RNA–Protein interactions for RNA: ENST00000539399.1

TM7SF3-207, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-207ENST00000539399 SCAPERQ9BY12 1400 aa40.88■■■■■ 4.13
TM7SF3-207ENST00000539399 SIGLEC1Q9BZZ2 1709 aa40.87■■■■■ 4.13
TM7SF3-207ENST00000539399 POGZQ7Z3K3 1410 aa40.86■■■■■ 4.13
TM7SF3-207ENST00000539399 YEATS2Q9ULM3 1422 aa40.86■■■■■ 4.13
TM7SF3-207ENST00000539399 CLIP1P30622 1438 aa40.84■■■■■ 4.13
TM7SF3-207ENST00000539399 CASKIN1Q8WXD9 1431 aa40.84■■■■■ 4.13
TM7SF3-207ENST00000539399 MAGI2Q86UL8 1455 aa40.83■■■■■ 4.13
TM7SF3-207ENST00000539399 EFCAB2Q5VUJ9 269 aa40.8■■■■■ 4.12
TM7SF3-207ENST00000539399 RIMS1Q86UR5 1692 aaKnown RBP40.79■■■■■ 4.12
TM7SF3-207ENST00000539399 CCDC18Q5T9S5 1454 aa40.78■■■■■ 4.12
TM7SF3-207ENST00000539399 ARHGAP5Q13017 1502 aa40.77■■■■■ 4.12
TM7SF3-207ENST00000539399 CDC42BPBQ9Y5S2 1711 aa40.76■■■■■ 4.11
TM7SF3-207ENST00000539399 FYCO1Q9BQS8 1478 aa40.7■■■■■ 4.11
TM7SF3-207ENST00000539399 PREX2Q70Z35 1606 aa40.67■■■■■ 4.1
TM7SF3-207ENST00000539399 ZNF518AQ6AHZ1 1483 aa40.64■■■■■ 4.1
TM7SF3-207ENST00000539399 KDM5CP41229 1560 aa40.63■■■■■ 4.09
TM7SF3-207ENST00000539399 ATP10AO60312 1499 aa40.62■■■■■ 4.09
TM7SF3-207ENST00000539399 FER1L4A9Z1Z3 1794 aa40.61■■■■■ 4.09
TM7SF3-207ENST00000539399 CDC42BPAQ5VT25 1732 aa40.6■■■■■ 4.09
TM7SF3-207ENST00000539399 C9orf84Q5VXU9 1444 aa40.58■■■■■ 4.09
TM7SF3-207ENST00000539399 AFAP1Q8N556 730 aa40.56■■■■■ 4.08
TM7SF3-207ENST00000539399 MLECQ14165 292 aa40.55■■■■■ 4.08
TM7SF3-207ENST00000539399 ILDR1Q86SU0 546 aaPredicted RBP40.54■■■■■ 4.08
TM7SF3-207ENST00000539399 ITSN2Q9NZM3 1697 aa40.53■■■■■ 4.08
TM7SF3-207ENST00000539399 ABCC1P33527 1531 aa40.53■■■■■ 4.08
TM7SF3-207ENST00000539399 LMTK3Q96Q04 1460 aa40.53■■■■■ 4.08
TM7SF3-207ENST00000539399 ARHGEF12Q9NZN5 1544 aa40.5■■■■■ 4.07
TM7SF3-207ENST00000539399 DIP2CQ9Y2E4 1556 aa40.49■■■■■ 4.07
TM7SF3-207ENST00000539399 PLPPR3Q6T4P5 718 aa40.47■■■■■ 4.07
TM7SF3-207ENST00000539399 ABCA6Q8N139 1617 aa40.46■■■■■ 4.07
TM7SF3-207ENST00000539399 TRAPPC8Q9Y2L5 1435 aa40.45■■■■■ 4.07
TM7SF3-207ENST00000539399 MLH3Q9UHC1 1453 aa40.42■■■■■ 4.06
TM7SF3-207ENST00000539399 MYT1LQ9UL68 1186 aa40.41■■■■■ 4.06
TM7SF3-207ENST00000539399 REREQ9P2R6 1566 aa40.39■■■■■ 4.06
TM7SF3-207ENST00000539399 SAMD9LQ8IVG5 1584 aa40.37■■■■■ 4.05
TM7SF3-207ENST00000539399 GPATCH8Q9UKJ3 1502 aaKnown RBP40.36■■■■■ 4.05
TM7SF3-207ENST00000539399 KIDINS220Q9ULH0 1771 aa40.35■■■■■ 4.05
TM7SF3-207ENST00000539399 SYCP2Q9BX26 1530 aa40.3■■■■■ 4.04
TM7SF3-207ENST00000539399 CEP162Q5TB80 1403 aa40.29■■■■■ 4.04
TM7SF3-207ENST00000539399 ZNF777Q9ULD5 760 aaPredicted RBP40.29■■■■■ 4.04
TM7SF3-207ENST00000539399 HSPA2P54652 639 aa40.28■■■■■ 4.04
TM7SF3-207ENST00000539399 MTUS2Q5JR59 1369 aa40.25■■■■■ 4.03
TM7SF3-207ENST00000539399 AGLP35573 1532 aa40.24■■■■■ 4.03
TM7SF3-207ENST00000539399 PREX1Q8TCU6 1659 aa40.23■■■■■ 4.03
TM7SF3-207ENST00000539399 CEBPAP49715 358 aaPredicted RBP40.21■■■■■ 4.03
TM7SF3-207ENST00000539399 CCNB3Q8WWL7 1395 aa40.21■■■■■ 4.03
TM7SF3-207ENST00000539399 EHBP1L1Q8N3D4 1523 aa40.17■■■■■ 4.02
TM7SF3-207ENST00000539399 HNRNPMP52272 730 aaKnown RBP eCLIP40.17■■■■■ 4.02
TM7SF3-207ENST00000539399 CFDP1Q9UEE9 299 aaPredicted RBP40.17■■■■■ 4.02
TM7SF3-207ENST00000539399 TIAM1Q13009 1591 aa40.15■■■■■ 4.02
TM7SF3-207ENST00000539399 C3P01024 1663 aa40.15■■■■■ 4.02
TM7SF3-207ENST00000539399 PLEKHH2Q8IVE3 1493 aa40.13■■■■■ 4.02
TM7SF3-207ENST00000539399 KIAA1107Q9UPP5 1409 aa40.13■■■■■ 4.01
TM7SF3-207ENST00000539399 SPAG9O60271 1321 aaKnown RBP40.11■■■■■ 4.01
TM7SF3-207ENST00000539399 ATP7AQ04656 1500 aa40.11■■■■■ 4.01
TM7SF3-207ENST00000539399 INO80Q9ULG1 1556 aaPredicted RBP40.1■■■■■ 4.01
TM7SF3-207ENST00000539399 SETD1BQ9UPS6 1966 aaKnown RBP40.1■■■■■ 4.01
TM7SF3-207ENST00000539399 SUPT6HQ7KZ85 1726 aaKnown RBP40.08■■■■■ 4.01
TM7SF3-207ENST00000539399 ZNF644Q9H582 1327 aaPredicted RBP40■■■■□ 3.99
TM7SF3-207ENST00000539399 LOC105371045A0A1W2PR82 267 aa40■■■■□ 3.99
TM7SF3-207ENST00000539399 ESF1Q9H501 851 aaKnown RBP40■■■■□ 3.99
TM7SF3-207ENST00000539399 PLXNC1O60486 1568 aa39.99■■■■□ 3.99
TM7SF3-207ENST00000539399 FBXO41Q8TF61 875 aa39.98■■■■□ 3.99
TM7SF3-207ENST00000539399 UHRF1BP1Q6BDS2 1440 aa39.98■■■■□ 3.99
TM7SF3-207ENST00000539399 CNTLNQ9NXG0 1405 aa39.95■■■■□ 3.99
TM7SF3-207ENST00000539399 MROH2AA6NES4 1674 aa39.95■■■■□ 3.99
TM7SF3-207ENST00000539399 STRCQ7RTU9 1775 aa39.94■■■■□ 3.98
TM7SF3-207ENST00000539399 A2MP01023 1474 aa39.94■■■■□ 3.98
TM7SF3-207ENST00000539399 ADGBQ8N7X0 1667 aa39.93■■■■□ 3.98
TM7SF3-207ENST00000539399 MBD5Q9P267 1494 aa39.93■■■■□ 3.98
TM7SF3-207ENST00000539399 NCOA2Q15596 1464 aa39.91■■■■□ 3.98
TM7SF3-207ENST00000539399 CLTCQ00610 1675 aaKnown RBP39.86■■■■□ 3.97
TM7SF3-207ENST00000539399 VPS8Q8N3P4 1428 aa39.85■■■■□ 3.97
TM7SF3-207ENST00000539399 CAMSAP2Q08AD1 1489 aa39.81■■■■□ 3.96
TM7SF3-207ENST00000539399 RTEL1-TNFRSF6BF6WH68 1400 aa39.78■■■■□ 3.96
TM7SF3-207ENST00000539399 ZMYM3Q14202 1370 aa39.78■■■■□ 3.96
TM7SF3-207ENST00000539399 NPATQ14207 1427 aa39.76■■■■□ 3.96
TM7SF3-207ENST00000539399 CCDC141Q6ZP82 1450 aa39.75■■■■□ 3.95
TM7SF3-207ENST00000539399 LRRC9Q6ZRR7 1453 aa39.75■■■■□ 3.95
TM7SF3-207ENST00000539399 GGT6Q6P531 493 aa39.73■■■■□ 3.95
TM7SF3-207ENST00000539399 CERKQ8TCT0 537 aa39.69■■■■□ 3.94
TM7SF3-207ENST00000539399 DMRT2Q9Y5R5 561 aa39.69■■■■□ 3.94
TM7SF3-207ENST00000539399 DHX29Q7Z478 1369 aaKnown RBP39.66■■■■□ 3.94
TM7SF3-207ENST00000539399 ARHGEF5Q12774 1597 aa39.66■■■■□ 3.94
TM7SF3-207ENST00000539399 MYO3AQ8NEV4 1616 aa39.65■■■■□ 3.94
TM7SF3-207ENST00000539399 MAP3K1Q13233 1512 aa39.63■■■■□ 3.93
TM7SF3-207ENST00000539399 PTPRKQ15262 1439 aa39.63■■■■□ 3.93
TM7SF3-207ENST00000539399 ZNF142P52746 1687 aaPredicted RBP39.62■■■■□ 3.93
TM7SF3-207ENST00000539399 NCOA1Q15788 1441 aa39.62■■■■□ 3.93
TM7SF3-207ENST00000539399 PTPRTO14522 1441 aa39.61■■■■□ 3.93
TM7SF3-207ENST00000539399 KANK4Q5T7N3 995 aaPredicted RBP39.6■■■■□ 3.93
TM7SF3-207ENST00000539399 RSPH4AQ5TD94 716 aa39.6■■■■□ 3.93
TM7SF3-207ENST00000539399 PPP6R1Q9UPN7 881 aa39.6■■■■□ 3.93
TM7SF3-207ENST00000539399 CAMSAP1Q5T5Y3 1602 aa39.6■■■■□ 3.93
TM7SF3-207ENST00000539399 CEP170BQ9Y4F5 1589 aaPredicted RBP39.53■■■■□ 3.92
TM7SF3-207ENST00000539399 KIF3BO15066 747 aa39.52■■■■□ 3.92
TM7SF3-207ENST00000539399 KDM5DQ9BY66 1539 aa39.48■■■■□ 3.91
TM7SF3-207ENST00000539399 MYOM3Q5VTT5 1437 aa39.48■■■■□ 3.91
TM7SF3-207ENST00000539399 MAST1Q9Y2H9 1570 aa39.47■■■■□ 3.91
TM7SF3-207ENST00000539399 TSPY4P0CV99 314 aa39.47■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms