RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 CAMSAP2Q08AD1 1489 aa24.44■■□□□ 1.5
TRAF3-204ENST00000539721 DNAJC5Q9H3Z4 198 aa24.44■■□□□ 1.5
TRAF3-204ENST00000539721 ARHGAP5Q13017 1502 aa24.43■■□□□ 1.5
TRAF3-204ENST00000539721 ZNF777Q9ULD5 760 aaPredicted RBP24.42■■□□□ 1.5
TRAF3-204ENST00000539721 PLCH2O75038 1416 aa24.41■■□□□ 1.5
TRAF3-204ENST00000539721 ZNF644Q9H582 1327 aaPredicted RBP24.4■■□□□ 1.5
TRAF3-204ENST00000539721 ARAP3Q8WWN8 1544 aa24.38■■□□□ 1.49
TRAF3-204ENST00000539721 SAMD9LQ8IVG5 1584 aa24.37■■□□□ 1.49
TRAF3-204ENST00000539721 DNMT1P26358 1616 aaKnown RBP24.36■■□□□ 1.49
TRAF3-204ENST00000539721 GLI2P10070 1586 aa24.33■■□□□ 1.49
TRAF3-204ENST00000539721 DIP2BQ9P265 1576 aa24.33■■□□□ 1.49
TRAF3-204ENST00000539721 EFCAB2Q5VUJ9 269 aa24.31■■□□□ 1.48
TRAF3-204ENST00000539721 DAPK1P53355 1430 aa24.31■■□□□ 1.48
TRAF3-204ENST00000539721 CD109Q6YHK3 1445 aa24.31■■□□□ 1.48
TRAF3-204ENST00000539721 PTPRKQ15262 1439 aa24.3■■□□□ 1.48
TRAF3-204ENST00000539721 MAP3K4Q9Y6R4 1608 aa24.29■■□□□ 1.48
TRAF3-204ENST00000539721 PLEKHH2Q8IVE3 1493 aa24.29■■□□□ 1.48
TRAF3-204ENST00000539721 CROCC2H7BZ55 1655 aa24.29■■□□□ 1.48
TRAF3-204ENST00000539721 FANCAO15360 1455 aa24.28■■□□□ 1.48
TRAF3-204ENST00000539721 ABCC5O15440 1437 aa24.28■■□□□ 1.48
TRAF3-204ENST00000539721 SYCP2Q9BX26 1530 aa24.27■■□□□ 1.48
TRAF3-204ENST00000539721 ARHGEF5Q12774 1597 aa24.27■■□□□ 1.48
TRAF3-204ENST00000539721 ABCC1P33527 1531 aa24.26■■□□□ 1.47
TRAF3-204ENST00000539721 CFAP74Q9C0B2 1584 aa24.25■■□□□ 1.47
TRAF3-204ENST00000539721 FAM69CQ0P6D2 419 aa24.25■■□□□ 1.47
TRAF3-204ENST00000539721 MBD5Q9P267 1494 aa24.24■■□□□ 1.47
TRAF3-204ENST00000539721 KIAA1107Q9UPP5 1409 aa24.24■■□□□ 1.47
TRAF3-204ENST00000539721 HNRNPMP52272 730 aaKnown RBP eCLIP24.24■■□□□ 1.474e-6■■■■□ 21.4
TRAF3-204ENST00000539721 KIF13AQ9H1H9 1805 aa24.23■■□□□ 1.47
TRAF3-204ENST00000539721 CHIC2Q9UKJ5 165 aa24.22■■□□□ 1.47
TRAF3-204ENST00000539721 ADGBQ8N7X0 1667 aa24.22■■□□□ 1.47
TRAF3-204ENST00000539721 CCDC141Q6ZP82 1450 aa24.22■■□□□ 1.47
TRAF3-204ENST00000539721 ARHGEF12Q9NZN5 1544 aa24.2■■□□□ 1.46
TRAF3-204ENST00000539721 SHANK2Q9UPX8 1470 aa24.19■■□□□ 1.46
TRAF3-204ENST00000539721 RSPH4AQ5TD94 716 aa24.19■■□□□ 1.46
TRAF3-204ENST00000539721 AKNAQ7Z591 1439 aa24.18■■□□□ 1.46
TRAF3-204ENST00000539721 ADGRL1O94910 1474 aa24.18■■□□□ 1.46
TRAF3-204ENST00000539721 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
TRAF3-204ENST00000539721 TSPOAP1O95153 1857 aa24.17■■□□□ 1.46
TRAF3-204ENST00000539721 GCC2Q8IWJ2 1684 aa24.16■■□□□ 1.46
TRAF3-204ENST00000539721 HFM1A2PYH4 1435 aa24.16■■□□□ 1.46
TRAF3-204ENST00000539721 C9orf84Q5VXU9 1444 aa24.15■■□□□ 1.46
TRAF3-204ENST00000539721 ROCK1Q13464 1354 aa24.15■■□□□ 1.46
TRAF3-204ENST00000539721 TSPY4P0CV99 314 aa24.15■■□□□ 1.46
TRAF3-204ENST00000539721 TSPY10P0CW01 314 aa24.15■■□□□ 1.46
TRAF3-204ENST00000539721 NEO1Q92859 1461 aa24.15■■□□□ 1.46
TRAF3-204ENST00000539721 ADGRL2O95490 1459 aa24.13■■□□□ 1.45
TRAF3-204ENST00000539721 PPRC1Q5VV67 1664 aaKnown RBP24.13■■□□□ 1.45
TRAF3-204ENST00000539721 RRP7BPQ9NSQ0 103 aa24.13■■□□□ 1.45
TRAF3-204ENST00000539721 NAIPQ13075 1403 aa24.13■■□□□ 1.45
TRAF3-204ENST00000539721 SCAPERQ9BY12 1400 aa24.13■■□□□ 1.45
TRAF3-204ENST00000539721 RAB3GAP2Q9H2M9 1393 aa24.13■■□□□ 1.45
TRAF3-204ENST00000539721 TRAPPC8Q9Y2L5 1435 aa24.12■■□□□ 1.45
TRAF3-204ENST00000539721 MAST1Q9Y2H9 1570 aa24.12■■□□□ 1.45
TRAF3-204ENST00000539721 ANKRD30AQ9BXX3 1397 aa24.1■■□□□ 1.45
TRAF3-204ENST00000539721 NCOA1Q15788 1441 aa24.09■■□□□ 1.45
TRAF3-204ENST00000539721 TEX14Q8IWB6 1497 aa24.09■■□□□ 1.45
TRAF3-204ENST00000539721 AFAP1Q8N556 730 aa24.04■■□□□ 1.44
TRAF3-204ENST00000539721 ZNF518AQ6AHZ1 1483 aa24.04■■□□□ 1.44
TRAF3-204ENST00000539721 PLXNC1O60486 1568 aa24.03■■□□□ 1.44
TRAF3-204ENST00000539721 POGZQ7Z3K3 1410 aa24.02■■□□□ 1.44
TRAF3-204ENST00000539721 HRCP23327 699 aa24.02■■□□□ 1.44
TRAF3-204ENST00000539721 SPAG9O60271 1321 aaKnown RBP24.02■■□□□ 1.44
TRAF3-204ENST00000539721 KDM6BO15054 1643 aa24.01■■□□□ 1.43
TRAF3-204ENST00000539721 DENND4BO75064 1496 aaPredicted RBP24.01■■□□□ 1.43
TRAF3-204ENST00000539721 ZFYVE16Q7Z3T8 1539 aa24■■□□□ 1.43
TRAF3-204ENST00000539721 INO80Q9ULG1 1556 aaPredicted RBP24■■□□□ 1.43
TRAF3-204ENST00000539721 KIF15Q9NS87 1388 aa24■■□□□ 1.43
TRAF3-204ENST00000539721 RTEL1-TNFRSF6BF6WH68 1400 aa23.99■■□□□ 1.43
TRAF3-204ENST00000539721 KDM5CP41229 1560 aa23.99■■□□□ 1.43
TRAF3-204ENST00000539721 ATP7AQ04656 1500 aa23.99■■□□□ 1.43
TRAF3-204ENST00000539721 CCER1Q8TC90 406 aaPredicted RBP23.98■■□□□ 1.43
TRAF3-204ENST00000539721 RICTORQ6R327 1708 aa23.98■■□□□ 1.43
TRAF3-204ENST00000539721 TRHP20396 242 aaPredicted RBP23.97■■□□□ 1.43
TRAF3-204ENST00000539721 ANKRD50Q9ULJ7 1429 aa23.95■■□□□ 1.42
TRAF3-204ENST00000539721 MYT1LQ9UL68 1186 aa23.94■■□□□ 1.42
TRAF3-204ENST00000539721 KIDINS220Q9ULH0 1771 aa23.94■■□□□ 1.42
TRAF3-204ENST00000539721 HECW2Q9P2P5 1572 aa23.94■■□□□ 1.42
TRAF3-204ENST00000539721 DUOX2Q9NRD8 1548 aa23.93■■□□□ 1.42
TRAF3-204ENST00000539721 RAPGEF3O95398 923 aa23.92■■□□□ 1.42
TRAF3-204ENST00000539721 DHX57Q6P158 1386 aaKnown RBP23.92■■□□□ 1.42
TRAF3-204ENST00000539721 FRMPD1Q5SYB0 1578 aa23.91■■□□□ 1.42
TRAF3-204ENST00000539721 MLH3Q9UHC1 1453 aa23.91■■□□□ 1.42
TRAF3-204ENST00000539721 ACIN1Q9UKV3 1341 aaKnown RBP23.88■■□□□ 1.41
TRAF3-204ENST00000539721 ERBINQ96RT1 1412 aa23.86■■□□□ 1.41
TRAF3-204ENST00000539721 TRIM52Q96A61 297 aa23.86■■□□□ 1.41
TRAF3-204ENST00000539721 ZMYM4Q5VZL5 1548 aa23.85■■□□□ 1.41
TRAF3-204ENST00000539721 ABCA6Q8N139 1617 aa23.84■■□□□ 1.41
TRAF3-204ENST00000539721 COL17A1Q9UMD9 1497 aaPredicted RBP23.81■■□□□ 1.4
TRAF3-204ENST00000539721 DIP2CQ9Y2E4 1556 aa23.8■■□□□ 1.4
TRAF3-204ENST00000539721 DHX29Q7Z478 1369 aaKnown RBP23.79■■□□□ 1.4
TRAF3-204ENST00000539721 UNC13BO14795 1591 aa23.79■■□□□ 1.4
TRAF3-204ENST00000539721 EIF2AK4Q9P2K8 1649 aaKnown RBP23.78■■□□□ 1.4
TRAF3-204ENST00000539721 A2MP01023 1474 aa23.78■■□□□ 1.4
TRAF3-204ENST00000539721 MAGI2Q86UL8 1455 aa23.77■■□□□ 1.4
TRAF3-204ENST00000539721 YEATS2Q9ULM3 1422 aa23.75■■□□□ 1.39
TRAF3-204ENST00000539721 KDM5DQ9BY66 1539 aa23.75■■□□□ 1.39
TRAF3-204ENST00000539721 CLSPNQ9HAW4 1339 aa23.75■■□□□ 1.39
TRAF3-204ENST00000539721 NUP155O75694 1391 aa23.74■■□□□ 1.39
TRAF3-204ENST00000539721 PZPP20742 1482 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms