RNA–Protein interactions for RNA: ENST00000538647.1

SMCO2-204, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 5

Gene SMCO2, Length 287 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-204ENST00000538647 LARP6Q9BRS8 491 aaKnown RBP20.8■□□□□ 0.92
SMCO2-204ENST00000538647 MFSD10Q14728 455 aa20.72■□□□□ 0.91
SMCO2-204ENST00000538647 DDX27Q96GQ7 796 aaKnown RBP20.71■□□□□ 0.91
SMCO2-204ENST00000538647 GPHNQ9NQX3 736 aaPredicted RBP20.71■□□□□ 0.91
SMCO2-204ENST00000538647 TMC2Q8TDI7 906 aa20.69■□□□□ 0.9
SMCO2-204ENST00000538647 C3orf67Q6ZVT6 689 aa20.65■□□□□ 0.9
SMCO2-204ENST00000538647 P3H3Q8IVL6 736 aa20.65■□□□□ 0.9
SMCO2-204ENST00000538647 BCANQ96GW7 911 aa20.65■□□□□ 0.9
SMCO2-204ENST00000538647 KCNV2Q8TDN2 545 aa20.64■□□□□ 0.89
SMCO2-204ENST00000538647 C2orf72A6NCS6 295 aa20.63■□□□□ 0.89
SMCO2-204ENST00000538647 E2F4Q16254 413 aa20.62■□□□□ 0.89
SMCO2-204ENST00000538647 TMEM92Q6UXU6 159 aa20.62■□□□□ 0.89
SMCO2-204ENST00000538647 PPP1R15BQ5SWA1 713 aa20.61■□□□□ 0.89
SMCO2-204ENST00000538647 KIF3CO14782 793 aa20.6■□□□□ 0.89
SMCO2-204ENST00000538647 DSG2Q14126 1118 aa20.59■□□□□ 0.89
SMCO2-204ENST00000538647 POTEB2H3BUK9 544 aa20.56■□□□□ 0.88
SMCO2-204ENST00000538647 FOXK1P85037 733 aa20.56■□□□□ 0.88
SMCO2-204ENST00000538647 POTEJP0CG39 1038 aa20.54■□□□□ 0.88
SMCO2-204ENST00000538647 NBR1Q14596 966 aa20.52■□□□□ 0.88
SMCO2-204ENST00000538647 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.52■□□□□ 0.88
SMCO2-204ENST00000538647 CAMK2BQ13554 666 aa20.49■□□□□ 0.87
SMCO2-204ENST00000538647 PLPP6Q8IY26 295 aa20.49■□□□□ 0.87
SMCO2-204ENST00000538647 ARHGEF1Q92888 912 aaKnown RBP20.45■□□□□ 0.86
SMCO2-204ENST00000538647 EMILIN3Q9NT22 766 aa20.38■□□□□ 0.85
SMCO2-204ENST00000538647 SCUBE2Q9NQ36 999 aa20.36■□□□□ 0.85
SMCO2-204ENST00000538647 MAMSTRQ6ZN01 415 aa20.34■□□□□ 0.85
SMCO2-204ENST00000538647 ARIH1Q9Y4X5 557 aaPredicted RBP20.34■□□□□ 0.85
SMCO2-204ENST00000538647 DPYSL4O14531 572 aa20.29■□□□□ 0.84
SMCO2-204ENST00000538647 SLAIN1Q8ND83 568 aa20.29■□□□□ 0.84
SMCO2-204ENST00000538647 UPF1Q92900 1129 aaKnown RBP eCLIP20.26■□□□□ 0.83
SMCO2-204ENST00000538647 SEMA3EO15041 775 aa20.21■□□□□ 0.83
SMCO2-204ENST00000538647 OXER1Q8TDS5 423 aa20.21■□□□□ 0.83
SMCO2-204ENST00000538647 MAP3K9P80192 1104 aa20.19■□□□□ 0.82
SMCO2-204ENST00000538647 LHX8Q68G74 356 aa20.17■□□□□ 0.82
SMCO2-204ENST00000538647 SLC34A2O95436 690 aa20.16■□□□□ 0.82
SMCO2-204ENST00000538647 PDIA6Q15084 440 aa20.15■□□□□ 0.82
SMCO2-204ENST00000538647 PTCD2Q8WV60 388 aaKnown RBP20.14■□□□□ 0.81
SMCO2-204ENST00000538647 OTUD5Q96G74 571 aa20.14■□□□□ 0.81
SMCO2-204ENST00000538647 TESPA1A2RU30 521 aaPredicted RBP20.12■□□□□ 0.81
SMCO2-204ENST00000538647 SPDYE16A6NNV3 312 aaPredicted RBP20.12■□□□□ 0.81
SMCO2-204ENST00000538647 TBC1D12O60347 775 aa20.07■□□□□ 0.8
SMCO2-204ENST00000538647 HOXB3P14651 431 aaPredicted RBP20.06■□□□□ 0.8
SMCO2-204ENST00000538647 DOK7Q18PE1 504 aa20.05■□□□□ 0.8
SMCO2-204ENST00000538647 PCDHGA4Q9Y5G9 962 aa20.05■□□□□ 0.8
SMCO2-204ENST00000538647 EVI5O60447 810 aa20.03■□□□□ 0.8
SMCO2-204ENST00000538647 MLLT3P42568 568 aaPredicted RBP20.03■□□□□ 0.8
SMCO2-204ENST00000538647 TULP1O00294 542 aaPredicted RBP20.02■□□□□ 0.8
SMCO2-204ENST00000538647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.99■□□□□ 0.79
SMCO2-204ENST00000538647 SMYD5Q6GMV2 418 aa19.97■□□□□ 0.79
SMCO2-204ENST00000538647 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
SMCO2-204ENST00000538647 RIMBP2O15034 1052 aa19.96■□□□□ 0.79
SMCO2-204ENST00000538647 LMOD2Q6P5Q4 547 aa19.96■□□□□ 0.79
SMCO2-204ENST00000538647 TPRNQ4KMQ1 711 aa19.94■□□□□ 0.78
SMCO2-204ENST00000538647 ZNF710Q8N1W2 664 aa19.94■□□□□ 0.78
SMCO2-204ENST00000538647 SNPHO15079 494 aa19.93■□□□□ 0.78
SMCO2-204ENST00000538647 ARSIQ5FYB1 569 aa19.92■□□□□ 0.78
SMCO2-204ENST00000538647 ZSWIM6Q9HCJ5 1215 aa19.91■□□□□ 0.78
SMCO2-204ENST00000538647 GRXCR2A6NFK2 248 aa19.9■□□□□ 0.78
SMCO2-204ENST00000538647 PTGER2P43116 358 aa19.9■□□□□ 0.78
SMCO2-204ENST00000538647 DDX12PQ92771 950 aa19.9■□□□□ 0.78
SMCO2-204ENST00000538647 KHSRPQ92945 711 aaKnown RBP eCLIP19.9■□□□□ 0.78
SMCO2-204ENST00000538647 ANO8Q9HCE9 1232 aaPredicted RBP19.9■□□□□ 0.78
SMCO2-204ENST00000538647 PRKCSHP14314 528 aaPredicted RBP19.89■□□□□ 0.77
SMCO2-204ENST00000538647 GPR153Q6NV75 609 aa19.87■□□□□ 0.77
SMCO2-204ENST00000538647 KDM4FA0A1W2PPD8 638 aa19.86■□□□□ 0.77
SMCO2-204ENST00000538647 NUDT7P0C024 238 aa19.85■□□□□ 0.77
SMCO2-204ENST00000538647 RBM26Q5T8P6 1007 aaKnown RBP19.82■□□□□ 0.76
SMCO2-204ENST00000538647 OSBPP22059 807 aa19.78■□□□□ 0.76
SMCO2-204ENST00000538647 HOXB1P14653 301 aaPredicted RBP19.74■□□□□ 0.75
SMCO2-204ENST00000538647 PHF14O94880 888 aa19.73■□□□□ 0.75
SMCO2-204ENST00000538647 PRIM1P49642 420 aaKnown RBP19.71■□□□□ 0.75
SMCO2-204ENST00000538647 JPH4Q96JJ6 628 aa19.71■□□□□ 0.75
SMCO2-204ENST00000538647 PCDHGA10Q9Y5H3 936 aa19.71■□□□□ 0.75
SMCO2-204ENST00000538647 GPIHBP1Q8IV16 184 aa19.69■□□□□ 0.74
SMCO2-204ENST00000538647 ZC3H15Q8WU90 426 aaKnown RBP19.69■□□□□ 0.74
SMCO2-204ENST00000538647 EPAS1Q99814 870 aa19.69■□□□□ 0.74
SMCO2-204ENST00000538647 LHX6Q9UPM6 363 aa19.69■□□□□ 0.74
SMCO2-204ENST00000538647 FOSBP53539 338 aa19.67■□□□□ 0.74
SMCO2-204ENST00000538647 ZNF454Q8N9F8 522 aa19.67■□□□□ 0.74
SMCO2-204ENST00000538647 TYW1BQ6NUM6 668 aa19.65■□□□□ 0.74
SMCO2-204ENST00000538647 NUTM2FA1L443 756 aa19.63■□□□□ 0.73
SMCO2-204ENST00000538647 RBM33Q96EV2 1170 aaKnown RBP19.63■□□□□ 0.73
SMCO2-204ENST00000538647 EN1Q05925 392 aaPredicted RBP19.62■□□□□ 0.73
SMCO2-204ENST00000538647 ST18O60284 1047 aa19.61■□□□□ 0.73
SMCO2-204ENST00000538647 FBXW7Q969H0 707 aa19.6■□□□□ 0.73
SMCO2-204ENST00000538647 MAP3K7O43318 606 aa19.59■□□□□ 0.73
SMCO2-204ENST00000538647 ZDHHC16Q969W1 377 aa19.58■□□□□ 0.72
SMCO2-204ENST00000538647 FAM163AQ96GL9 167 aaPredicted RBP19.56■□□□□ 0.72
SMCO2-204ENST00000538647 PSDA5PKW4 1024 aaPredicted RBP19.54■□□□□ 0.72
SMCO2-204ENST00000538647 GPR37O15354 613 aa19.54■□□□□ 0.72
SMCO2-204ENST00000538647 PPP4R3BQ5MIZ7 849 aa19.54■□□□□ 0.72
SMCO2-204ENST00000538647 TSR1Q2NL82 804 aaKnown RBP19.53■□□□□ 0.72
SMCO2-204ENST00000538647 ADAM33Q9BZ11 813 aa19.53■□□□□ 0.72
SMCO2-204ENST00000538647 CDHR5Q9HBB8 845 aa19.53■□□□□ 0.72
SMCO2-204ENST00000538647 ZMYND10O75800 440 aa19.52■□□□□ 0.72
SMCO2-204ENST00000538647 MARVELD3Q96A59 401 aa19.5■□□□□ 0.71
SMCO2-204ENST00000538647 FCHSD2O94868 740 aa19.48■□□□□ 0.71
SMCO2-204ENST00000538647 EMP3P54852 163 aa19.47■□□□□ 0.71
SMCO2-204ENST00000538647 PTGDRQ13258 359 aa19.47■□□□□ 0.71
SMCO2-204ENST00000538647 ERBB3P21860 1342 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms