RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 MS4A4AQ96JQ5 239 aa7.72□□□□□ -1.17
CBX3P4-201ENST00000538909 PHF8Q9UPP1 1060 aa7.71□□□□□ -1.18
CBX3P4-201ENST00000538909 ZNF316A6NFI3 1004 aaPredicted RBP7.7□□□□□ -1.18
CBX3P4-201ENST00000538909 LSM11P83369 360 aaKnown RBP eCLIP7.69□□□□□ -1.18
CBX3P4-201ENST00000538909 SOX12O15370 315 aa7.68□□□□□ -1.18
CBX3P4-201ENST00000538909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.67□□□□□ -1.18
CBX3P4-201ENST00000538909 TRIM41Q8WV44 630 aa7.67□□□□□ -1.18
CBX3P4-201ENST00000538909 ZFP91Q96JP5 570 aaPredicted RBP7.67□□□□□ -1.18
CBX3P4-201ENST00000538909 RIOK3O14730 519 aaKnown RBP7.65□□□□□ -1.18
CBX3P4-201ENST00000538909 PLA2G2EQ9NZK7 142 aa7.64□□□□□ -1.19
CBX3P4-201ENST00000538909 AXIN2Q9Y2T1 843 aa7.64□□□□□ -1.19
CBX3P4-201ENST00000538909 NUDT7P0C024 238 aa7.63□□□□□ -1.19
CBX3P4-201ENST00000538909 RNF25Q96BH1 459 aaPredicted RBP7.63□□□□□ -1.19
CBX3P4-201ENST00000538909 VGFO15240 615 aaPredicted RBP7.61□□□□□ -1.19
CBX3P4-201ENST00000538909 PBX2P40425 430 aa7.59□□□□□ -1.19
CBX3P4-201ENST00000538909 NLRP6P59044 892 aa7.59□□□□□ -1.19
CBX3P4-201ENST00000538909 POTEEQ6S8J3 1075 aa7.59□□□□□ -1.19
CBX3P4-201ENST00000538909 LHX6Q9UPM6 363 aa7.59□□□□□ -1.19
CBX3P4-201ENST00000538909 C2orf72A6NCS6 295 aa7.57□□□□□ -1.2
CBX3P4-201ENST00000538909 HCSTQ9UBK5 93 aa7.57□□□□□ -1.2
CBX3P4-201ENST00000538909 FBXO22Q8NEZ5 403 aa7.56□□□□□ -1.2
CBX3P4-201ENST00000538909 BCL11BQ9C0K0 894 aaPredicted RBP7.55□□□□□ -1.2
CBX3P4-201ENST00000538909 PCDHGA4Q9Y5G9 962 aa7.55□□□□□ -1.2
CBX3P4-201ENST00000538909 STK24Q9Y6E0 443 aa7.54□□□□□ -1.2
CBX3P4-201ENST00000538909 KIF3CO14782 793 aa7.53□□□□□ -1.2
CBX3P4-201ENST00000538909 ADGRD1Q6QNK2 874 aa7.53□□□□□ -1.2
CBX3P4-201ENST00000538909 MFRPQ9BY79 579 aa7.51□□□□□ -1.21
CBX3P4-201ENST00000538909 ARHGAP33O14559 1287 aa7.5□□□□□ -1.21
CBX3P4-201ENST00000538909 TMC2Q8TDI7 906 aa7.49□□□□□ -1.21
CBX3P4-201ENST00000538909 DMRTA1Q5VZB9 504 aa7.48□□□□□ -1.21
CBX3P4-201ENST00000538909 KCTD12Q96CX2 325 aaKnown RBP7.48□□□□□ -1.21
CBX3P4-201ENST00000538909 SLC34A2O95436 690 aa7.47□□□□□ -1.21
CBX3P4-201ENST00000538909 PSEN2P49810 448 aa7.47□□□□□ -1.21
CBX3P4-201ENST00000538909 STK25O00506 426 aa7.46□□□□□ -1.22
CBX3P4-201ENST00000538909 TAOK2Q9UL54 1235 aa7.45□□□□□ -1.22
CBX3P4-201ENST00000538909 STAC3Q96MF2 364 aa7.44□□□□□ -1.22
CBX3P4-201ENST00000538909 PSDA5PKW4 1024 aaPredicted RBP7.43□□□□□ -1.22
CBX3P4-201ENST00000538909 HRO43593 1189 aa7.43□□□□□ -1.22
CBX3P4-201ENST00000538909 TK2O00142 265 aa7.42□□□□□ -1.22
CBX3P4-201ENST00000538909 PTPN5P54829 565 aa7.41□□□□□ -1.22
CBX3P4-201ENST00000538909 PPP4R3BQ5MIZ7 849 aa7.39□□□□□ -1.23
CBX3P4-201ENST00000538909 KCNK17Q96T54 332 aa7.39□□□□□ -1.23
CBX3P4-201ENST00000538909 KDM4FA0A1W2PPD8 638 aa7.38□□□□□ -1.23
CBX3P4-201ENST00000538909 PPP1R37O75864 691 aa7.38□□□□□ -1.23
CBX3P4-201ENST00000538909 PTCD2Q8WV60 388 aaKnown RBP7.36□□□□□ -1.23
CBX3P4-201ENST00000538909 ECM2O94769 699 aaPredicted RBP7.35□□□□□ -1.23
CBX3P4-201ENST00000538909 PLPP6Q8IY26 295 aa7.35□□□□□ -1.23
CBX3P4-201ENST00000538909 KCNH8Q96L42 1107 aa7.35□□□□□ -1.23
CBX3P4-201ENST00000538909 IRX2Q9BZI1 471 aaPredicted RBP7.35□□□□□ -1.23
CBX3P4-201ENST00000538909 VPS9D1Q9Y2B5 631 aa7.33□□□□□ -1.24
CBX3P4-201ENST00000538909 TBC1D12O60347 775 aa7.31□□□□□ -1.24
CBX3P4-201ENST00000538909 RGL2O15211 777 aa7.3□□□□□ -1.24
CBX3P4-201ENST00000538909 FOXK1P85037 733 aa7.3□□□□□ -1.24
CBX3P4-201ENST00000538909 A0A0G2JS52 829 aa7.29□□□□□ -1.24
CBX3P4-201ENST00000538909 GOLGA8CPA6NN73 597 aa7.29□□□□□ -1.24
CBX3P4-201ENST00000538909 DSG2Q14126 1118 aa7.29□□□□□ -1.24
CBX3P4-201ENST00000538909 RGS20O76081 388 aa7.28□□□□□ -1.24
CBX3P4-201ENST00000538909 THSD4Q6ZMP0 1018 aa7.28□□□□□ -1.24
CBX3P4-201ENST00000538909 ZNF454Q8N9F8 522 aa7.28□□□□□ -1.24
CBX3P4-201ENST00000538909 UPF1Q92900 1129 aaKnown RBP eCLIP7.28□□□□□ -1.24
CBX3P4-201ENST00000538909 GPHNQ9NQX3 736 aaPredicted RBP7.27□□□□□ -1.25
CBX3P4-201ENST00000538909 WNT2BQ93097 391 aa7.26□□□□□ -1.25
CBX3P4-201ENST00000538909 IFFO2Q5TF58 517 aa7.25□□□□□ -1.25
CBX3P4-201ENST00000538909 MRPL50Q8N5N7 158 aaKnown RBP7.24□□□□□ -1.25
CBX3P4-201ENST00000538909 BCL2L12Q9HB09 334 aa7.23□□□□□ -1.25
CBX3P4-201ENST00000538909 BHMG1C9JSJ3 638 aaPredicted RBP7.22□□□□□ -1.25
CBX3P4-201ENST00000538909 PTPREP23469 700 aa7.22□□□□□ -1.25
CBX3P4-201ENST00000538909 OXER1Q8TDS5 423 aa7.22□□□□□ -1.25
CBX3P4-201ENST00000538909 SLC4A5Q9BY07 1137 aa7.22□□□□□ -1.25
CBX3P4-201ENST00000538909 PKD2Q13563 968 aa7.21□□□□□ -1.26
CBX3P4-201ENST00000538909 ZBED2Q9BTP6 218 aa7.21□□□□□ -1.26
CBX3P4-201ENST00000538909 Q6ZNB5 142 aa7.2□□□□□ -1.26
CBX3P4-201ENST00000538909 FOSBP53539 338 aa7.19□□□□□ -1.26
CBX3P4-201ENST00000538909 NBPF3Q9H094 633 aa7.18□□□□□ -1.26
CBX3P4-201ENST00000538909 ADAM33Q9BZ11 813 aa7.16□□□□□ -1.26
CBX3P4-201ENST00000538909 PPP1R15BQ5SWA1 713 aa7.14□□□□□ -1.27
CBX3P4-201ENST00000538909 ANKK1Q8NFD2 765 aa7.14□□□□□ -1.27
CBX3P4-201ENST00000538909 ZDHHC16Q969W1 377 aa7.14□□□□□ -1.27
CBX3P4-201ENST00000538909 JPH4Q96JJ6 628 aa7.14□□□□□ -1.27
CBX3P4-201ENST00000538909 BCAMP50895 628 aa7.13□□□□□ -1.27
CBX3P4-201ENST00000538909 EVI5O60447 810 aa7.12□□□□□ -1.27
CBX3P4-201ENST00000538909 PROX2Q3B8N5 592 aa7.12□□□□□ -1.27
CBX3P4-201ENST00000538909 ITGBL1O95965 494 aaPredicted RBP7.11□□□□□ -1.27
CBX3P4-201ENST00000538909 HS6ST3Q8IZP7 471 aa7.11□□□□□ -1.27
CBX3P4-201ENST00000538909 CRISPLD2Q9H0B8 497 aa7.1□□□□□ -1.27
CBX3P4-201ENST00000538909 ANO8Q9HCE9 1232 aaPredicted RBP7.09□□□□□ -1.27
CBX3P4-201ENST00000538909 PPP1R3GB7ZBB8 358 aa7.08□□□□□ -1.28
CBX3P4-201ENST00000538909 CHGAP10645 457 aaKnown RBP7.08□□□□□ -1.28
CBX3P4-201ENST00000538909 COL9A1P20849 921 aa7.08□□□□□ -1.28
CBX3P4-201ENST00000538909 RABGEF1Q9UJ41 708 aa7.08□□□□□ -1.28
CBX3P4-201ENST00000538909 KCNC4Q03721 635 aa7.07□□□□□ -1.28
CBX3P4-201ENST00000538909 WBP1LQ9NX94 342 aa7.07□□□□□ -1.28
CBX3P4-201ENST00000538909 NCKAP5LQ9HCH0 1330 aa7.06□□□□□ -1.28
CBX3P4-201ENST00000538909 SOWAHBA6NEL2 793 aa7.06□□□□□ -1.28
CBX3P4-201ENST00000538909 MAP3K9P80192 1104 aa7.05□□□□□ -1.28
CBX3P4-201ENST00000538909 NKX1-1Q15270 411 aaPredicted RBP7.05□□□□□ -1.28
CBX3P4-201ENST00000538909 SEPT9Q9UHD8 586 aaPredicted RBP7.05□□□□□ -1.28
CBX3P4-201ENST00000538909 LCE2BO14633 110 aa7.04□□□□□ -1.28
CBX3P4-201ENST00000538909 GFRA3O60609 400 aa7.04□□□□□ -1.28
CBX3P4-201ENST00000538909 PDE4AP27815 886 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms