RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 BCORL1Q5H9F3 1711 aa16.02■□□□□ 0.16
CCDC170-202ENST00000537358 PLCH2O75038 1416 aa16.02■□□□□ 0.15
CCDC170-202ENST00000537358 ZMYM4Q5VZL5 1548 aa16■□□□□ 0.15
CCDC170-202ENST00000537358 MAGI2Q86UL8 1455 aa16■□□□□ 0.15
CCDC170-202ENST00000537358 EFCAB2Q5VUJ9 269 aa16■□□□□ 0.15
CCDC170-202ENST00000537358 POGZQ7Z3K3 1410 aa16■□□□□ 0.15
CCDC170-202ENST00000537358 ZFYVE16Q7Z3T8 1539 aa15.99■□□□□ 0.15
CCDC170-202ENST00000537358 PTPRMP28827 1452 aa15.99■□□□□ 0.15
CCDC170-202ENST00000537358 TROQ12816 1431 aaPredicted RBP15.99■□□□□ 0.15
CCDC170-202ENST00000537358 SCAPERQ9BY12 1400 aa15.98■□□□□ 0.15
CCDC170-202ENST00000537358 MADDQ8WXG6 1647 aa15.97■□□□□ 0.15
CCDC170-202ENST00000537358 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
CCDC170-202ENST00000537358 ARHGAP5Q13017 1502 aa15.96■□□□□ 0.15
CCDC170-202ENST00000537358 LRRIQ1Q96JM4 1722 aa15.96■□□□□ 0.15
CCDC170-202ENST00000537358 CASKIN1Q8WXD9 1431 aa15.95■□□□□ 0.14
CCDC170-202ENST00000537358 PCF11O94913 1555 aaKnown RBP15.94■□□□□ 0.14
CCDC170-202ENST00000537358 RIMS1Q86UR5 1692 aaKnown RBP15.94■□□□□ 0.14
CCDC170-202ENST00000537358 YEATS2Q9ULM3 1422 aa15.92■□□□□ 0.14
CCDC170-202ENST00000537358 ZNF518AQ6AHZ1 1483 aa15.91■□□□□ 0.14
CCDC170-202ENST00000537358 FYCO1Q9BQS8 1478 aa15.91■□□□□ 0.14
CCDC170-202ENST00000537358 MYT1LQ9UL68 1186 aa15.91■□□□□ 0.14
CCDC170-202ENST00000537358 ATP10AO60312 1499 aa15.89■□□□□ 0.13
CCDC170-202ENST00000537358 CDC42BPBQ9Y5S2 1711 aa15.88■□□□□ 0.13
CCDC170-202ENST00000537358 FER1L4A9Z1Z3 1794 aa15.88■□□□□ 0.13
CCDC170-202ENST00000537358 C9orf84Q5VXU9 1444 aa15.88■□□□□ 0.13
CCDC170-202ENST00000537358 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
CCDC170-202ENST00000537358 MLECQ14165 292 aa15.87■□□□□ 0.13
CCDC170-202ENST00000537358 KDM5CP41229 1560 aa15.85■□□□□ 0.13
CCDC170-202ENST00000537358 ILDR1Q86SU0 546 aaPredicted RBP15.85■□□□□ 0.13
CCDC170-202ENST00000537358 SIGLEC1Q9BZZ2 1709 aa15.85■□□□□ 0.13
CCDC170-202ENST00000537358 CDC42BPAQ5VT25 1732 aa15.84■□□□□ 0.13
CCDC170-202ENST00000537358 AFAP1Q8N556 730 aa15.83■□□□□ 0.12
CCDC170-202ENST00000537358 ABCC1P33527 1531 aa15.82■□□□□ 0.12
CCDC170-202ENST00000537358 ITSN2Q9NZM3 1697 aa15.82■□□□□ 0.12
CCDC170-202ENST00000537358 LMTK3Q96Q04 1460 aa15.81■□□□□ 0.12
CCDC170-202ENST00000537358 ARHGEF12Q9NZN5 1544 aa15.8■□□□□ 0.12
CCDC170-202ENST00000537358 MLH3Q9UHC1 1453 aa15.79■□□□□ 0.12
CCDC170-202ENST00000537358 REREQ9P2R6 1566 aa15.79■□□□□ 0.12
CCDC170-202ENST00000537358 DIP2CQ9Y2E4 1556 aa15.79■□□□□ 0.12
CCDC170-202ENST00000537358 MTUS2Q5JR59 1369 aa15.78■□□□□ 0.12
CCDC170-202ENST00000537358 ESF1Q9H501 851 aaKnown RBP15.78■□□□□ 0.12
CCDC170-202ENST00000537358 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
CCDC170-202ENST00000537358 TRAPPC8Q9Y2L5 1435 aa15.77■□□□□ 0.11
CCDC170-202ENST00000537358 ABCA6Q8N139 1617 aa15.76■□□□□ 0.11
CCDC170-202ENST00000537358 CCNB3Q8WWL7 1395 aa15.75■□□□□ 0.11
CCDC170-202ENST00000537358 PLEKHH2Q8IVE3 1493 aa15.75■□□□□ 0.11
CCDC170-202ENST00000537358 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
CCDC170-202ENST00000537358 PREX1Q8TCU6 1659 aa15.74■□□□□ 0.11
CCDC170-202ENST00000537358 CFDP1Q9UEE9 299 aaPredicted RBP15.74■□□□□ 0.11
CCDC170-202ENST00000537358 KIDINS220Q9ULH0 1771 aa15.73■□□□□ 0.11
CCDC170-202ENST00000537358 SAMD9LQ8IVG5 1584 aa15.73■□□□□ 0.11
CCDC170-202ENST00000537358 AGLP35573 1532 aa15.73■□□□□ 0.11
CCDC170-202ENST00000537358 SYCP2Q9BX26 1530 aa15.73■□□□□ 0.11
CCDC170-202ENST00000537358 SETD1BQ9UPS6 1966 aaKnown RBP15.73■□□□□ 0.11
CCDC170-202ENST00000537358 CEP162Q5TB80 1403 aa15.72■□□□□ 0.11
CCDC170-202ENST00000537358 HSPA2P54652 639 aa15.72■□□□□ 0.11
CCDC170-202ENST00000537358 SPAG9O60271 1321 aaKnown RBP15.71■□□□□ 0.11
CCDC170-202ENST00000537358 EHBP1L1Q8N3D4 1523 aa15.71■□□□□ 0.11
CCDC170-202ENST00000537358 KIAA1107Q9UPP5 1409 aa15.69■□□□□ 0.1
CCDC170-202ENST00000537358 CEBPAP49715 358 aaPredicted RBP15.69■□□□□ 0.1
CCDC170-202ENST00000537358 HNRNPMP52272 730 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC170-202ENST00000537358 FBXO41Q8TF61 875 aa15.69■□□□□ 0.1
CCDC170-202ENST00000537358 UHRF1BP1Q6BDS2 1440 aa15.68■□□□□ 0.1
CCDC170-202ENST00000537358 CNTLNQ9NXG0 1405 aa15.68■□□□□ 0.1
CCDC170-202ENST00000537358 ATP7AQ04656 1500 aa15.67■□□□□ 0.1
CCDC170-202ENST00000537358 C3P01024 1663 aa15.67■□□□□ 0.1
CCDC170-202ENST00000537358 SUPT6HQ7KZ85 1726 aaKnown RBP15.65■□□□□ 0.1
CCDC170-202ENST00000537358 TIAM1Q13009 1591 aa15.65■□□□□ 0.1
CCDC170-202ENST00000537358 INO80Q9ULG1 1556 aaPredicted RBP15.64■□□□□ 0.09
CCDC170-202ENST00000537358 DMRT2Q9Y5R5 561 aa15.64■□□□□ 0.09
CCDC170-202ENST00000537358 MROH2AA6NES4 1674 aa15.62■□□□□ 0.09
CCDC170-202ENST00000537358 ADGBQ8N7X0 1667 aa15.62■□□□□ 0.09
CCDC170-202ENST00000537358 A2MP01023 1474 aa15.61■□□□□ 0.09
CCDC170-202ENST00000537358 PLXNC1O60486 1568 aa15.58■□□□□ 0.09
CCDC170-202ENST00000537358 NCOA2Q15596 1464 aa15.58■□□□□ 0.08
CCDC170-202ENST00000537358 RSPH4AQ5TD94 716 aa15.57■□□□□ 0.08
CCDC170-202ENST00000537358 ZNF644Q9H582 1327 aaPredicted RBP15.57■□□□□ 0.08
CCDC170-202ENST00000537358 RTEL1-TNFRSF6BF6WH68 1400 aa15.57■□□□□ 0.08
CCDC170-202ENST00000537358 NPATQ14207 1427 aa15.57■□□□□ 0.08
CCDC170-202ENST00000537358 VPS8Q8N3P4 1428 aa15.57■□□□□ 0.08
CCDC170-202ENST00000537358 CLTCQ00610 1675 aaKnown RBP15.57■□□□□ 0.08
CCDC170-202ENST00000537358 GGT6Q6P531 493 aa15.56■□□□□ 0.08
CCDC170-202ENST00000537358 ZMYM3Q14202 1370 aa15.56■□□□□ 0.08
CCDC170-202ENST00000537358 STRCQ7RTU9 1775 aa15.56■□□□□ 0.08
CCDC170-202ENST00000537358 CCDC141Q6ZP82 1450 aa15.55■□□□□ 0.08
CCDC170-202ENST00000537358 MBD5Q9P267 1494 aa15.55■□□□□ 0.08
CCDC170-202ENST00000537358 CERKQ8TCT0 537 aa15.55■□□□□ 0.08
CCDC170-202ENST00000537358 CAMSAP2Q08AD1 1489 aa15.54■□□□□ 0.08
CCDC170-202ENST00000537358 LOC105371045A0A1W2PR82 267 aa15.54■□□□□ 0.08
CCDC170-202ENST00000537358 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.07
CCDC170-202ENST00000537358 DHX29Q7Z478 1369 aaKnown RBP15.51■□□□□ 0.07
CCDC170-202ENST00000537358 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
CCDC170-202ENST00000537358 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
CCDC170-202ENST00000537358 PTPRTO14522 1441 aa15.51■□□□□ 0.07
CCDC170-202ENST00000537358 ARHGEF5Q12774 1597 aa15.49■□□□□ 0.07
CCDC170-202ENST00000537358 MAP3K1Q13233 1512 aa15.49■□□□□ 0.07
CCDC170-202ENST00000537358 APLP2Q06481 763 aa15.49■□□□□ 0.07
CCDC170-202ENST00000537358 CAMSAP1Q5T5Y3 1602 aa15.48■□□□□ 0.07
CCDC170-202ENST00000537358 KIF3BO15066 747 aa15.48■□□□□ 0.07
CCDC170-202ENST00000537358 NCOA1Q15788 1441 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms