RNA–Protein interactions for RNA: ENST00000538288.1

CD6-208, Transcript of CD6 molecule, human

TSL 4

Gene CD6, Length 423 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD6-208	ENST00000538288	PREX2	Q70Z35	1606 aa		33.34	■■■□□ 2.93
CD6-208	ENST00000538288	POGZ	Q7Z3K3	1410 aa		33.34	■■■□□ 2.93
CD6-208	ENST00000538288	SCAPER	Q9BY12	1400 aa		33.34	■■■□□ 2.93
CD6-208	ENST00000538288	MAGI2	Q86UL8	1455 aa		33.33	■■■□□ 2.93
CD6-208	ENST00000538288	CDC42BPB	Q9Y5S2	1711 aa		33.28	■■■□□ 2.92
CD6-208	ENST00000538288	ZFYVE16	Q7Z3T8	1539 aa		33.27	■■■□□ 2.92
CD6-208	ENST00000538288	MTUS2	Q5JR59	1369 aa		33.26	■■■□□ 2.92
CD6-208	ENST00000538288	ZNF518A	Q6AHZ1	1483 aa		33.25	■■■□□ 2.91
CD6-208	ENST00000538288	LOC105371045	A0A1W2PR82	267 aa		33.24	■■■□□ 2.91
CD6-208	ENST00000538288	CDC42BPA	Q5VT25	1732 aa		33.23	■■■□□ 2.91
CD6-208	ENST00000538288	EHBP1L1	Q8N3D4	1523 aa		33.23	■■■□□ 2.91
CD6-208	ENST00000538288	VPS8	Q8N3P4	1428 aa		33.18	■■■□□ 2.9
CD6-208	ENST00000538288	ABCC1	P33527	1531 aa		33.18	■■■□□ 2.9
CD6-208	ENST00000538288	KDM5C	P41229	1560 aa		33.17	■■■□□ 2.9
CD6-208	ENST00000538288	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.15	■■■□□ 2.9
CD6-208	ENST00000538288	BCORL1	Q5H9F3	1711 aa		33.14	■■■□□ 2.9
CD6-208	ENST00000538288	YEATS2	Q9ULM3	1422 aa		33.13	■■■□□ 2.89
CD6-208	ENST00000538288	ADAMTSL3	P82987	1691 aa		33.13	■■■□□ 2.89
CD6-208	ENST00000538288	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.12	■■■□□ 2.89
CD6-208	ENST00000538288	CCNB3	Q8WWL7	1395 aa		33.12	■■■□□ 2.89
CD6-208	ENST00000538288	ITSN2	Q9NZM3	1697 aa		33.12	■■■□□ 2.89
CD6-208	ENST00000538288	HECW2	Q9P2P5	1572 aa		33.1	■■■□□ 2.89
CD6-208	ENST00000538288	PLEKHH2	Q8IVE3	1493 aa		33.08	■■■□□ 2.89
CD6-208	ENST00000538288	ATP10A	O60312	1499 aa		33.07	■■■□□ 2.88
CD6-208	ENST00000538288	C9orf84	Q5VXU9	1444 aa		33.07	■■■□□ 2.88
CD6-208	ENST00000538288	TIAM1	Q13009	1591 aa		33.07	■■■□□ 2.88
CD6-208	ENST00000538288	MLH3	Q9UHC1	1453 aa		33.05	■■■□□ 2.88
CD6-208	ENST00000538288	SAMD9L	Q8IVG5	1584 aa		33.04	■■■□□ 2.88
CD6-208	ENST00000538288	AFAP1	Q8N556	730 aa		33.04	■■■□□ 2.88
CD6-208	ENST00000538288	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.04	■■■□□ 2.88
CD6-208	ENST00000538288	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.03	■■■□□ 2.88
CD6-208	ENST00000538288	ARHGEF12	Q9NZN5	1544 aa		33.02	■■■□□ 2.88
CD6-208	ENST00000538288	MYT1L	Q9UL68	1186 aa		33.01	■■■□□ 2.87
CD6-208	ENST00000538288	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.01	■■■□□ 2.87
CD6-208	ENST00000538288	KIAA1107	Q9UPP5	1409 aa		33.01	■■■□□ 2.87
CD6-208	ENST00000538288	MADD	Q8WXG6	1647 aa		33	■■■□□ 2.87
CD6-208	ENST00000538288	TRAPPC8	Q9Y2L5	1435 aa		33	■■■□□ 2.87
CD6-208	ENST00000538288	MAP3K1	Q13233	1512 aa		32.99	■■■□□ 2.87
CD6-208	ENST00000538288	SYCP2	Q9BX26	1530 aa		32.99	■■■□□ 2.87
CD6-208	ENST00000538288	RERE	Q9P2R6	1566 aa		32.98	■■■□□ 2.87
CD6-208	ENST00000538288	PTPRM	P28827	1452 aa		32.98	■■■□□ 2.87
CD6-208	ENST00000538288	DIP2C	Q9Y2E4	1556 aa		32.96	■■■□□ 2.87
CD6-208	ENST00000538288	NCOA2	Q15596	1464 aa		32.94	■■■□□ 2.86
CD6-208	ENST00000538288	SIGLEC1	Q9BZZ2	1709 aa		32.94	■■■□□ 2.86
CD6-208	ENST00000538288	ABCA6	Q8N139	1617 aa		32.92	■■■□□ 2.86
CD6-208	ENST00000538288	LRRC9	Q6ZRR7	1453 aa		32.92	■■■□□ 2.86
CD6-208	ENST00000538288	RIMS1	Q86UR5	1692 aa	Known RBP	32.9	■■■□□ 2.86
CD6-208	ENST00000538288	KIDINS220	Q9ULH0	1771 aa		32.88	■■■□□ 2.85
CD6-208	ENST00000538288	FER1L4	A9Z1Z3	1794 aa		32.86	■■■□□ 2.85
CD6-208	ENST00000538288	SPAG9	O60271	1321 aa	Known RBP	32.86	■■■□□ 2.85
CD6-208	ENST00000538288	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.85	■■■□□ 2.85
CD6-208	ENST00000538288	AGL	P35573	1532 aa		32.84	■■■□□ 2.85
CD6-208	ENST00000538288	ATP7A	Q04656	1500 aa		32.82	■■■□□ 2.85
CD6-208	ENST00000538288	APLP2	Q06481	763 aa		32.82	■■■□□ 2.84
CD6-208	ENST00000538288	MLEC	Q14165	292 aa		32.81	■■■□□ 2.84
CD6-208	ENST00000538288	INO80	Q9ULG1	1556 aa	Predicted RBP	32.81	■■■□□ 2.84
CD6-208	ENST00000538288	CAMSAP2	Q08AD1	1489 aa		32.76	■■■□□ 2.84
CD6-208	ENST00000538288	MBD5	Q9P267	1494 aa		32.76	■■■□□ 2.84
CD6-208	ENST00000538288	RSPH4A	Q5TD94	716 aa		32.74	■■■□□ 2.83
CD6-208	ENST00000538288	ZNF644	Q9H582	1327 aa	Predicted RBP	32.73	■■■□□ 2.83
CD6-208	ENST00000538288	CCDC141	Q6ZP82	1450 aa		32.72	■■■□□ 2.83
CD6-208	ENST00000538288	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.7	■■■□□ 2.83
CD6-208	ENST00000538288	ADGB	Q8N7X0	1667 aa		32.69	■■■□□ 2.82
CD6-208	ENST00000538288	KANK4	Q5T7N3	995 aa	Predicted RBP	32.68	■■■□□ 2.82
CD6-208	ENST00000538288	MIA2	Q96PC5	1412 aa		32.68	■■■□□ 2.82
CD6-208	ENST00000538288	ARHGEF5	Q12774	1597 aa		32.67	■■■□□ 2.82
CD6-208	ENST00000538288	A2M	P01023	1474 aa		32.67	■■■□□ 2.82
CD6-208	ENST00000538288	PLXNC1	O60486	1568 aa		32.66	■■■□□ 2.82
CD6-208	ENST00000538288	ESF1	Q9H501	851 aa	Known RBP	32.66	■■■□□ 2.82
CD6-208	ENST00000538288	MYOM3	Q5VTT5	1437 aa		32.66	■■■□□ 2.82
CD6-208	ENST00000538288	CNTLN	Q9NXG0	1405 aa		32.63	■■■□□ 2.81
CD6-208	ENST00000538288	LMTK3	Q96Q04	1460 aa		32.58	■■■□□ 2.81
CD6-208	ENST00000538288	PLPPR3	Q6T4P5	718 aa		32.57	■■■□□ 2.8
CD6-208	ENST00000538288	TSPY4	P0CV99	314 aa		32.56	■■■□□ 2.8
CD6-208	ENST00000538288	TSPY10	P0CW01	314 aa		32.56	■■■□□ 2.8
CD6-208	ENST00000538288	MROH2A	A6NES4	1674 aa		32.53	■■■□□ 2.8
CD6-208	ENST00000538288	PREX1	Q8TCU6	1659 aa		32.52	■■■□□ 2.8
CD6-208	ENST00000538288	DHX29	Q7Z478	1369 aa	Known RBP	32.51	■■■□□ 2.79
CD6-208	ENST00000538288	C3	P01024	1663 aa		32.5	■■■□□ 2.79
CD6-208	ENST00000538288	MAST1	Q9Y2H9	1570 aa		32.5	■■■□□ 2.79
CD6-208	ENST00000538288	PPP6R1	Q9UPN7	881 aa		32.49	■■■□□ 2.79
CD6-208	ENST00000538288	SETD1B	Q9UPS6	1966 aa	Known RBP	32.48	■■■□□ 2.79
CD6-208	ENST00000538288	PTPN23	Q9H3S7	1636 aa		32.45	■■■□□ 2.79
CD6-208	ENST00000538288	CEBPA	P49715	358 aa	Predicted RBP	32.44	■■■□□ 2.78
CD6-208	ENST00000538288	FAM135A	Q9P2D6	1515 aa		32.43	■■■□□ 2.78
CD6-208	ENST00000538288	UHRF1BP1	Q6BDS2	1440 aa		32.43	■■■□□ 2.78
CD6-208	ENST00000538288	FGD6	Q6ZV73	1430 aa		32.42	■■■□□ 2.78
CD6-208	ENST00000538288	GGT6	Q6P531	493 aa		32.41	■■■□□ 2.78
CD6-208	ENST00000538288	CLTC	Q00610	1675 aa	Known RBP	32.4	■■■□□ 2.78
CD6-208	ENST00000538288	NPAT	Q14207	1427 aa		32.39	■■■□□ 2.78
CD6-208	ENST00000538288	SHANK2	Q9UPX8	1470 aa		32.39	■■■□□ 2.78
CD6-208	ENST00000538288	TCOF1	Q13428	1488 aa	Known RBP	32.38	■■■□□ 2.77
CD6-208	ENST00000538288	ZMYM3	Q14202	1370 aa		32.36	■■■□□ 2.77
CD6-208	ENST00000538288	CROCC2	H7BZ55	1655 aa		32.36	■■■□□ 2.77
CD6-208	ENST00000538288	KIF3B	O15066	747 aa		32.34	■■■□□ 2.77
CD6-208	ENST00000538288	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.33	■■■□□ 2.77
CD6-208	ENST00000538288	DNMT1	P26358	1616 aa	Known RBP	32.32	■■■□□ 2.76
CD6-208	ENST00000538288	KDM5D	Q9BY66	1539 aa		32.31	■■■□□ 2.76
CD6-208	ENST00000538288	HSPA2	P54652	639 aa		32.3	■■■□□ 2.76
CD6-208	ENST00000538288	DUOX2	Q9NRD8	1548 aa		32.29	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms