RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TSPOAP1O95153 1857 aa23.71■■□□□ 1.39
DDB1-216ENST00000539739 ITSN2Q9NZM3 1697 aa23.7■■□□□ 1.39
DDB1-216ENST00000539739 PREX2Q70Z35 1606 aa23.7■■□□□ 1.38
DDB1-216ENST00000539739 FANCAO15360 1455 aa23.69■■□□□ 1.38
DDB1-216ENST00000539739 ZNF777Q9ULD5 760 aaPredicted RBP23.68■■□□□ 1.38
DDB1-216ENST00000539739 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
DDB1-216ENST00000539739 CDC42BPBQ9Y5S2 1711 aa23.67■■□□□ 1.38
DDB1-216ENST00000539739 NEO1Q92859 1461 aa23.65■■□□□ 1.38
DDB1-216ENST00000539739 CFAP74Q9C0B2 1584 aa23.64■■□□□ 1.38
DDB1-216ENST00000539739 PPRC1Q5VV67 1664 aaKnown RBP23.64■■□□□ 1.37
DDB1-216ENST00000539739 FGD6Q6ZV73 1430 aa23.64■■□□□ 1.37
DDB1-216ENST00000539739 AKNAQ7Z591 1439 aa23.62■■□□□ 1.37
DDB1-216ENST00000539739 ZNF644Q9H582 1327 aaPredicted RBP23.59■■□□□ 1.37
DDB1-216ENST00000539739 PLEKHH2Q8IVE3 1493 aa23.58■■□□□ 1.37
DDB1-216ENST00000539739 ADGRL1O94910 1474 aa23.58■■□□□ 1.36
DDB1-216ENST00000539739 FAM50AQ14320 339 aaKnown RBP23.56■■□□□ 1.36
DDB1-216ENST00000539739 CAMSAP2Q08AD1 1489 aa23.56■■□□□ 1.36
DDB1-216ENST00000539739 PTPN23Q9H3S7 1636 aa23.56■■□□□ 1.36
DDB1-216ENST00000539739 SAMD9LQ8IVG5 1584 aa23.56■■□□□ 1.36
DDB1-216ENST00000539739 SCAPERQ9BY12 1400 aa23.55■■□□□ 1.36
DDB1-216ENST00000539739 KIAA1107Q9UPP5 1409 aa23.55■■□□□ 1.36
DDB1-216ENST00000539739 TCOF1Q13428 1488 aaKnown RBP23.53■■□□□ 1.36
DDB1-216ENST00000539739 RRBP1Q9P2E9 1410 aaKnown RBP23.53■■□□□ 1.36
DDB1-216ENST00000539739 ABCC1P33527 1531 aa23.52■■□□□ 1.36
DDB1-216ENST00000539739 HNRNPMP52272 730 aaKnown RBP eCLIP23.52■■□□□ 1.36
DDB1-216ENST00000539739 RSPH4AQ5TD94 716 aa23.51■■□□□ 1.35
DDB1-216ENST00000539739 DENND4BO75064 1496 aaPredicted RBP23.5■■□□□ 1.35
DDB1-216ENST00000539739 SYCP2Q9BX26 1530 aa23.5■■□□□ 1.35
DDB1-216ENST00000539739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.49■■□□□ 1.35
DDB1-216ENST00000539739 ARHGEF12Q9NZN5 1544 aa23.47■■□□□ 1.35
DDB1-216ENST00000539739 MBD5Q9P267 1494 aa23.47■■□□□ 1.35
DDB1-216ENST00000539739 RAPGEF3O95398 923 aa23.46■■□□□ 1.35
DDB1-216ENST00000539739 POGZQ7Z3K3 1410 aa23.45■■□□□ 1.34
DDB1-216ENST00000539739 ZNF518AQ6AHZ1 1483 aa23.45■■□□□ 1.34
DDB1-216ENST00000539739 AFAP1Q8N556 730 aa23.44■■□□□ 1.34
DDB1-216ENST00000539739 TRAPPC8Q9Y2L5 1435 aa23.44■■□□□ 1.34
DDB1-216ENST00000539739 TSPY4P0CV99 314 aa23.44■■□□□ 1.34
DDB1-216ENST00000539739 TSPY10P0CW01 314 aa23.44■■□□□ 1.34
DDB1-216ENST00000539739 COL17A1Q9UMD9 1497 aaPredicted RBP23.43■■□□□ 1.34
DDB1-216ENST00000539739 ARHGEF5Q12774 1597 aa23.43■■□□□ 1.34
DDB1-216ENST00000539739 KDM6BO15054 1643 aa23.43■■□□□ 1.34
DDB1-216ENST00000539739 CCDC141Q6ZP82 1450 aa23.43■■□□□ 1.34
DDB1-216ENST00000539739 MYT1LQ9UL68 1186 aa23.4■■□□□ 1.34
DDB1-216ENST00000539739 DAPK1P53355 1430 aa23.39■■□□□ 1.34
DDB1-216ENST00000539739 ITGAEP38570 1179 aa23.39■■□□□ 1.33
DDB1-216ENST00000539739 ABCC5O15440 1437 aa23.38■■□□□ 1.33
DDB1-216ENST00000539739 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
DDB1-216ENST00000539739 RICTORQ6R327 1708 aa23.38■■□□□ 1.33
DDB1-216ENST00000539739 DNMT1P26358 1616 aaKnown RBP23.38■■□□□ 1.33
DDB1-216ENST00000539739 KDM5CP41229 1560 aa23.35■■□□□ 1.33
DDB1-216ENST00000539739 TRIM26Q12899 539 aaPredicted RBP23.34■■□□□ 1.33
DDB1-216ENST00000539739 FRMPD1Q5SYB0 1578 aa23.34■■□□□ 1.33
DDB1-216ENST00000539739 C9orf84Q5VXU9 1444 aa23.33■■□□□ 1.33
DDB1-216ENST00000539739 SHANK2Q9UPX8 1470 aa23.32■■□□□ 1.32
DDB1-216ENST00000539739 CHIC2Q9UKJ5 165 aa23.32■■□□□ 1.32
DDB1-216ENST00000539739 MAGI2Q86UL8 1455 aa23.32■■□□□ 1.32
DDB1-216ENST00000539739 MLH3Q9UHC1 1453 aa23.32■■□□□ 1.32
DDB1-216ENST00000539739 RTEL1-TNFRSF6BF6WH68 1400 aa23.31■■□□□ 1.32
DDB1-216ENST00000539739 ZMYM4Q5VZL5 1548 aa23.31■■□□□ 1.32
DDB1-216ENST00000539739 PELP1Q8IZL8 1130 aaKnown RBP23.3■■□□□ 1.32
DDB1-216ENST00000539739 CROCC2H7BZ55 1655 aa23.29■■□□□ 1.32
DDB1-216ENST00000539739 HECW2Q9P2P5 1572 aa23.29■■□□□ 1.32
DDB1-216ENST00000539739 PTPRKQ15262 1439 aa23.28■■□□□ 1.32
DDB1-216ENST00000539739 MAST1Q9Y2H9 1570 aa23.28■■□□□ 1.32
DDB1-216ENST00000539739 ATP7AQ04656 1500 aa23.27■■□□□ 1.32
DDB1-216ENST00000539739 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.32
DDB1-216ENST00000539739 ZFYVE16Q7Z3T8 1539 aa23.25■■□□□ 1.31
DDB1-216ENST00000539739 INO80Q9ULG1 1556 aaPredicted RBP23.25■■□□□ 1.31
DDB1-216ENST00000539739 KIDINS220Q9ULH0 1771 aa23.24■■□□□ 1.31
DDB1-216ENST00000539739 ROCK1Q13464 1354 aa23.23■■□□□ 1.31
DDB1-216ENST00000539739 YEATS2Q9ULM3 1422 aa23.23■■□□□ 1.31
DDB1-216ENST00000539739 ADGRL2O95490 1459 aa23.23■■□□□ 1.31
DDB1-216ENST00000539739 RRP7BPQ9NSQ0 103 aa23.22■■□□□ 1.31
DDB1-216ENST00000539739 NCOA1Q15788 1441 aa23.22■■□□□ 1.31
DDB1-216ENST00000539739 ADGBQ8N7X0 1667 aa23.2■■□□□ 1.3
DDB1-216ENST00000539739 KIF15Q9NS87 1388 aa23.19■■□□□ 1.3
DDB1-216ENST00000539739 PLXNC1O60486 1568 aa23.19■■□□□ 1.3
DDB1-216ENST00000539739 ATP10AO60312 1499 aa23.19■■□□□ 1.3
DDB1-216ENST00000539739 ARHGEF40Q8TER5 1519 aa23.18■■□□□ 1.3
DDB1-216ENST00000539739 DIP2CQ9Y2E4 1556 aa23.17■■□□□ 1.3
DDB1-216ENST00000539739 ABCA6Q8N139 1617 aa23.17■■□□□ 1.3
DDB1-216ENST00000539739 DHX29Q7Z478 1369 aaKnown RBP23.15■■□□□ 1.3
DDB1-216ENST00000539739 A2MP01023 1474 aa23.15■■□□□ 1.3
DDB1-216ENST00000539739 DUOX2Q9NRD8 1548 aa23.14■■□□□ 1.29
DDB1-216ENST00000539739 HFM1A2PYH4 1435 aa23.12■■□□□ 1.29
DDB1-216ENST00000539739 REREQ9P2R6 1566 aa23.09■■□□□ 1.29
DDB1-216ENST00000539739 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
DDB1-216ENST00000539739 NAIPQ13075 1403 aa23.09■■□□□ 1.29
DDB1-216ENST00000539739 ERBINQ96RT1 1412 aa23.09■■□□□ 1.29
DDB1-216ENST00000539739 ANKRD50Q9ULJ7 1429 aa23.09■■□□□ 1.29
DDB1-216ENST00000539739 ARID4BQ4LE39 1312 aaPredicted RBP23.07■■□□□ 1.28
DDB1-216ENST00000539739 KIF3BO15066 747 aa23.05■■□□□ 1.28
DDB1-216ENST00000539739 SETD5Q9C0A6 1442 aa23.05■■□□□ 1.28
DDB1-216ENST00000539739 AGLP35573 1532 aa23.03■■□□□ 1.28
DDB1-216ENST00000539739 GCC2Q8IWJ2 1684 aa23.03■■□□□ 1.28
DDB1-216ENST00000539739 EIF2AK4Q9P2K8 1649 aaKnown RBP23.01■■□□□ 1.27
DDB1-216ENST00000539739 MYT1Q01538 1121 aa23■■□□□ 1.27
DDB1-216ENST00000539739 GGT6Q6P531 493 aa22.99■■□□□ 1.27
DDB1-216ENST00000539739 ACIN1Q9UKV3 1341 aaKnown RBP22.97■■□□□ 1.27
DDB1-216ENST00000539739 RAB3GAP2Q9H2M9 1393 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms