RNA–Protein interactions for RNA: ENST00000537578.5

TCF4-205, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-205ENST00000537578 NAIPQ13075 1403 aa13.25□□□□□ -0.29
TCF4-205ENST00000537578 EHBP1L1Q8N3D4 1523 aa13.25□□□□□ -0.29
TCF4-205ENST00000537578 NUP153P49790 1475 aaKnown RBP13.25□□□□□ -0.29
TCF4-205ENST00000537578 PRG4Q92954 1404 aaPredicted RBP13.24□□□□□ -0.29
TCF4-205ENST00000537578 CCDC18Q5T9S5 1454 aa13.24□□□□□ -0.29
TCF4-205ENST00000537578 MAGI1Q96QZ7 1491 aaPredicted RBP13.24□□□□□ -0.29
TCF4-205ENST00000537578 KIAA0556O60303 1618 aa13.23□□□□□ -0.29
TCF4-205ENST00000537578 HECW1Q76N89 1606 aa13.23□□□□□ -0.29
TCF4-205ENST00000537578 PTPN23Q9H3S7 1636 aa13.23□□□□□ -0.29
TCF4-205ENST00000537578 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
TCF4-205ENST00000537578 PPP1R15AO75807 674 aaPredicted RBP13.22□□□□□ -0.29
TCF4-205ENST00000537578 CDK11AQ9UQ88 783 aaPredicted RBP13.21□□□□□ -0.29
TCF4-205ENST00000537578 ARHGEF11O15085 1522 aa13.21□□□□□ -0.3
TCF4-205ENST00000537578 CENPBP07199 599 aaPredicted RBP13.19□□□□□ -0.3
TCF4-205ENST00000537578 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
TCF4-205ENST00000537578 CFDP1Q9UEE9 299 aaPredicted RBP13.19□□□□□ -0.3
TCF4-205ENST00000537578 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
TCF4-205ENST00000537578 NUP160Q12769 1436 aa13.17□□□□□ -0.3
TCF4-205ENST00000537578 UACAQ9BZF9 1416 aa13.16□□□□□ -0.3
TCF4-205ENST00000537578 KDM6BO15054 1643 aa13.16□□□□□ -0.3
TCF4-205ENST00000537578 CARMIL2Q6F5E8 1435 aa13.16□□□□□ -0.3
TCF4-205ENST00000537578 RAPGEF6Q8TEU7 1601 aa13.15□□□□□ -0.3
TCF4-205ENST00000537578 PLEKHD1A6NEE1 506 aa13.15□□□□□ -0.3
TCF4-205ENST00000537578 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
TCF4-205ENST00000537578 TONSLQ96HA7 1378 aa13.15□□□□□ -0.3
TCF4-205ENST00000537578 MIA2Q96PC5 1412 aa13.13□□□□□ -0.31
TCF4-205ENST00000537578 TCOF1Q13428 1488 aaKnown RBP13.13□□□□□ -0.31
TCF4-205ENST00000537578 ABCC5O15440 1437 aa13.13□□□□□ -0.31
TCF4-205ENST00000537578 TROQ12816 1431 aaPredicted RBP13.11□□□□□ -0.31
TCF4-205ENST00000537578 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
TCF4-205ENST00000537578 DENND4BO75064 1496 aaPredicted RBP13.1□□□□□ -0.31
TCF4-205ENST00000537578 DAPK1P53355 1430 aa13.1□□□□□ -0.31
TCF4-205ENST00000537578 PTPRGP23470 1445 aa13.1□□□□□ -0.31
TCF4-205ENST00000537578 ATP10BO94823 1461 aa13.09□□□□□ -0.31
TCF4-205ENST00000537578 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.317e-6■■■□□ 17
TCF4-205ENST00000537578 GPATCH8Q9UKJ3 1502 aaKnown RBP13.08□□□□□ -0.31
TCF4-205ENST00000537578 KIF14Q15058 1648 aa13.08□□□□□ -0.32
TCF4-205ENST00000537578 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
TCF4-205ENST00000537578 CAMSAP2Q08AD1 1489 aa13.03□□□□□ -0.32
TCF4-205ENST00000537578 ERCC6L2Q5T890 1561 aa13.03□□□□□ -0.32
TCF4-205ENST00000537578 AKNAQ7Z591 1439 aa13.01□□□□□ -0.33
TCF4-205ENST00000537578 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
TCF4-205ENST00000537578 ABCA8O94911 1581 aa13.01□□□□□ -0.33
TCF4-205ENST00000537578 CHD1O14646 1710 aa13.01□□□□□ -0.33
TCF4-205ENST00000537578 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
TCF4-205ENST00000537578 NPM2Q86SE8 214 aaKnown RBP13□□□□□ -0.33
TCF4-205ENST00000537578 ROCK1Q13464 1354 aa12.99□□□□□ -0.33
TCF4-205ENST00000537578 HSPA5P11021 654 aaKnown RBP12.99□□□□□ -0.33
TCF4-205ENST00000537578 PKD2Q13563 968 aa12.99□□□□□ -0.33
TCF4-205ENST00000537578 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
TCF4-205ENST00000537578 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
TCF4-205ENST00000537578 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
TCF4-205ENST00000537578 ZNF326Q5BKZ1 582 aaKnown RBP12.98□□□□□ -0.33
TCF4-205ENST00000537578 ANKRD30BQ9BXX2 1392 aa12.98□□□□□ -0.33
TCF4-205ENST00000537578 KDM5BQ9UGL1 1544 aa12.98□□□□□ -0.33
TCF4-205ENST00000537578 FKBP8Q14318 412 aa12.98□□□□□ -0.33
TCF4-205ENST00000537578 GCC2Q8IWJ2 1684 aa12.98□□□□□ -0.33
TCF4-205ENST00000537578 TMEM132AQ24JP5 1023 aa12.97□□□□□ -0.33
TCF4-205ENST00000537578 C11orf95C9JLR9 678 aaPredicted RBP12.96□□□□□ -0.33
TCF4-205ENST00000537578 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.33
TCF4-205ENST00000537578 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
TCF4-205ENST00000537578 NUP155O75694 1391 aa12.93□□□□□ -0.34
TCF4-205ENST00000537578 C14orf37Q86TY3 774 aa12.93□□□□□ -0.34
TCF4-205ENST00000537578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.93□□□□□ -0.34
TCF4-205ENST00000537578 ANKRD50Q9ULJ7 1429 aa12.93□□□□□ -0.34
TCF4-205ENST00000537578 PZPP20742 1482 aa12.92□□□□□ -0.34
TCF4-205ENST00000537578 WASHC2AQ641Q2 1341 aa12.92□□□□□ -0.34
TCF4-205ENST00000537578 CDC42BPAQ5VT25 1732 aa12.92□□□□□ -0.34
TCF4-205ENST00000537578 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
TCF4-205ENST00000537578 EIF4G2P78344 907 aaKnown RBP eCLIP12.92□□□□□ -0.342e-7■■■■■ 31.9
TCF4-205ENST00000537578 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
TCF4-205ENST00000537578 ANP32CO43423 234 aa12.91□□□□□ -0.34
TCF4-205ENST00000537578 KDM2AQ9Y2K7 1162 aa12.91□□□□□ -0.34
TCF4-205ENST00000537578 ADCY10Q96PN6 1610 aa12.89□□□□□ -0.35
TCF4-205ENST00000537578 KIF15Q9NS87 1388 aa12.89□□□□□ -0.35
TCF4-205ENST00000537578 ITSN2Q9NZM3 1697 aa12.89□□□□□ -0.35
TCF4-205ENST00000537578 POLR3GLQ9BT43 218 aa12.88□□□□□ -0.35
TCF4-205ENST00000537578 RPRD2Q5VT52 1461 aaKnown RBP12.88□□□□□ -0.35
TCF4-205ENST00000537578 MBD5Q9P267 1494 aa12.88□□□□□ -0.35
TCF4-205ENST00000537578 ADGRL2O95490 1459 aa12.85□□□□□ -0.35
TCF4-205ENST00000537578 RGL3Q3MIN7 710 aa12.85□□□□□ -0.35
TCF4-205ENST00000537578 KIAA1107Q9UPP5 1409 aa12.85□□□□□ -0.35
TCF4-205ENST00000537578 AFAP1Q8N556 730 aa12.84□□□□□ -0.35
TCF4-205ENST00000537578 CDC42BPBQ9Y5S2 1711 aa12.84□□□□□ -0.35
TCF4-205ENST00000537578 ARHGAP5Q13017 1502 aa12.83□□□□□ -0.35
TCF4-205ENST00000537578 SHROOM2Q13796 1616 aa12.83□□□□□ -0.35
TCF4-205ENST00000537578 CCDC184Q52MB2 194 aa12.83□□□□□ -0.36
TCF4-205ENST00000537578 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
TCF4-205ENST00000537578 SAMD9LQ8IVG5 1584 aa12.83□□□□□ -0.36
TCF4-205ENST00000537578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.83□□□□□ -0.36
TCF4-205ENST00000537578 TEX14Q8IWB6 1497 aa12.83□□□□□ -0.36
TCF4-205ENST00000537578 DCAF11Q8TEB1 546 aa12.83□□□□□ -0.36
TCF4-205ENST00000537578 ABCC2Q92887 1545 aa12.81□□□□□ -0.36
TCF4-205ENST00000537578 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
TCF4-205ENST00000537578 SYCP2Q9BX26 1530 aa12.81□□□□□ -0.36
TCF4-205ENST00000537578 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
TCF4-205ENST00000537578 VSIG10Q8N0Z9 540 aa12.81□□□□□ -0.36
TCF4-205ENST00000537578 EFCAB2Q5VUJ9 269 aa12.8□□□□□ -0.36
TCF4-205ENST00000537578 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
TCF4-205ENST00000537578 ADGBQ8N7X0 1667 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms