RNA–Protein interactions for RNA: ENST00000536996.5

SPPL3-204, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-204ENST00000536996 NCOA2Q15596 1464 aa22.64■■□□□ 1.21
SPPL3-204ENST00000536996 ARHGAP5Q13017 1502 aa22.63■■□□□ 1.21
SPPL3-204ENST00000536996 GPATCH8Q9UKJ3 1502 aaKnown RBP22.62■■□□□ 1.21
SPPL3-204ENST00000536996 RICTORQ6R327 1708 aa22.61■■□□□ 1.21
SPPL3-204ENST00000536996 KANK4Q5T7N3 995 aaPredicted RBP22.6■■□□□ 1.21
SPPL3-204ENST00000536996 CCNB3Q8WWL7 1395 aa22.59■■□□□ 1.21
SPPL3-204ENST00000536996 AKNAQ7Z591 1439 aa22.58■■□□□ 1.21
SPPL3-204ENST00000536996 EFCAB2Q5VUJ9 269 aa22.56■■□□□ 1.2
SPPL3-204ENST00000536996 SAMD9LQ8IVG5 1584 aa22.55■■□□□ 1.2
SPPL3-204ENST00000536996 COL17A1Q9UMD9 1497 aaPredicted RBP22.55■■□□□ 1.2
SPPL3-204ENST00000536996 ABCC1P33527 1531 aa22.54■■□□□ 1.2
SPPL3-204ENST00000536996 FRMPD1Q5SYB0 1578 aa22.54■■□□□ 1.2
SPPL3-204ENST00000536996 ADGRL1O94910 1474 aa22.54■■□□□ 1.2
SPPL3-204ENST00000536996 DENND4BO75064 1496 aaPredicted RBP22.49■■□□□ 1.19
SPPL3-204ENST00000536996 PLEKHH2Q8IVE3 1493 aa22.49■■□□□ 1.19
SPPL3-204ENST00000536996 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
SPPL3-204ENST00000536996 CFDP1Q9UEE9 299 aaPredicted RBP22.48■■□□□ 1.19
SPPL3-204ENST00000536996 ZMYM4Q5VZL5 1548 aa22.47■■□□□ 1.19
SPPL3-204ENST00000536996 SCAPERQ9BY12 1400 aa22.47■■□□□ 1.19
SPPL3-204ENST00000536996 MIA2Q96PC5 1412 aa22.46■■□□□ 1.19
SPPL3-204ENST00000536996 POGZQ7Z3K3 1410 aa22.45■■□□□ 1.18
SPPL3-204ENST00000536996 KDM5CP41229 1560 aa22.45■■□□□ 1.18
SPPL3-204ENST00000536996 ZNF518AQ6AHZ1 1483 aa22.44■■□□□ 1.18
SPPL3-204ENST00000536996 SYCP2Q9BX26 1530 aa22.44■■□□□ 1.18
SPPL3-204ENST00000536996 KIAA1107Q9UPP5 1409 aa22.44■■□□□ 1.18
SPPL3-204ENST00000536996 CAMSAP2Q08AD1 1489 aa22.43■■□□□ 1.18
SPPL3-204ENST00000536996 ARHGEF12Q9NZN5 1544 aa22.42■■□□□ 1.18
SPPL3-204ENST00000536996 PTPN23Q9H3S7 1636 aa22.42■■□□□ 1.18
SPPL3-204ENST00000536996 HECW2Q9P2P5 1572 aa22.4■■□□□ 1.18
SPPL3-204ENST00000536996 ARHGEF5Q12774 1597 aa22.39■■□□□ 1.18
SPPL3-204ENST00000536996 ZNF777Q9ULD5 760 aaPredicted RBP22.39■■□□□ 1.17
SPPL3-204ENST00000536996 RAPGEF3O95398 923 aa22.38■■□□□ 1.17
SPPL3-204ENST00000536996 MAGI2Q86UL8 1455 aa22.38■■□□□ 1.17
SPPL3-204ENST00000536996 FGD6Q6ZV73 1430 aa22.38■■□□□ 1.17
SPPL3-204ENST00000536996 ARHGEF40Q8TER5 1519 aa22.36■■□□□ 1.17
SPPL3-204ENST00000536996 KIDINS220Q9ULH0 1771 aa22.36■■□□□ 1.17
SPPL3-204ENST00000536996 TRAPPC8Q9Y2L5 1435 aa22.36■■□□□ 1.17
SPPL3-204ENST00000536996 CROCC2H7BZ55 1655 aa22.36■■□□□ 1.17
SPPL3-204ENST00000536996 TCOF1Q13428 1488 aaKnown RBP22.35■■□□□ 1.17
SPPL3-204ENST00000536996 MBD5Q9P267 1494 aa22.35■■□□□ 1.17
SPPL3-204ENST00000536996 INO80Q9ULG1 1556 aaPredicted RBP22.33■■□□□ 1.17
SPPL3-204ENST00000536996 ZNF644Q9H582 1327 aaPredicted RBP22.33■■□□□ 1.17
SPPL3-204ENST00000536996 ZFYVE16Q7Z3T8 1539 aa22.33■■□□□ 1.17
SPPL3-204ENST00000536996 MLH3Q9UHC1 1453 aa22.33■■□□□ 1.16
SPPL3-204ENST00000536996 CCDC141Q6ZP82 1450 aa22.31■■□□□ 1.16
SPPL3-204ENST00000536996 DNMT1P26358 1616 aaKnown RBP22.31■■□□□ 1.16
SPPL3-204ENST00000536996 HNRNPMP52272 730 aaKnown RBP eCLIP22.3■■□□□ 1.16
SPPL3-204ENST00000536996 ABCA6Q8N139 1617 aa22.29■■□□□ 1.16
SPPL3-204ENST00000536996 RSPH4AQ5TD94 716 aa22.29■■□□□ 1.16
SPPL3-204ENST00000536996 AFAP1Q8N556 730 aa22.29■■□□□ 1.16
SPPL3-204ENST00000536996 ADGBQ8N7X0 1667 aa22.29■■□□□ 1.16
SPPL3-204ENST00000536996 ATP7AQ04656 1500 aa22.28■■□□□ 1.16
SPPL3-204ENST00000536996 MAST1Q9Y2H9 1570 aa22.28■■□□□ 1.16
SPPL3-204ENST00000536996 PPARGC1BQ86YN6 1023 aaKnown RBP22.27■■□□□ 1.16
SPPL3-204ENST00000536996 DIP2CQ9Y2E4 1556 aa22.27■■□□□ 1.16
SPPL3-204ENST00000536996 REREQ9P2R6 1566 aa22.25■■□□□ 1.15
SPPL3-204ENST00000536996 YEATS2Q9ULM3 1422 aa22.24■■□□□ 1.15
SPPL3-204ENST00000536996 RTEL1-TNFRSF6BF6WH68 1400 aa22.23■■□□□ 1.15
SPPL3-204ENST00000536996 SIGLEC1Q9BZZ2 1709 aa22.23■■□□□ 1.15
SPPL3-204ENST00000536996 SPAG9O60271 1321 aaKnown RBP22.22■■□□□ 1.15
SPPL3-204ENST00000536996 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
SPPL3-204ENST00000536996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.21■■□□□ 1.157e-9■□□□□ 11
SPPL3-204ENST00000536996 ATP10AO60312 1499 aa22.21■■□□□ 1.15
SPPL3-204ENST00000536996 PLXNC1O60486 1568 aa22.21■■□□□ 1.15
SPPL3-204ENST00000536996 RRBP1Q9P2E9 1410 aaKnown RBP22.2■■□□□ 1.14
SPPL3-204ENST00000536996 DAPK1P53355 1430 aa22.19■■□□□ 1.14
SPPL3-204ENST00000536996 C9orf84Q5VXU9 1444 aa22.18■■□□□ 1.14
SPPL3-204ENST00000536996 ABCC5O15440 1437 aa22.17■■□□□ 1.14
SPPL3-204ENST00000536996 BCORL1Q5H9F3 1711 aa22.15■■□□□ 1.14
SPPL3-204ENST00000536996 TSPY4P0CV99 314 aa22.15■■□□□ 1.14
SPPL3-204ENST00000536996 TSPY10P0CW01 314 aa22.15■■□□□ 1.14
SPPL3-204ENST00000536996 MYT1LQ9UL68 1186 aa22.15■■□□□ 1.14
SPPL3-204ENST00000536996 AGLP35573 1532 aa22.13■■□□□ 1.13
SPPL3-204ENST00000536996 FAM50AQ14320 339 aaKnown RBP22.13■■□□□ 1.13
SPPL3-204ENST00000536996 A2MP01023 1474 aa22.1■■□□□ 1.13
SPPL3-204ENST00000536996 ADAMTSL3P82987 1691 aa22.09■■□□□ 1.13
SPPL3-204ENST00000536996 EIF2AK4Q9P2K8 1649 aaKnown RBP22.09■■□□□ 1.13
SPPL3-204ENST00000536996 ADGRL2O95490 1459 aa22.09■■□□□ 1.13
SPPL3-204ENST00000536996 FER1L4A9Z1Z3 1794 aa22.07■■□□□ 1.12
SPPL3-204ENST00000536996 DUOX2Q9NRD8 1548 aa22.06■■□□□ 1.12
SPPL3-204ENST00000536996 DHX29Q7Z478 1369 aaKnown RBP22.02■■□□□ 1.12
SPPL3-204ENST00000536996 ANKRD30AQ9BXX3 1397 aa22.02■■□□□ 1.12
SPPL3-204ENST00000536996 PTPRKQ15262 1439 aa22.02■■□□□ 1.12
SPPL3-204ENST00000536996 NCOA1Q15788 1441 aa22.02■■□□□ 1.12
SPPL3-204ENST00000536996 MADDQ8WXG6 1647 aa22.01■■□□□ 1.11
SPPL3-204ENST00000536996 RNF17Q9BXT8 1623 aaKnown RBP22.01■■□□□ 1.11
SPPL3-204ENST00000536996 ARID4BQ4LE39 1312 aaPredicted RBP22.01■■□□□ 1.11
SPPL3-204ENST00000536996 ROCK1Q13464 1354 aa21.99■■□□□ 1.11
SPPL3-204ENST00000536996 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
SPPL3-204ENST00000536996 GCC2Q8IWJ2 1684 aa21.99■■□□□ 1.11
SPPL3-204ENST00000536996 RIMS1Q86UR5 1692 aaKnown RBP21.98■■□□□ 1.11
SPPL3-204ENST00000536996 ERBINQ96RT1 1412 aa21.97■■□□□ 1.11
SPPL3-204ENST00000536996 DEPDC5O75140 1603 aa21.97■■□□□ 1.11
SPPL3-204ENST00000536996 MROH2AA6NES4 1674 aa21.96■■□□□ 1.11
SPPL3-204ENST00000536996 CHIC2Q9UKJ5 165 aa21.96■■□□□ 1.11
SPPL3-204ENST00000536996 FAM135AQ9P2D6 1515 aa21.95■■□□□ 1.1
SPPL3-204ENST00000536996 ZC3H13Q5T200 1668 aaKnown RBP21.94■■□□□ 1.1
SPPL3-204ENST00000536996 CLTCQ00610 1675 aaKnown RBP21.92■■□□□ 1.1
SPPL3-204ENST00000536996 MROH1Q8NDA8 1641 aa21.92■■□□□ 1.1
SPPL3-204ENST00000536996 KDM4FA0A1W2PPD8 638 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms