RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 ATP1B4Q9UN42 357 aaPredicted RBP18.01■□□□□ 0.47
DDB1-214ENST00000539426 POGZQ7Z3K3 1410 aa17.99■□□□□ 0.47
DDB1-214ENST00000539426 SCAPERQ9BY12 1400 aa17.99■□□□□ 0.47
DDB1-214ENST00000539426 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
DDB1-214ENST00000539426 MAGI2Q86UL8 1455 aa17.97■□□□□ 0.47
DDB1-214ENST00000539426 TROQ12816 1431 aaPredicted RBP17.96■□□□□ 0.47
DDB1-214ENST00000539426 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
DDB1-214ENST00000539426 CDK11AQ9UQ88 783 aaPredicted RBP17.93■□□□□ 0.46
DDB1-214ENST00000539426 FER1L4A9Z1Z3 1794 aa17.92■□□□□ 0.46
DDB1-214ENST00000539426 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
DDB1-214ENST00000539426 ARHGAP5Q13017 1502 aa17.91■□□□□ 0.46
DDB1-214ENST00000539426 CDC42BPBQ9Y5S2 1711 aa17.9■□□□□ 0.46
DDB1-214ENST00000539426 MLECQ14165 292 aa17.9■□□□□ 0.46
DDB1-214ENST00000539426 CLIP1P30622 1438 aa17.89■□□□□ 0.46
DDB1-214ENST00000539426 C9orf84Q5VXU9 1444 aa17.89■□□□□ 0.45
DDB1-214ENST00000539426 ATP10AO60312 1499 aa17.88■□□□□ 0.45
DDB1-214ENST00000539426 KDM5CP41229 1560 aa17.88■□□□□ 0.45
DDB1-214ENST00000539426 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
DDB1-214ENST00000539426 CASKIN1Q8WXD9 1431 aa17.88■□□□□ 0.45
DDB1-214ENST00000539426 ZNF518AQ6AHZ1 1483 aa17.87■□□□□ 0.45
DDB1-214ENST00000539426 ARHGEF12Q9NZN5 1544 aa17.87■□□□□ 0.45
DDB1-214ENST00000539426 PREX2Q70Z35 1606 aa17.86■□□□□ 0.45
DDB1-214ENST00000539426 CCDC18Q5T9S5 1454 aa17.85■□□□□ 0.45
DDB1-214ENST00000539426 HSPA2P54652 639 aa17.84■□□□□ 0.45
DDB1-214ENST00000539426 AFAP1Q8N556 730 aa17.84■□□□□ 0.45
DDB1-214ENST00000539426 DIP2CQ9Y2E4 1556 aa17.83■□□□□ 0.45
DDB1-214ENST00000539426 ABCC1P33527 1531 aa17.82■□□□□ 0.44
DDB1-214ENST00000539426 CDC42BPAQ5VT25 1732 aa17.82■□□□□ 0.44
DDB1-214ENST00000539426 ABCA6Q8N139 1617 aa17.82■□□□□ 0.44
DDB1-214ENST00000539426 ITSN2Q9NZM3 1697 aa17.81■□□□□ 0.44
DDB1-214ENST00000539426 FYCO1Q9BQS8 1478 aa17.81■□□□□ 0.44
DDB1-214ENST00000539426 TRAPPC8Q9Y2L5 1435 aa17.8■□□□□ 0.44
DDB1-214ENST00000539426 REREQ9P2R6 1566 aa17.79■□□□□ 0.44
DDB1-214ENST00000539426 MLH3Q9UHC1 1453 aa17.78■□□□□ 0.44
DDB1-214ENST00000539426 FBXO41Q8TF61 875 aa17.78■□□□□ 0.44
DDB1-214ENST00000539426 CEBPAP49715 358 aaPredicted RBP17.76■□□□□ 0.43
DDB1-214ENST00000539426 PREX1Q8TCU6 1659 aa17.76■□□□□ 0.43
DDB1-214ENST00000539426 MYT1LQ9UL68 1186 aa17.75■□□□□ 0.43
DDB1-214ENST00000539426 KIDINS220Q9ULH0 1771 aa17.75■□□□□ 0.43
DDB1-214ENST00000539426 SAMD9LQ8IVG5 1584 aa17.74■□□□□ 0.43
DDB1-214ENST00000539426 AGLP35573 1532 aa17.72■□□□□ 0.43
DDB1-214ENST00000539426 SETD1BQ9UPS6 1966 aaKnown RBP17.72■□□□□ 0.43
DDB1-214ENST00000539426 SYCP2Q9BX26 1530 aa17.71■□□□□ 0.43
DDB1-214ENST00000539426 GPATCH8Q9UKJ3 1502 aaKnown RBP17.71■□□□□ 0.43
DDB1-214ENST00000539426 C3P01024 1663 aa17.71■□□□□ 0.42
DDB1-214ENST00000539426 ZNF777Q9ULD5 760 aaPredicted RBP17.68■□□□□ 0.42
DDB1-214ENST00000539426 STRCQ7RTU9 1775 aa17.67■□□□□ 0.42
DDB1-214ENST00000539426 UHRF1BP1Q6BDS2 1440 aa17.65■□□□□ 0.42
DDB1-214ENST00000539426 HNRNPMP52272 730 aaKnown RBP eCLIP17.63■□□□□ 0.412e-7■■■■□ 25.2
DDB1-214ENST00000539426 SUPT6HQ7KZ85 1726 aaKnown RBP17.63■□□□□ 0.41
DDB1-214ENST00000539426 ATP7AQ04656 1500 aa17.62■□□□□ 0.41
DDB1-214ENST00000539426 INO80Q9ULG1 1556 aaPredicted RBP17.62■□□□□ 0.41
DDB1-214ENST00000539426 MTUS2Q5JR59 1369 aa17.62■□□□□ 0.41
DDB1-214ENST00000539426 CCNB3Q8WWL7 1395 aa17.62■□□□□ 0.41
DDB1-214ENST00000539426 KIAA1107Q9UPP5 1409 aa17.62■□□□□ 0.41
DDB1-214ENST00000539426 CFDP1Q9UEE9 299 aaPredicted RBP17.61■□□□□ 0.41
DDB1-214ENST00000539426 SPAG9O60271 1321 aaKnown RBP17.61■□□□□ 0.41
DDB1-214ENST00000539426 TIAM1Q13009 1591 aa17.61■□□□□ 0.41
DDB1-214ENST00000539426 CERKQ8TCT0 537 aa17.6■□□□□ 0.41
DDB1-214ENST00000539426 PLEKHH2Q8IVE3 1493 aa17.6■□□□□ 0.41
DDB1-214ENST00000539426 PLXNC1O60486 1568 aa17.6■□□□□ 0.41
DDB1-214ENST00000539426 CNTLNQ9NXG0 1405 aa17.59■□□□□ 0.41
DDB1-214ENST00000539426 ESF1Q9H501 851 aaKnown RBP17.59■□□□□ 0.41
DDB1-214ENST00000539426 MROH2AA6NES4 1674 aa17.58■□□□□ 0.41
DDB1-214ENST00000539426 EHBP1L1Q8N3D4 1523 aa17.58■□□□□ 0.41
DDB1-214ENST00000539426 CEP162Q5TB80 1403 aa17.57■□□□□ 0.4
DDB1-214ENST00000539426 CLTCQ00610 1675 aaKnown RBP17.55■□□□□ 0.4
DDB1-214ENST00000539426 ZNF644Q9H582 1327 aaPredicted RBP17.55■□□□□ 0.4
DDB1-214ENST00000539426 A2MP01023 1474 aa17.55■□□□□ 0.4
DDB1-214ENST00000539426 MBD5Q9P267 1494 aa17.54■□□□□ 0.4
DDB1-214ENST00000539426 ZMYM3Q14202 1370 aa17.53■□□□□ 0.4
DDB1-214ENST00000539426 ADGBQ8N7X0 1667 aa17.52■□□□□ 0.4
DDB1-214ENST00000539426 DMRT2Q9Y5R5 561 aa17.52■□□□□ 0.4
DDB1-214ENST00000539426 NPATQ14207 1427 aa17.52■□□□□ 0.4
DDB1-214ENST00000539426 PTPRTO14522 1441 aa17.51■□□□□ 0.39
DDB1-214ENST00000539426 NCOA1Q15788 1441 aa17.51■□□□□ 0.39
DDB1-214ENST00000539426 CAMSAP1Q5T5Y3 1602 aa17.48■□□□□ 0.39
DDB1-214ENST00000539426 MYO3AQ8NEV4 1616 aa17.48■□□□□ 0.39
DDB1-214ENST00000539426 NCOA2Q15596 1464 aa17.48■□□□□ 0.39
DDB1-214ENST00000539426 PTPRKQ15262 1439 aa17.47■□□□□ 0.39
DDB1-214ENST00000539426 GGT6Q6P531 493 aa17.47■□□□□ 0.39
DDB1-214ENST00000539426 ZNF142P52746 1687 aaPredicted RBP17.47■□□□□ 0.39
DDB1-214ENST00000539426 LTBP4Q8N2S1 1624 aa17.46■□□□□ 0.39
DDB1-214ENST00000539426 RTEL1-TNFRSF6BF6WH68 1400 aa17.46■□□□□ 0.39
DDB1-214ENST00000539426 CAMSAP2Q08AD1 1489 aa17.45■□□□□ 0.38
DDB1-214ENST00000539426 CEP170BQ9Y4F5 1589 aaPredicted RBP17.44■□□□□ 0.38
DDB1-214ENST00000539426 CCDC141Q6ZP82 1450 aa17.44■□□□□ 0.38
DDB1-214ENST00000539426 DHX29Q7Z478 1369 aaKnown RBP17.42■□□□□ 0.38
DDB1-214ENST00000539426 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
DDB1-214ENST00000539426 NCKAP5LQ9HCH0 1330 aa17.4■□□□□ 0.38
DDB1-214ENST00000539426 VPS8Q8N3P4 1428 aa17.39■□□□□ 0.38
DDB1-214ENST00000539426 PLA2R1Q13018 1463 aa17.39■□□□□ 0.37
DDB1-214ENST00000539426 ARHGEF5Q12774 1597 aa17.39■□□□□ 0.37
DDB1-214ENST00000539426 LOC105371045A0A1W2PR82 267 aa17.38■□□□□ 0.37
DDB1-214ENST00000539426 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
DDB1-214ENST00000539426 LRRC9Q6ZRR7 1453 aa17.37■□□□□ 0.37
DDB1-214ENST00000539426 KIF3BO15066 747 aa17.36■□□□□ 0.37
DDB1-214ENST00000539426 A2ML1A8K2U0 1454 aa17.36■□□□□ 0.37
DDB1-214ENST00000539426 KDM5DQ9BY66 1539 aa17.36■□□□□ 0.37
DDB1-214ENST00000539426 DNMT1P26358 1616 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms