UPP5 1409 aa17.14■□□□□ 0.33
SLC3A2-215ENST00000539891 CFDP1Q9UEE9 299 aaPredicted RBP17.14■□□□□ 0.33
SLC3A2-215ENST00000539891 PLEKHH2Q8IVE3 1493 aa17.13■□□□□ 0.33
SLC3A2-215ENST00000539891 LRRC9Q6ZRR7 1453 aa17.13■□□□□ 0.33
SLC3A2-215ENST00000539891 C9orf84Q5VXU9 1444 aa17.12■□□□□ 0.33
SLC3A2-215ENST00000539891 ARID4BQ4LE39 1312 aaPredicted RBP17.12■□□□□ 0.33
SLC3A2-215ENST00000539891 SYCP2Q9BX26 1530 aa17.12■□□□□ 0.33
SLC3A2-215ENST00000539891 ZNF777Q9ULD5 760 aaPredicted RBP17.12■□□□□ 0.33
SLC3A2-215ENST00000539891 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
SLC3A2-215ENST00000539891 KIDINS220Q9ULH0 1771 aa17.11■□□□□ 0.33
SLC3A2-215ENST00000539891 REREQ9P2R6 1566 aa17.11■□□□□ 0.33
SLC3A2-215ENST00000539891 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
SLC3A2-215ENST00000539891 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
SLC3A2-215ENST00000539891 MADDQ8WXG6 1647 aa17.1■□□□□ 0.33
SLC3A2-215ENST00000539891 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.321e-20■□□□□ 11
SLC3A2-215ENST00000539891 PTPRMP28827 1452 aa17.07■□□□□ 0.32
SLC3A2-215ENST00000539891 RIMS1Q86UR5 1692 aaKnown RBP17.05■□□□□ 0.32
SLC3A2-215ENST00000539891 MBD5Q9P267 1494 aa17.05■□□□□ 0.32
SLC3A2-215ENST00000539891 KANK4Q5T7N3 995 aaPredicted RBP17.05■□□□□ 0.32
SLC3A2-215ENST00000539891 INO80Q9ULG1 1556 aaPredicted RBP17.04■□□□□ 0.32
SLC3A2-215ENST00000539891 MYT1LQ9UL68 1186 aa17.04■□□□□ 0.32
SLC3A2-215ENST00000539891 AGLP35573 1532 aa17.04■□□□□ 0.32
SLC3A2-215ENST00000539891 FER1L4A9Z1Z3 1794 aa17.04■□□□□ 0.32
SLC3A2-215ENST00000539891 ZNF644Q9H582 1327 aaPredicted RBP17.04■□□□□ 0.32
SLC3A2-215ENST00000539891 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
SLC3A2-215ENST00000539891 SPAG9O60271 1321 aaKnown RBP17.03■□□□□ 0.32
SLC3A2-215ENST00000539891 CAMSAP2Q08AD1 1489 aa17.02■□□□□ 0.31
SLC3A2-215ENST00000539891 APLP2Q06481 763 aa17■□□□□ 0.31
SLC3A2-215ENST00000539891 MLECQ14165 292 aa16.98■□□□□ 0.31
SLC3A2-215ENST00000539891 RSPH4AQ5TD94 716 aa16.98■□□□□ 0.31
SLC3A2-215ENST00000539891 ARHGEF5Q12774 1597 aa16.98■□□□□ 0.31
SLC3A2-215ENST00000539891 ADGBQ8N7X0 1667 aa16.98■□□□□ 0.31
SLC3A2-215ENST00000539891 RTEL1-TNFRSF6BF6WH68 1400 aa16.98■□□□□ 0.31
SLC3A2-215ENST00000539891 MYOM3Q5VTT5 1437 aa16.98■□□□□ 0.31
SLC3A2-215ENST00000539891 MIA2Q96PC5 1412 aa16.98■□□□□ 0.31
SLC3A2-215ENST00000539891 CCDC141Q6ZP82 1450 aa16.97■□□□□ 0.31
SLC3A2-215ENST00000539891 PLXNC1O60486 1568 aa16.97■□□□□ 0.31
SLC3A2-215ENST00000539891 A2MP01023 1474 aa16.94■□□□□ 0.3
SLC3A2-215ENST00000539891 SETD1BQ9UPS6 1966 aaKnown RBP16.91■□□□□ 0.3
SLC3A2-215ENST00000539891 MAST1Q9Y2H9 1570 aa16.9■□□□□ 0.3
SLC3A2-215ENST00000539891 DHX29Q7Z478 1369 aaKnown RBP16.88■□□□□ 0.29
SLC3A2-215ENST00000539891 PTPN23Q9H3S7 1636 aa16.88■□□□□ 0.29
SLC3A2-215ENST00000539891 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
SLC3A2-215ENST00000539891 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
SLC3A2-215ENST00000539891 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
SLC3A2-215ENST00000539891 C3P01024 1663 aa16.88■□□□□ 0.29
SLC3A2-215ENST00000539891 CNTLNQ9NXG0 1405 aa16.88■□□□□ 0.29
SLC3A2-215ENST00000539891 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
SLC3A2-215ENST00000539891 FGD6Q6ZV73 1430 aa16.86■□□□□ 0.29
SLC3A2-215ENST00000539891 TCOF1Q13428 1488 aaKnown RBP16.85■□□□□ 0.29
SLC3A2-215ENST00000539891 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
SLC3A2-215ENST00000539891 CROCC2H7BZ55 1655 aa16.85■□□□□ 0.29
SLC3A2-215ENST00000539891 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
SLC3A2-215ENST00000539891 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
SLC3A2-215ENST00000539891 CEBPAP49715 358 aaPredicted RBP16.83■□□□□ 0.28
SLC3A2-215ENST00000539891 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
SLC3A2-215ENST00000539891 CLTCQ00610 1675 aaKnown RBP16.82■□□□□ 0.28
SLC3A2-215ENST00000539891 DNMT1P26358 1616 aaKnown RBP16.82■□□□□ 0.28
SLC3A2-215ENST00000539891 SHANK2Q9UPX8 1470 aa16.82■□□□□ 0.28
SLC3A2-215ENST00000539891 ABCC5O15440 1437 aa16.8■□□□□ 0.28
SLC3A2-215ENST00000539891 GGT6Q6P531 493 aa16.79■□□□□ 0.28
SLC3A2-215ENST00000539891 FAM135AQ9P2D6 1515 aa16.79■□□□□ 0.28
SLC3A2-215ENST00000539891 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
SLC3A2-215ENST00000539891 EIF2AK4Q9P2K8 1649 aaKnown RBP16.78■□□□□ 0.28
SLC3A2-215ENST00000539891 DAPK1P53355 1430 aa16.78■□□□□ 0.28
SLC3A2-215ENST00000539891 KIF3BO15066 747 aa16.77■□□□□ 0.28
SLC3A2-215ENST00000539891 RNF17Q9BXT8 1623 aaKnown RBP16.77■□□□□ 0.27
SLC3A2-215ENST00000539891 NPATQ14207 1427 aa16.76■□□□□ 0.27
SLC3A2-215ENST00000539891 DUOX2Q9NRD8 1548 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms