RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 SUPT6HQ7KZ85 1726 aaKnown RBP18.06■□□□□ 0.48
SNHG1-206ENST00000537925 RICTORQ6R327 1708 aa18.06■□□□□ 0.48
SNHG1-206ENST00000537925 AKNAQ7Z591 1439 aa18.05■□□□□ 0.48
SNHG1-206ENST00000537925 ARHGAP5Q13017 1502 aa18.04■□□□□ 0.48
SNHG1-206ENST00000537925 LRRC9Q6ZRR7 1453 aa18.04■□□□□ 0.48
SNHG1-206ENST00000537925 FRMPD1Q5SYB0 1578 aa18.03■□□□□ 0.48
SNHG1-206ENST00000537925 ITSN2Q9NZM3 1697 aa18.02■□□□□ 0.48
SNHG1-206ENST00000537925 GPATCH8Q9UKJ3 1502 aaKnown RBP18.02■□□□□ 0.47
SNHG1-206ENST00000537925 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
SNHG1-206ENST00000537925 ADGRL1O94910 1474 aa17.99■□□□□ 0.47
SNHG1-206ENST00000537925 DENND4BO75064 1496 aaPredicted RBP17.99■□□□□ 0.47
SNHG1-206ENST00000537925 NCOA2Q15596 1464 aa17.99■□□□□ 0.47
SNHG1-206ENST00000537925 KANK4Q5T7N3 995 aaPredicted RBP17.97■□□□□ 0.47
SNHG1-206ENST00000537925 CCNB3Q8WWL7 1395 aa17.97■□□□□ 0.47
SNHG1-206ENST00000537925 SAMD9LQ8IVG5 1584 aa17.96■□□□□ 0.47
SNHG1-206ENST00000537925 RAPGEF3O95398 923 aa17.96■□□□□ 0.47
SNHG1-206ENST00000537925 ABCC1P33527 1531 aa17.96■□□□□ 0.47
SNHG1-206ENST00000537925 SCAPERQ9BY12 1400 aa17.96■□□□□ 0.47
SNHG1-206ENST00000537925 APLP2Q06481 763 aa17.95■□□□□ 0.46
SNHG1-206ENST00000537925 ZMYM4Q5VZL5 1548 aa17.94■□□□□ 0.46
SNHG1-206ENST00000537925 POGZQ7Z3K3 1410 aa17.94■□□□□ 0.46
SNHG1-206ENST00000537925 ARHGEF12Q9NZN5 1544 aa17.92■□□□□ 0.46
SNHG1-206ENST00000537925 HRCP23327 699 aa17.91■□□□□ 0.46
SNHG1-206ENST00000537925 KDM5CP41229 1560 aa17.91■□□□□ 0.46
SNHG1-206ENST00000537925 CFDP1Q9UEE9 299 aaPredicted RBP17.9■□□□□ 0.46
SNHG1-206ENST00000537925 ZNF518AQ6AHZ1 1483 aa17.9■□□□□ 0.46
SNHG1-206ENST00000537925 MAGI2Q86UL8 1455 aa17.88■□□□□ 0.45
SNHG1-206ENST00000537925 PLEKHH2Q8IVE3 1493 aa17.88■□□□□ 0.45
SNHG1-206ENST00000537925 ARHGEF40Q8TER5 1519 aa17.88■□□□□ 0.45
SNHG1-206ENST00000537925 SYCP2Q9BX26 1530 aa17.88■□□□□ 0.45
SNHG1-206ENST00000537925 ZNF777Q9ULD5 760 aaPredicted RBP17.87■□□□□ 0.45
SNHG1-206ENST00000537925 KIAA1107Q9UPP5 1409 aa17.87■□□□□ 0.45
SNHG1-206ENST00000537925 TRAPPC8Q9Y2L5 1435 aa17.86■□□□□ 0.45
SNHG1-206ENST00000537925 HECW2Q9P2P5 1572 aa17.85■□□□□ 0.45
SNHG1-206ENST00000537925 ZFYVE16Q7Z3T8 1539 aa17.85■□□□□ 0.45
SNHG1-206ENST00000537925 MYOM3Q5VTT5 1437 aa17.84■□□□□ 0.45
SNHG1-206ENST00000537925 AFAP1Q8N556 730 aa17.83■□□□□ 0.45
SNHG1-206ENST00000537925 FBXO41Q8TF61 875 aa17.83■□□□□ 0.45
SNHG1-206ENST00000537925 KIDINS220Q9ULH0 1771 aa17.83■□□□□ 0.45
SNHG1-206ENST00000537925 CAMSAP2Q08AD1 1489 aa17.83■□□□□ 0.44
SNHG1-206ENST00000537925 ZNF644Q9H582 1327 aaPredicted RBP17.83■□□□□ 0.44
SNHG1-206ENST00000537925 MLH3Q9UHC1 1453 aa17.82■□□□□ 0.44
SNHG1-206ENST00000537925 MIA2Q96PC5 1412 aa17.82■□□□□ 0.44
SNHG1-206ENST00000537925 YEATS2Q9ULM3 1422 aa17.82■□□□□ 0.44
SNHG1-206ENST00000537925 MBD5Q9P267 1494 aa17.81■□□□□ 0.44
SNHG1-206ENST00000537925 HNRNPMP52272 730 aaKnown RBP eCLIP17.81■□□□□ 0.44
SNHG1-206ENST00000537925 SIGLEC1Q9BZZ2 1709 aa17.8■□□□□ 0.44
SNHG1-206ENST00000537925 ABCA6Q8N139 1617 aa17.79■□□□□ 0.44
SNHG1-206ENST00000537925 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
SNHG1-206ENST00000537925 INO80Q9ULG1 1556 aaPredicted RBP17.79■□□□□ 0.44
SNHG1-206ENST00000537925 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
SNHG1-206ENST00000537925 PTPN23Q9H3S7 1636 aa17.78■□□□□ 0.44
SNHG1-206ENST00000537925 PCGF6Q9BYE7 350 aa17.77■□□□□ 0.44
SNHG1-206ENST00000537925 ATP10AO60312 1499 aa17.76■□□□□ 0.43
SNHG1-206ENST00000537925 ATP7AQ04656 1500 aa17.76■□□□□ 0.43
SNHG1-206ENST00000537925 REREQ9P2R6 1566 aa17.75■□□□□ 0.43
SNHG1-206ENST00000537925 BCORL1Q5H9F3 1711 aa17.75■□□□□ 0.43
SNHG1-206ENST00000537925 CCDC141Q6ZP82 1450 aa17.75■□□□□ 0.43
SNHG1-206ENST00000537925 FGD6Q6ZV73 1430 aa17.74■□□□□ 0.43
SNHG1-206ENST00000537925 SPAG9O60271 1321 aaKnown RBP17.73■□□□□ 0.43
SNHG1-206ENST00000537925 C9orf84Q5VXU9 1444 aa17.73■□□□□ 0.43
SNHG1-206ENST00000537925 TCOF1Q13428 1488 aaKnown RBP17.72■□□□□ 0.43
SNHG1-206ENST00000537925 RSPH4AQ5TD94 716 aa17.72■□□□□ 0.43
SNHG1-206ENST00000537925 ADGBQ8N7X0 1667 aa17.72■□□□□ 0.43
SNHG1-206ENST00000537925 CROCC2H7BZ55 1655 aa17.71■□□□□ 0.43
SNHG1-206ENST00000537925 ADAMTSL3P82987 1691 aa17.71■□□□□ 0.43
SNHG1-206ENST00000537925 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.43
SNHG1-206ENST00000537925 MYT1LQ9UL68 1186 aa17.71■□□□□ 0.43
SNHG1-206ENST00000537925 RTEL1-TNFRSF6BF6WH68 1400 aa17.7■□□□□ 0.42
SNHG1-206ENST00000537925 MAST1Q9Y2H9 1570 aa17.7■□□□□ 0.42
SNHG1-206ENST00000537925 DNMT1P26358 1616 aaKnown RBP17.68■□□□□ 0.42
SNHG1-206ENST00000537925 AGLP35573 1532 aa17.67■□□□□ 0.42
SNHG1-206ENST00000537925 PLXNC1O60486 1568 aa17.67■□□□□ 0.42
SNHG1-206ENST00000537925 PPARGC1BQ86YN6 1023 aaKnown RBP17.67■□□□□ 0.42
SNHG1-206ENST00000537925 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
SNHG1-206ENST00000537925 MADDQ8WXG6 1647 aa17.65■□□□□ 0.42
SNHG1-206ENST00000537925 LMTK3Q96Q04 1460 aa17.64■□□□□ 0.41
SNHG1-206ENST00000537925 FER1L4A9Z1Z3 1794 aa17.64■□□□□ 0.41
SNHG1-206ENST00000537925 ABCC5O15440 1437 aa17.63■□□□□ 0.41
SNHG1-206ENST00000537925 A2MP01023 1474 aa17.63■□□□□ 0.41
SNHG1-206ENST00000537925 TSPY4P0CV99 314 aa17.63■□□□□ 0.41
SNHG1-206ENST00000537925 TSPY10P0CW01 314 aa17.63■□□□□ 0.41
SNHG1-206ENST00000537925 SHANK2Q9UPX8 1470 aa17.63■□□□□ 0.41
SNHG1-206ENST00000537925 DAPK1P53355 1430 aa17.63■□□□□ 0.41
SNHG1-206ENST00000537925 RIMS1Q86UR5 1692 aaKnown RBP17.61■□□□□ 0.41
SNHG1-206ENST00000537925 DHX29Q7Z478 1369 aaKnown RBP17.58■□□□□ 0.4
SNHG1-206ENST00000537925 FAM50AQ14320 339 aaKnown RBP17.56■□□□□ 0.4
SNHG1-206ENST00000537925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.56■□□□□ 0.47e-33■□□□□ 8.4
SNHG1-206ENST00000537925 MLECQ14165 292 aa17.56■□□□□ 0.4
SNHG1-206ENST00000537925 PTPRMP28827 1452 aa17.55■□□□□ 0.4
SNHG1-206ENST00000537925 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
SNHG1-206ENST00000537925 EIF2AK4Q9P2K8 1649 aaKnown RBP17.55■□□□□ 0.4
SNHG1-206ENST00000537925 DUOX2Q9NRD8 1548 aa17.53■□□□□ 0.4
SNHG1-206ENST00000537925 SOCS7O14512 581 aa17.53■□□□□ 0.4
SNHG1-206ENST00000537925 ADGRL2O95490 1459 aa17.53■□□□□ 0.4
SNHG1-206ENST00000537925 MROH2AA6NES4 1674 aa17.52■□□□□ 0.39
SNHG1-206ENST00000537925 RNF17Q9BXT8 1623 aaKnown RBP17.51■□□□□ 0.39
SNHG1-206ENST00000537925 PTPRKQ15262 1439 aa17.5■□□□□ 0.39
SNHG1-206ENST00000537925 NCOA1Q15788 1441 aa17.5■□□□□ 0.39
SNHG1-206ENST00000537925 CLTCQ00610 1675 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms