RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 YEATS2Q9ULM3 1422 aa27.45■■□□□ 1.98
PTPN6-210ENST00000538318 TROQ12816 1431 aaPredicted RBP27.44■■□□□ 1.98
PTPN6-210ENST00000538318 KIF14Q15058 1648 aa27.44■■□□□ 1.98
PTPN6-210ENST00000538318 LRRIQ1Q96JM4 1722 aa27.44■■□□□ 1.98
PTPN6-210ENST00000538318 EFCAB2Q5VUJ9 269 aa27.43■■□□□ 1.98
PTPN6-210ENST00000538318 SIGLEC1Q9BZZ2 1709 aa27.41■■□□□ 1.98
PTPN6-210ENST00000538318 CLIP1P30622 1438 aa27.39■■□□□ 1.97
PTPN6-210ENST00000538318 RIMS1Q86UR5 1692 aaKnown RBP27.39■■□□□ 1.97
PTPN6-210ENST00000538318 CASKIN1Q8WXD9 1431 aa27.36■■□□□ 1.97
PTPN6-210ENST00000538318 ARHGAP5Q13017 1502 aa27.33■■□□□ 1.97
PTPN6-210ENST00000538318 PCF11O94913 1555 aaKnown RBP27.33■■□□□ 1.97
PTPN6-210ENST00000538318 ATP10AO60312 1499 aa27.32■■□□□ 1.96
PTPN6-210ENST00000538318 CCDC18Q5T9S5 1454 aa27.32■■□□□ 1.96
PTPN6-210ENST00000538318 ZNF518AQ6AHZ1 1483 aa27.31■■□□□ 1.96
PTPN6-210ENST00000538318 LMTK3Q96Q04 1460 aa27.31■■□□□ 1.96
PTPN6-210ENST00000538318 CDC42BPBQ9Y5S2 1711 aa27.29■■□□□ 1.96
PTPN6-210ENST00000538318 C9orf84Q5VXU9 1444 aa27.28■■□□□ 1.96
PTPN6-210ENST00000538318 KDM5CP41229 1560 aa27.27■■□□□ 1.96
PTPN6-210ENST00000538318 MLECQ14165 292 aa27.26■■□□□ 1.95
PTPN6-210ENST00000538318 AFAP1Q8N556 730 aa27.26■■□□□ 1.95
PTPN6-210ENST00000538318 FER1L4A9Z1Z3 1794 aa27.25■■□□□ 1.95
PTPN6-210ENST00000538318 FYCO1Q9BQS8 1478 aa27.24■■□□□ 1.95
PTPN6-210ENST00000538318 PREX2Q70Z35 1606 aa27.23■■□□□ 1.95
PTPN6-210ENST00000538318 ARHGEF12Q9NZN5 1544 aa27.22■■□□□ 1.95
PTPN6-210ENST00000538318 PLPPR3Q6T4P5 718 aa27.2■■□□□ 1.94
PTPN6-210ENST00000538318 ABCC1P33527 1531 aa27.17■■□□□ 1.94
PTPN6-210ENST00000538318 MLH3Q9UHC1 1453 aa27.17■■□□□ 1.94
PTPN6-210ENST00000538318 CDC42BPAQ5VT25 1732 aa27.16■■□□□ 1.94
PTPN6-210ENST00000538318 DIP2CQ9Y2E4 1556 aa27.16■■□□□ 1.94
PTPN6-210ENST00000538318 REREQ9P2R6 1566 aa27.14■■□□□ 1.94
PTPN6-210ENST00000538318 MYT1LQ9UL68 1186 aa27.14■■□□□ 1.94
PTPN6-210ENST00000538318 TRAPPC8Q9Y2L5 1435 aa27.14■■□□□ 1.93
PTPN6-210ENST00000538318 ITSN2Q9NZM3 1697 aa27.14■■□□□ 1.93
PTPN6-210ENST00000538318 HSPA2P54652 639 aa27.13■■□□□ 1.93
PTPN6-210ENST00000538318 ABCA6Q8N139 1617 aa27.12■■□□□ 1.93
PTPN6-210ENST00000538318 FBXO41Q8TF61 875 aa27.08■■□□□ 1.93
PTPN6-210ENST00000538318 GPATCH8Q9UKJ3 1502 aaKnown RBP27.06■■□□□ 1.92
PTPN6-210ENST00000538318 CEBPAP49715 358 aaPredicted RBP27.06■■□□□ 1.92
PTPN6-210ENST00000538318 AGLP35573 1532 aa27.06■■□□□ 1.92
PTPN6-210ENST00000538318 KIDINS220Q9ULH0 1771 aa27.05■■□□□ 1.92
PTPN6-210ENST00000538318 PREX1Q8TCU6 1659 aa27.04■■□□□ 1.92
PTPN6-210ENST00000538318 SAMD9LQ8IVG5 1584 aa27.03■■□□□ 1.92
PTPN6-210ENST00000538318 ZNF777Q9ULD5 760 aaPredicted RBP27.02■■□□□ 1.92
PTPN6-210ENST00000538318 SETD1BQ9UPS6 1966 aaKnown RBP26.99■■□□□ 1.91
PTPN6-210ENST00000538318 SYCP2Q9BX26 1530 aa26.99■■□□□ 1.91
PTPN6-210ENST00000538318 KIAA1107Q9UPP5 1409 aa26.97■■□□□ 1.91
PTPN6-210ENST00000538318 CCNB3Q8WWL7 1395 aa26.97■■□□□ 1.91
PTPN6-210ENST00000538318 CFDP1Q9UEE9 299 aaPredicted RBP26.96■■□□□ 1.91
PTPN6-210ENST00000538318 MTUS2Q5JR59 1369 aa26.96■■□□□ 1.91
PTPN6-210ENST00000538318 HNRNPMP52272 730 aaKnown RBP eCLIP26.95■■□□□ 1.9
PTPN6-210ENST00000538318 C3P01024 1663 aa26.94■■□□□ 1.9
PTPN6-210ENST00000538318 PLEKHH2Q8IVE3 1493 aa26.93■■□□□ 1.9
PTPN6-210ENST00000538318 SPAG9O60271 1321 aaKnown RBP26.93■■□□□ 1.9
PTPN6-210ENST00000538318 UHRF1BP1Q6BDS2 1440 aa26.92■■□□□ 1.9
PTPN6-210ENST00000538318 ESF1Q9H501 851 aaKnown RBP26.92■■□□□ 1.9
PTPN6-210ENST00000538318 CEP162Q5TB80 1403 aa26.9■■□□□ 1.9
PTPN6-210ENST00000538318 ATP7AQ04656 1500 aa26.89■■□□□ 1.89
PTPN6-210ENST00000538318 CNTLNQ9NXG0 1405 aa26.89■■□□□ 1.89
PTPN6-210ENST00000538318 EHBP1L1Q8N3D4 1523 aa26.87■■□□□ 1.89
PTPN6-210ENST00000538318 INO80Q9ULG1 1556 aaPredicted RBP26.87■■□□□ 1.89
PTPN6-210ENST00000538318 STRCQ7RTU9 1775 aa26.86■■□□□ 1.89
PTPN6-210ENST00000538318 TIAM1Q13009 1591 aa26.85■■□□□ 1.89
PTPN6-210ENST00000538318 SUPT6HQ7KZ85 1726 aaKnown RBP26.84■■□□□ 1.89
PTPN6-210ENST00000538318 DMRT2Q9Y5R5 561 aa26.83■■□□□ 1.89
PTPN6-210ENST00000538318 PLXNC1O60486 1568 aa26.83■■□□□ 1.89
PTPN6-210ENST00000538318 CERKQ8TCT0 537 aa26.82■■□□□ 1.88
PTPN6-210ENST00000538318 MROH2AA6NES4 1674 aa26.81■■□□□ 1.88
PTPN6-210ENST00000538318 ZNF644Q9H582 1327 aaPredicted RBP26.81■■□□□ 1.88
PTPN6-210ENST00000538318 A2MP01023 1474 aa26.81■■□□□ 1.88
PTPN6-210ENST00000538318 MBD5Q9P267 1494 aa26.8■■□□□ 1.88
PTPN6-210ENST00000538318 ZMYM3Q14202 1370 aa26.77■■□□□ 1.88
PTPN6-210ENST00000538318 NPATQ14207 1427 aa26.76■■□□□ 1.87
PTPN6-210ENST00000538318 ADGBQ8N7X0 1667 aa26.75■■□□□ 1.87
PTPN6-210ENST00000538318 RTEL1-TNFRSF6BF6WH68 1400 aa26.73■■□□□ 1.87
PTPN6-210ENST00000538318 CLTCQ00610 1675 aaKnown RBP26.72■■□□□ 1.87
PTPN6-210ENST00000538318 PTPRTO14522 1441 aa26.72■■□□□ 1.87
PTPN6-210ENST00000538318 NCOA2Q15596 1464 aa26.71■■□□□ 1.87
PTPN6-210ENST00000538318 GGT6Q6P531 493 aa26.7■■□□□ 1.86
PTPN6-210ENST00000538318 PPP6R1Q9UPN7 881 aa26.7■■□□□ 1.86
PTPN6-210ENST00000538318 NCOA1Q15788 1441 aa26.67■■□□□ 1.86
PTPN6-210ENST00000538318 DHX29Q7Z478 1369 aaKnown RBP26.66■■□□□ 1.86
PTPN6-210ENST00000538318 RSPH4AQ5TD94 716 aa26.65■■□□□ 1.86
PTPN6-210ENST00000538318 CAMSAP2Q08AD1 1489 aa26.65■■□□□ 1.86
PTPN6-210ENST00000538318 CCDC141Q6ZP82 1450 aa26.64■■□□□ 1.86
PTPN6-210ENST00000538318 LOC105371045A0A1W2PR82 267 aa26.64■■□□□ 1.86
PTPN6-210ENST00000538318 PTPRKQ15262 1439 aa26.64■■□□□ 1.85
PTPN6-210ENST00000538318 VPS8Q8N3P4 1428 aa26.64■■□□□ 1.85
PTPN6-210ENST00000538318 CAMSAP1Q5T5Y3 1602 aa26.62■■□□□ 1.85
PTPN6-210ENST00000538318 MYO3AQ8NEV4 1616 aa26.6■■□□□ 1.85
PTPN6-210ENST00000538318 LRRC9Q6ZRR7 1453 aa26.59■■□□□ 1.85
PTPN6-210ENST00000538318 ZNF142P52746 1687 aaPredicted RBP26.59■■□□□ 1.85
PTPN6-210ENST00000538318 ARHGEF5Q12774 1597 aa26.57■■□□□ 1.84
PTPN6-210ENST00000538318 CEP170BQ9Y4F5 1589 aaPredicted RBP26.55■■□□□ 1.84
PTPN6-210ENST00000538318 LTBP4Q8N2S1 1624 aa26.55■■□□□ 1.84
PTPN6-210ENST00000538318 KIF3BO15066 747 aa26.54■■□□□ 1.84
PTPN6-210ENST00000538318 PLA2R1Q13018 1463 aa26.54■■□□□ 1.84
PTPN6-210ENST00000538318 MAP3K1Q13233 1512 aa26.53■■□□□ 1.84
PTPN6-210ENST00000538318 NCKAP5LQ9HCH0 1330 aa26.52■■□□□ 1.84
PTPN6-210ENST00000538318 FAM135AQ9P2D6 1515 aa26.51■■□□□ 1.83
PTPN6-210ENST00000538318 TSPY4P0CV99 314 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms