RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 L3MBTL3Q96JM7 780 aaPredicted RBP4.96□□□□□ -1.62
TNFRSF1A-210ENST00000537842 TMC2Q8TDI7 906 aa4.95□□□□□ -1.62
TNFRSF1A-210ENST00000537842 ILDR1Q86SU0 546 aaPredicted RBP4.94□□□□□ -1.62
TNFRSF1A-210ENST00000537842 WDR70Q9NW82 654 aa4.94□□□□□ -1.62
TNFRSF1A-210ENST00000537842 LARP6Q9BRS8 491 aaKnown RBP4.93□□□□□ -1.62
TNFRSF1A-210ENST00000537842 SCUBE2Q9NQ36 999 aa4.93□□□□□ -1.62
TNFRSF1A-210ENST00000537842 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.93□□□□□ -1.62
TNFRSF1A-210ENST00000537842 BICRAQ9NZM4 1560 aa4.93□□□□□ -1.62
TNFRSF1A-210ENST00000537842 POTEB2H3BUK9 544 aa4.92□□□□□ -1.62
TNFRSF1A-210ENST00000537842 C2orf72A6NCS6 295 aa4.91□□□□□ -1.62
TNFRSF1A-210ENST00000537842 SLAIN1Q8ND83 568 aa4.91□□□□□ -1.62
TNFRSF1A-210ENST00000537842 DDX27Q96GQ7 796 aaKnown RBP4.91□□□□□ -1.62
TNFRSF1A-210ENST00000537842 KDM2AQ9Y2K7 1162 aa4.91□□□□□ -1.62
TNFRSF1A-210ENST00000537842 NCKAP5LQ9HCH0 1330 aa4.91□□□□□ -1.62
TNFRSF1A-210ENST00000537842 PPP1R15BQ5SWA1 713 aa4.9□□□□□ -1.63
TNFRSF1A-210ENST00000537842 UPF1Q92900 1129 aaKnown RBP eCLIP4.9□□□□□ -1.63
TNFRSF1A-210ENST00000537842 POTEJP0CG39 1038 aa4.89□□□□□ -1.63
TNFRSF1A-210ENST00000537842 PDE4AP27815 886 aa4.89□□□□□ -1.63
TNFRSF1A-210ENST00000537842 LHX8Q68G74 356 aa4.89□□□□□ -1.63
TNFRSF1A-210ENST00000537842 TMEM92Q6UXU6 159 aa4.89□□□□□ -1.63
TNFRSF1A-210ENST00000537842 VSIG10Q8N0Z9 540 aa4.89□□□□□ -1.63
TNFRSF1A-210ENST00000537842 UNC13AQ9UPW8 1703 aa4.89□□□□□ -1.63
TNFRSF1A-210ENST00000537842 SCRIBQ14160 1630 aa4.88□□□□□ -1.63
TNFRSF1A-210ENST00000537842 DSG2Q14126 1118 aa4.88□□□□□ -1.63
TNFRSF1A-210ENST00000537842 MAMSTRQ6ZN01 415 aa4.88□□□□□ -1.63
TNFRSF1A-210ENST00000537842 TMEM121BQ9BXQ6 578 aaPredicted RBP4.88□□□□□ -1.63
TNFRSF1A-210ENST00000537842 CRISPLD2Q9H0B8 497 aa4.88□□□□□ -1.63
TNFRSF1A-210ENST00000537842 PLPP6Q8IY26 295 aa4.87□□□□□ -1.63
TNFRSF1A-210ENST00000537842 KCNV2Q8TDN2 545 aa4.86□□□□□ -1.63
TNFRSF1A-210ENST00000537842 GPHNQ9NQX3 736 aaPredicted RBP4.86□□□□□ -1.63
TNFRSF1A-210ENST00000537842 SHROOM4Q9ULL8 1493 aa4.85□□□□□ -1.63
TNFRSF1A-210ENST00000537842 NBR1Q14596 966 aa4.84□□□□□ -1.63
TNFRSF1A-210ENST00000537842 E2F4Q16254 413 aa4.84□□□□□ -1.63
TNFRSF1A-210ENST00000537842 P3H3Q8IVL6 736 aa4.84□□□□□ -1.63
TNFRSF1A-210ENST00000537842 OTUD5Q96G74 571 aa4.84□□□□□ -1.63
TNFRSF1A-210ENST00000537842 BCANQ96GW7 911 aa4.84□□□□□ -1.63
TNFRSF1A-210ENST00000537842 DPYSL4O14531 572 aa4.83□□□□□ -1.64
TNFRSF1A-210ENST00000537842 KIF3CO14782 793 aa4.83□□□□□ -1.64
TNFRSF1A-210ENST00000537842 FOXK1P85037 733 aa4.83□□□□□ -1.64
TNFRSF1A-210ENST00000537842 ZNF710Q8N1W2 664 aa4.83□□□□□ -1.64
TNFRSF1A-210ENST00000537842 MFSD10Q14728 455 aa4.82□□□□□ -1.64
TNFRSF1A-210ENST00000537842 EMILIN3Q9NT22 766 aa4.81□□□□□ -1.64
TNFRSF1A-210ENST00000537842 ZNF316A6NFI3 1004 aaPredicted RBP4.8□□□□□ -1.64
TNFRSF1A-210ENST00000537842 RIMBP2O15034 1052 aa4.8□□□□□ -1.64
TNFRSF1A-210ENST00000537842 MAP3K9P80192 1104 aa4.8□□□□□ -1.64
TNFRSF1A-210ENST00000537842 DOK7Q18PE1 504 aa4.8□□□□□ -1.64
TNFRSF1A-210ENST00000537842 KHSRPQ92945 711 aaKnown RBP eCLIP4.79□□□□□ -1.64
TNFRSF1A-210ENST00000537842 CECR2Q9BXF3 1484 aa4.79□□□□□ -1.64
TNFRSF1A-210ENST00000537842 NUDT7P0C024 238 aa4.78□□□□□ -1.64
TNFRSF1A-210ENST00000537842 ARSIQ5FYB1 569 aa4.78□□□□□ -1.64
TNFRSF1A-210ENST00000537842 SNPHO15079 494 aa4.77□□□□□ -1.65
TNFRSF1A-210ENST00000537842 HOXB3P14651 431 aaPredicted RBP4.77□□□□□ -1.65
TNFRSF1A-210ENST00000537842 DDX12PQ92771 950 aa4.77□□□□□ -1.65
TNFRSF1A-210ENST00000537842 FAM163AQ96GL9 167 aaPredicted RBP4.77□□□□□ -1.65
TNFRSF1A-210ENST00000537842 PCDHGA4Q9Y5G9 962 aa4.77□□□□□ -1.65
TNFRSF1A-210ENST00000537842 GRXCR2A6NFK2 248 aa4.76□□□□□ -1.65
TNFRSF1A-210ENST00000537842 SEMA3EO15041 775 aa4.76□□□□□ -1.65
TNFRSF1A-210ENST00000537842 TBC1D12O60347 775 aa4.76□□□□□ -1.65
TNFRSF1A-210ENST00000537842 EIF4G1Q04637 1599 aaKnown RBP4.76□□□□□ -1.65
TNFRSF1A-210ENST00000537842 CAMK2BQ13554 666 aa4.76□□□□□ -1.65
TNFRSF1A-210ENST00000537842 MARVELD3Q96A59 401 aa4.76□□□□□ -1.65
TNFRSF1A-210ENST00000537842 EVI5O60447 810 aa4.75□□□□□ -1.65
TNFRSF1A-210ENST00000537842 OXER1Q8TDS5 423 aa4.75□□□□□ -1.65
TNFRSF1A-210ENST00000537842 ARHGEF1Q92888 912 aaKnown RBP4.75□□□□□ -1.65
TNFRSF1A-210ENST00000537842 PRKCSHP14314 528 aaPredicted RBP4.74□□□□□ -1.65
TNFRSF1A-210ENST00000537842 EMP3P54852 163 aa4.74□□□□□ -1.65
TNFRSF1A-210ENST00000537842 CC2D2AQ9P2K1 1620 aa4.74□□□□□ -1.65
TNFRSF1A-210ENST00000537842 TULP1O00294 542 aaPredicted RBP4.73□□□□□ -1.65
TNFRSF1A-210ENST00000537842 MLLT3P42568 568 aaPredicted RBP4.73□□□□□ -1.65
TNFRSF1A-210ENST00000537842 PDIA6Q15084 440 aa4.73□□□□□ -1.65
TNFRSF1A-210ENST00000537842 RBM33Q96EV2 1170 aaKnown RBP4.73□□□□□ -1.65
TNFRSF1A-210ENST00000537842 ST18O60284 1047 aa4.72□□□□□ -1.65
TNFRSF1A-210ENST00000537842 ZNF454Q8N9F8 522 aa4.72□□□□□ -1.65
TNFRSF1A-210ENST00000537842 PTCD2Q8WV60 388 aaKnown RBP4.72□□□□□ -1.65
TNFRSF1A-210ENST00000537842 SPDYE16A6NNV3 312 aaPredicted RBP4.71□□□□□ -1.66
TNFRSF1A-210ENST00000537842 SLC34A2O95436 690 aa4.71□□□□□ -1.66
TNFRSF1A-210ENST00000537842 LHX6Q9UPM6 363 aa4.71□□□□□ -1.66
TNFRSF1A-210ENST00000537842 ERBB3P21860 1342 aa4.71□□□□□ -1.66
TNFRSF1A-210ENST00000537842 FAM205CA6NFA0 338 aa4.7□□□□□ -1.66
TNFRSF1A-210ENST00000537842 MAP3K7O43318 606 aa4.7□□□□□ -1.66
TNFRSF1A-210ENST00000537842 VARS2Q5ST30 1063 aaKnown RBP4.7□□□□□ -1.66
TNFRSF1A-210ENST00000537842 GPR153Q6NV75 609 aa4.7□□□□□ -1.66
TNFRSF1A-210ENST00000537842 MROH2BQ7Z745 1585 aa4.7□□□□□ -1.66
TNFRSF1A-210ENST00000537842 ATAD2BQ9ULI0 1458 aa4.69□□□□□ -1.66
TNFRSF1A-210ENST00000537842 NUTM2FA1L443 756 aa4.69□□□□□ -1.66
TNFRSF1A-210ENST00000537842 HOXB1P14653 301 aaPredicted RBP4.69□□□□□ -1.66
TNFRSF1A-210ENST00000537842 TPRNQ4KMQ1 711 aa4.69□□□□□ -1.66
TNFRSF1A-210ENST00000537842 ZSWIM6Q9HCJ5 1215 aa4.69□□□□□ -1.66
TNFRSF1A-210ENST00000537842 NCAPD3P42695 1498 aa4.69□□□□□ -1.66
TNFRSF1A-210ENST00000537842 TESPA1A2RU30 521 aaPredicted RBP4.68□□□□□ -1.66
TNFRSF1A-210ENST00000537842 PPP4R3BQ5MIZ7 849 aa4.68□□□□□ -1.66
TNFRSF1A-210ENST00000537842 RBM26Q5T8P6 1007 aaKnown RBP4.68□□□□□ -1.66
TNFRSF1A-210ENST00000537842 LMOD2Q6P5Q4 547 aa4.68□□□□□ -1.66
TNFRSF1A-210ENST00000537842 SMYD5Q6GMV2 418 aa4.67□□□□□ -1.66
TNFRSF1A-210ENST00000537842 JPH4Q96JJ6 628 aa4.67□□□□□ -1.66
TNFRSF1A-210ENST00000537842 KCNK17Q96T54 332 aa4.67□□□□□ -1.66
TNFRSF1A-210ENST00000537842 ARIH1Q9Y4X5 557 aaPredicted RBP4.67□□□□□ -1.66
TNFRSF1A-210ENST00000537842 RSF1Q96T23 1441 aaPredicted RBP4.66□□□□□ -1.66
TNFRSF1A-210ENST00000537842 TSR1Q2NL82 804 aaKnown RBP4.66□□□□□ -1.66
TNFRSF1A-210ENST00000537842 TYW1BQ6NUM6 668 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms