RNA–Protein interactions for RNA: ENST00000537400.1

PRKAB1-203, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-203ENST00000537400 EFCAB2Q5VUJ9 269 aa21.75■■□□□ 1.07
PRKAB1-203ENST00000537400 CFDP1Q9UEE9 299 aaPredicted RBP21.74■■□□□ 1.07
PRKAB1-203ENST00000537400 NEO1Q92859 1461 aa21.74■■□□□ 1.07
PRKAB1-203ENST00000537400 CFAP74Q9C0B2 1584 aa21.74■■□□□ 1.07
PRKAB1-203ENST00000537400 FANCAO15360 1455 aa21.73■■□□□ 1.07
PRKAB1-203ENST00000537400 ARHGAP5Q13017 1502 aa21.73■■□□□ 1.07
PRKAB1-203ENST00000537400 PPRC1Q5VV67 1664 aaKnown RBP21.72■■□□□ 1.07
PRKAB1-203ENST00000537400 PPARGC1BQ86YN6 1023 aaKnown RBP21.72■■□□□ 1.07
PRKAB1-203ENST00000537400 CDC42BPBQ9Y5S2 1711 aa21.72■■□□□ 1.07
PRKAB1-203ENST00000537400 TSPOAP1O95153 1857 aa21.69■■□□□ 1.06
PRKAB1-203ENST00000537400 FGD6Q6ZV73 1430 aa21.68■■□□□ 1.06
PRKAB1-203ENST00000537400 PLEKHH2Q8IVE3 1493 aa21.67■■□□□ 1.06
PRKAB1-203ENST00000537400 AKNAQ7Z591 1439 aa21.67■■□□□ 1.06
PRKAB1-203ENST00000537400 KIAA1107Q9UPP5 1409 aa21.64■■□□□ 1.06
PRKAB1-203ENST00000537400 TCOF1Q13428 1488 aaKnown RBP21.63■■□□□ 1.05
PRKAB1-203ENST00000537400 KDM6BO15054 1643 aa21.62■■□□□ 1.05
PRKAB1-203ENST00000537400 SAMD9LQ8IVG5 1584 aa21.62■■□□□ 1.05
PRKAB1-203ENST00000537400 ZNF777Q9ULD5 760 aaPredicted RBP21.62■■□□□ 1.05
PRKAB1-203ENST00000537400 ADGRL1O94910 1474 aa21.62■■□□□ 1.05
PRKAB1-203ENST00000537400 CAMSAP2Q08AD1 1489 aa21.61■■□□□ 1.05
PRKAB1-203ENST00000537400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.61■■□□□ 1.05
PRKAB1-203ENST00000537400 ABCC1P33527 1531 aa21.6■■□□□ 1.05
PRKAB1-203ENST00000537400 PTPN23Q9H3S7 1636 aa21.6■■□□□ 1.05
PRKAB1-203ENST00000537400 RRBP1Q9P2E9 1410 aaKnown RBP21.6■■□□□ 1.05
PRKAB1-203ENST00000537400 RSPH4AQ5TD94 716 aa21.59■■□□□ 1.05
PRKAB1-203ENST00000537400 SCAPERQ9BY12 1400 aa21.58■■□□□ 1.05
PRKAB1-203ENST00000537400 ZNF644Q9H582 1327 aaPredicted RBP21.57■■□□□ 1.04
PRKAB1-203ENST00000537400 DENND4BO75064 1496 aaPredicted RBP21.57■■□□□ 1.04
PRKAB1-203ENST00000537400 SYCP2Q9BX26 1530 aa21.55■■□□□ 1.04
PRKAB1-203ENST00000537400 MBD5Q9P267 1494 aa21.54■■□□□ 1.04
PRKAB1-203ENST00000537400 ARHGEF12Q9NZN5 1544 aa21.54■■□□□ 1.04
PRKAB1-203ENST00000537400 POGZQ7Z3K3 1410 aa21.54■■□□□ 1.04
PRKAB1-203ENST00000537400 ARHGEF5Q12774 1597 aa21.53■■□□□ 1.04
PRKAB1-203ENST00000537400 ZNF518AQ6AHZ1 1483 aa21.53■■□□□ 1.04
PRKAB1-203ENST00000537400 HNRNPMP52272 730 aaKnown RBP eCLIP21.51■■□□□ 1.03
PRKAB1-203ENST00000537400 COL17A1Q9UMD9 1497 aaPredicted RBP21.51■■□□□ 1.03
PRKAB1-203ENST00000537400 FAM50AQ14320 339 aaKnown RBP21.5■■□□□ 1.03
PRKAB1-203ENST00000537400 CCDC141Q6ZP82 1450 aa21.5■■□□□ 1.03
PRKAB1-203ENST00000537400 TRAPPC8Q9Y2L5 1435 aa21.49■■□□□ 1.03
PRKAB1-203ENST00000537400 KDM5CP41229 1560 aa21.48■■□□□ 1.03
PRKAB1-203ENST00000537400 RICTORQ6R327 1708 aa21.47■■□□□ 1.03
PRKAB1-203ENST00000537400 RAPGEF3O95398 923 aa21.47■■□□□ 1.03
PRKAB1-203ENST00000537400 FRMPD1Q5SYB0 1578 aa21.46■■□□□ 1.03
PRKAB1-203ENST00000537400 DNMT1P26358 1616 aaKnown RBP21.46■■□□□ 1.03
PRKAB1-203ENST00000537400 ZMYM4Q5VZL5 1548 aa21.45■■□□□ 1.02
PRKAB1-203ENST00000537400 KDM4FA0A1W2PPD8 638 aa21.45■■□□□ 1.02
PRKAB1-203ENST00000537400 AFAP1Q8N556 730 aa21.45■■□□□ 1.02
PRKAB1-203ENST00000537400 ABCC5O15440 1437 aa21.45■■□□□ 1.02
PRKAB1-203ENST00000537400 DAPK1P53355 1430 aa21.45■■□□□ 1.02
PRKAB1-203ENST00000537400 MAGI2Q86UL8 1455 aa21.45■■□□□ 1.02
PRKAB1-203ENST00000537400 SHANK2Q9UPX8 1470 aa21.45■■□□□ 1.02
PRKAB1-203ENST00000537400 TSPY4P0CV99 314 aa21.44■■□□□ 1.02
PRKAB1-203ENST00000537400 TSPY10P0CW01 314 aa21.44■■□□□ 1.02
PRKAB1-203ENST00000537400 MLH3Q9UHC1 1453 aa21.44■■□□□ 1.02
PRKAB1-203ENST00000537400 RTEL1-TNFRSF6BF6WH68 1400 aa21.43■■□□□ 1.02
PRKAB1-203ENST00000537400 SPAG9O60271 1321 aaKnown RBP21.42■■□□□ 1.02
PRKAB1-203ENST00000537400 MAST1Q9Y2H9 1570 aa21.41■■□□□ 1.02
PRKAB1-203ENST00000537400 HECW2Q9P2P5 1572 aa21.4■■□□□ 1.02
PRKAB1-203ENST00000537400 CROCC2H7BZ55 1655 aa21.39■■□□□ 1.01
PRKAB1-203ENST00000537400 C9orf84Q5VXU9 1444 aa21.38■■□□□ 1.01
PRKAB1-203ENST00000537400 INO80Q9ULG1 1556 aaPredicted RBP21.37■■□□□ 1.01
PRKAB1-203ENST00000537400 ATP7AQ04656 1500 aa21.36■■□□□ 1.01
PRKAB1-203ENST00000537400 ZFYVE16Q7Z3T8 1539 aa21.36■■□□□ 1.01
PRKAB1-203ENST00000537400 ADGRL2O95490 1459 aa21.34■■□□□ 1.01
PRKAB1-203ENST00000537400 ROCK1Q13464 1354 aa21.34■■□□□ 1.01
PRKAB1-203ENST00000537400 PTPRKQ15262 1439 aa21.33■■□□□ 1.01
PRKAB1-203ENST00000537400 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1.01
PRKAB1-203ENST00000537400 ANKRD30AQ9BXX3 1397 aa21.33■■□□□ 1
PRKAB1-203ENST00000537400 KIDINS220Q9ULH0 1771 aa21.33■■□□□ 1
PRKAB1-203ENST00000537400 MYT1LQ9UL68 1186 aa21.32■■□□□ 1
PRKAB1-203ENST00000537400 PLXNC1O60486 1568 aa21.31■■□□□ 1
PRKAB1-203ENST00000537400 ARHGEF40Q8TER5 1519 aa21.31■■□□□ 1
PRKAB1-203ENST00000537400 NCOA1Q15788 1441 aa21.3■■□□□ 1
PRKAB1-203ENST00000537400 YEATS2Q9ULM3 1422 aa21.29■■□□□ 1
PRKAB1-203ENST00000537400 ADGBQ8N7X0 1667 aa21.29■■□□□ 1
PRKAB1-203ENST00000537400 ITGAEP38570 1179 aa21.29■■□□□ 1
PRKAB1-203ENST00000537400 DIP2CQ9Y2E4 1556 aa21.28■■□□□ 1
PRKAB1-203ENST00000537400 ATP10AO60312 1499 aa21.28■■□□□ 1
PRKAB1-203ENST00000537400 CHIC2Q9UKJ5 165 aa21.28■■□□□ 1
PRKAB1-203ENST00000537400 REREQ9P2R6 1566 aa21.27■□□□□ 0.99
PRKAB1-203ENST00000537400 ABCA6Q8N139 1617 aa21.26■□□□□ 0.99
PRKAB1-203ENST00000537400 KIF15Q9NS87 1388 aa21.25■□□□□ 0.99
PRKAB1-203ENST00000537400 DUOX2Q9NRD8 1548 aa21.24■□□□□ 0.99
PRKAB1-203ENST00000537400 A2MP01023 1474 aa21.24■□□□□ 0.99
PRKAB1-203ENST00000537400 DHX29Q7Z478 1369 aaKnown RBP21.23■□□□□ 0.99
PRKAB1-203ENST00000537400 RRP7BPQ9NSQ0 103 aa21.22■□□□□ 0.99
PRKAB1-203ENST00000537400 HFM1A2PYH4 1435 aa21.21■□□□□ 0.99
PRKAB1-203ENST00000537400 ERBINQ96RT1 1412 aa21.21■□□□□ 0.99
PRKAB1-203ENST00000537400 AGLP35573 1532 aa21.19■□□□□ 0.98
PRKAB1-203ENST00000537400 NAIPQ13075 1403 aa21.17■□□□□ 0.98
PRKAB1-203ENST00000537400 ANKRD50Q9ULJ7 1429 aa21.17■□□□□ 0.98
PRKAB1-203ENST00000537400 EIF2AK4Q9P2K8 1649 aaKnown RBP21.15■□□□□ 0.98
PRKAB1-203ENST00000537400 GCC2Q8IWJ2 1684 aa21.15■□□□□ 0.98
PRKAB1-203ENST00000537400 BCORL1Q5H9F3 1711 aa21.14■□□□□ 0.97
PRKAB1-203ENST00000537400 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
PRKAB1-203ENST00000537400 SETD5Q9C0A6 1442 aa21.11■□□□□ 0.97
PRKAB1-203ENST00000537400 KIF3BO15066 747 aa21.09■□□□□ 0.97
PRKAB1-203ENST00000537400 ARID4BQ4LE39 1312 aaPredicted RBP21.08■□□□□ 0.97
PRKAB1-203ENST00000537400 HRCP23327 699 aa21.08■□□□□ 0.97
PRKAB1-203ENST00000537400 PPP6R1Q9UPN7 881 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms