RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 PTPRMP28827 1452 aa14.22□□□□□ -0.13
DDB1-212ENST00000538470 PREX2Q70Z35 1606 aa14.19□□□□□ -0.14
DDB1-212ENST00000538470 CASKIN1Q8WXD9 1431 aa14.19□□□□□ -0.14
DDB1-212ENST00000538470 EHMT2Q96KQ7 1210 aa14.19□□□□□ -0.14
DDB1-212ENST00000538470 RIMS1Q86UR5 1692 aaKnown RBP14.19□□□□□ -0.14
DDB1-212ENST00000538470 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
DDB1-212ENST00000538470 SIGLEC1Q9BZZ2 1709 aa14.18□□□□□ -0.14
DDB1-212ENST00000538470 KDM5CP41229 1560 aa14.17□□□□□ -0.14
DDB1-212ENST00000538470 SCAPERQ9BY12 1400 aa14.17□□□□□ -0.14
DDB1-212ENST00000538470 ARHGAP5Q13017 1502 aa14.17□□□□□ -0.14
DDB1-212ENST00000538470 CDC42BPBQ9Y5S2 1711 aa14.17□□□□□ -0.14
DDB1-212ENST00000538470 FER1L4A9Z1Z3 1794 aa14.17□□□□□ -0.14
DDB1-212ENST00000538470 YEATS2Q9ULM3 1422 aa14.16□□□□□ -0.14
DDB1-212ENST00000538470 ATP1B4Q9UN42 357 aaPredicted RBP14.16□□□□□ -0.14
DDB1-212ENST00000538470 ZNF518AQ6AHZ1 1483 aa14.16□□□□□ -0.14
DDB1-212ENST00000538470 ARID4BQ4LE39 1312 aaPredicted RBP14.15□□□□□ -0.15
DDB1-212ENST00000538470 EFCAB2Q5VUJ9 269 aa14.14□□□□□ -0.15
DDB1-212ENST00000538470 ITSN2Q9NZM3 1697 aa14.14□□□□□ -0.15
DDB1-212ENST00000538470 CDC42BPAQ5VT25 1732 aa14.13□□□□□ -0.15
DDB1-212ENST00000538470 C9orf84Q5VXU9 1444 aa14.13□□□□□ -0.15
DDB1-212ENST00000538470 REREQ9P2R6 1566 aa14.13□□□□□ -0.15
DDB1-212ENST00000538470 ABCC1P33527 1531 aa14.12□□□□□ -0.15
DDB1-212ENST00000538470 ATP10AO60312 1499 aa14.11□□□□□ -0.15
DDB1-212ENST00000538470 ARHGEF12Q9NZN5 1544 aa14.1□□□□□ -0.15
DDB1-212ENST00000538470 DIP2CQ9Y2E4 1556 aa14.09□□□□□ -0.15
DDB1-212ENST00000538470 LMTK3Q96Q04 1460 aa14.09□□□□□ -0.15
DDB1-212ENST00000538470 ABCA6Q8N139 1617 aa14.08□□□□□ -0.16
DDB1-212ENST00000538470 MLH3Q9UHC1 1453 aa14.07□□□□□ -0.16
DDB1-212ENST00000538470 PREX1Q8TCU6 1659 aa14.04□□□□□ -0.16
DDB1-212ENST00000538470 AGLP35573 1532 aa14.04□□□□□ -0.16
DDB1-212ENST00000538470 SAMD9LQ8IVG5 1584 aa14.04□□□□□ -0.16
DDB1-212ENST00000538470 KIDINS220Q9ULH0 1771 aa14.04□□□□□ -0.16
DDB1-212ENST00000538470 EHBP1L1Q8N3D4 1523 aa14.02□□□□□ -0.16
DDB1-212ENST00000538470 TRAPPC8Q9Y2L5 1435 aa14.01□□□□□ -0.17
DDB1-212ENST00000538470 SYCP2Q9BX26 1530 aa14□□□□□ -0.17
DDB1-212ENST00000538470 GPATCH8Q9UKJ3 1502 aaKnown RBP14□□□□□ -0.17
DDB1-212ENST00000538470 PLEKHH2Q8IVE3 1493 aa14□□□□□ -0.17
DDB1-212ENST00000538470 ILDR1Q86SU0 546 aaPredicted RBP13.99□□□□□ -0.17
DDB1-212ENST00000538470 AFAP1Q8N556 730 aa13.99□□□□□ -0.17
DDB1-212ENST00000538470 INO80Q9ULG1 1556 aaPredicted RBP13.99□□□□□ -0.17
DDB1-212ENST00000538470 MLECQ14165 292 aa13.98□□□□□ -0.17
DDB1-212ENST00000538470 SETD1BQ9UPS6 1966 aaKnown RBP13.98□□□□□ -0.17
DDB1-212ENST00000538470 CEP162Q5TB80 1403 aa13.98□□□□□ -0.17
DDB1-212ENST00000538470 TIAM1Q13009 1591 aa13.97□□□□□ -0.17
DDB1-212ENST00000538470 MROH2AA6NES4 1674 aa13.97□□□□□ -0.17
DDB1-212ENST00000538470 C3P01024 1663 aa13.97□□□□□ -0.17
DDB1-212ENST00000538470 KIAA1107Q9UPP5 1409 aa13.97□□□□□ -0.17
DDB1-212ENST00000538470 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.17
DDB1-212ENST00000538470 ATP7AQ04656 1500 aa13.96□□□□□ -0.17
DDB1-212ENST00000538470 MYT1LQ9UL68 1186 aa13.96□□□□□ -0.17
DDB1-212ENST00000538470 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
DDB1-212ENST00000538470 CCNB3Q8WWL7 1395 aa13.95□□□□□ -0.18
DDB1-212ENST00000538470 CNTLNQ9NXG0 1405 aa13.94□□□□□ -0.18
DDB1-212ENST00000538470 ADGBQ8N7X0 1667 aa13.94□□□□□ -0.18
DDB1-212ENST00000538470 SUPT6HQ7KZ85 1726 aaKnown RBP13.93□□□□□ -0.18
DDB1-212ENST00000538470 UHRF1BP1Q6BDS2 1440 aa13.92□□□□□ -0.18
DDB1-212ENST00000538470 PLPPR3Q6T4P5 718 aa13.9□□□□□ -0.18
DDB1-212ENST00000538470 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
DDB1-212ENST00000538470 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.19
DDB1-212ENST00000538470 ZNF777Q9ULD5 760 aaPredicted RBP13.89□□□□□ -0.19
DDB1-212ENST00000538470 HSPA2P54652 639 aa13.88□□□□□ -0.19
DDB1-212ENST00000538470 STRCQ7RTU9 1775 aa13.88□□□□□ -0.19
DDB1-212ENST00000538470 A2MP01023 1474 aa13.87□□□□□ -0.19
DDB1-212ENST00000538470 FBXO41Q8TF61 875 aa13.87□□□□□ -0.19
DDB1-212ENST00000538470 ESF1Q9H501 851 aaKnown RBP13.87□□□□□ -0.19
DDB1-212ENST00000538470 CLTCQ00610 1675 aaKnown RBP13.86□□□□□ -0.19
DDB1-212ENST00000538470 NPATQ14207 1427 aa13.86□□□□□ -0.19
DDB1-212ENST00000538470 VPS8Q8N3P4 1428 aa13.86□□□□□ -0.19
DDB1-212ENST00000538470 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
DDB1-212ENST00000538470 MBD5Q9P267 1494 aa13.86□□□□□ -0.19
DDB1-212ENST00000538470 ZNF142P52746 1687 aaPredicted RBP13.85□□□□□ -0.19
DDB1-212ENST00000538470 RTEL1-TNFRSF6BF6WH68 1400 aa13.85□□□□□ -0.19
DDB1-212ENST00000538470 HNRNPMP52272 730 aaKnown RBP eCLIP13.85□□□□□ -0.19
DDB1-212ENST00000538470 CEBPAP49715 358 aaPredicted RBP13.84□□□□□ -0.19
DDB1-212ENST00000538470 CAMSAP2Q08AD1 1489 aa13.84□□□□□ -0.19
DDB1-212ENST00000538470 CCDC141Q6ZP82 1450 aa13.84□□□□□ -0.19
DDB1-212ENST00000538470 FAM135AQ9P2D6 1515 aa13.84□□□□□ -0.19
DDB1-212ENST00000538470 ARHGEF5Q12774 1597 aa13.83□□□□□ -0.19
DDB1-212ENST00000538470 MAP3K1Q13233 1512 aa13.83□□□□□ -0.2
DDB1-212ENST00000538470 MYO3AQ8NEV4 1616 aa13.82□□□□□ -0.2
DDB1-212ENST00000538470 LRRC9Q6ZRR7 1453 aa13.8□□□□□ -0.2
DDB1-212ENST00000538470 DMRT2Q9Y5R5 561 aa13.79□□□□□ -0.2
DDB1-212ENST00000538470 PTPRTO14522 1441 aa13.79□□□□□ -0.2
DDB1-212ENST00000538470 PPP6R1Q9UPN7 881 aa13.78□□□□□ -0.2
DDB1-212ENST00000538470 ZNF644Q9H582 1327 aaPredicted RBP13.78□□□□□ -0.2
DDB1-212ENST00000538470 ZMYM3Q14202 1370 aa13.78□□□□□ -0.2
DDB1-212ENST00000538470 NCOA1Q15788 1441 aa13.78□□□□□ -0.2
DDB1-212ENST00000538470 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
DDB1-212ENST00000538470 RSPH4AQ5TD94 716 aa13.77□□□□□ -0.21
DDB1-212ENST00000538470 KDM5DQ9BY66 1539 aa13.77□□□□□ -0.21
DDB1-212ENST00000538470 CEP170BQ9Y4F5 1589 aaPredicted RBP13.77□□□□□ -0.21
DDB1-212ENST00000538470 CAMSAP1Q5T5Y3 1602 aa13.76□□□□□ -0.21
DDB1-212ENST00000538470 PTPRKQ15262 1439 aa13.76□□□□□ -0.21
DDB1-212ENST00000538470 DHX29Q7Z478 1369 aaKnown RBP13.76□□□□□ -0.21
DDB1-212ENST00000538470 EIF2AK4Q9P2K8 1649 aaKnown RBP13.75□□□□□ -0.21
DDB1-212ENST00000538470 PLA2R1Q13018 1463 aa13.74□□□□□ -0.21
DDB1-212ENST00000538470 CERKQ8TCT0 537 aa13.74□□□□□ -0.21
DDB1-212ENST00000538470 ZC3H13Q5T200 1668 aaKnown RBP13.74□□□□□ -0.21
DDB1-212ENST00000538470 RNF17Q9BXT8 1623 aaKnown RBP13.74□□□□□ -0.21
DDB1-212ENST00000538470 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms