RNA–Protein interactions for RNA: ENST00000536917.1

LRTOMT-212, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-212ENST00000536917 SCAPERQ9BY12 1400 aa13.33□□□□□ -0.28
LRTOMT-212ENST00000536917 YEATS2Q9ULM3 1422 aa13.33□□□□□ -0.28
LRTOMT-212ENST00000536917 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
LRTOMT-212ENST00000536917 MADDQ8WXG6 1647 aa13.32□□□□□ -0.28
LRTOMT-212ENST00000536917 ZFYVE16Q7Z3T8 1539 aa13.32□□□□□ -0.28
LRTOMT-212ENST00000536917 CCDC18Q5T9S5 1454 aa13.31□□□□□ -0.28
LRTOMT-212ENST00000536917 CDC42BPBQ9Y5S2 1711 aa13.31□□□□□ -0.28
LRTOMT-212ENST00000536917 EFCAB2Q5VUJ9 269 aa13.31□□□□□ -0.28
LRTOMT-212ENST00000536917 FYCO1Q9BQS8 1478 aa13.3□□□□□ -0.28
LRTOMT-212ENST00000536917 CLIP1P30622 1438 aa13.3□□□□□ -0.28
LRTOMT-212ENST00000536917 KDM5CP41229 1560 aa13.28□□□□□ -0.28
LRTOMT-212ENST00000536917 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
LRTOMT-212ENST00000536917 ARID4BQ4LE39 1312 aaPredicted RBP13.27□□□□□ -0.29
LRTOMT-212ENST00000536917 ARHGAP5Q13017 1502 aa13.27□□□□□ -0.29
LRTOMT-212ENST00000536917 ATP10AO60312 1499 aa13.26□□□□□ -0.29
LRTOMT-212ENST00000536917 CDC42BPAQ5VT25 1732 aa13.26□□□□□ -0.29
LRTOMT-212ENST00000536917 ZNF518AQ6AHZ1 1483 aa13.26□□□□□ -0.29
LRTOMT-212ENST00000536917 RIMS1Q86UR5 1692 aaKnown RBP13.26□□□□□ -0.29
LRTOMT-212ENST00000536917 ARHGEF12Q9NZN5 1544 aa13.25□□□□□ -0.29
LRTOMT-212ENST00000536917 AFAP1Q8N556 730 aa13.24□□□□□ -0.29
LRTOMT-212ENST00000536917 ABCC1P33527 1531 aa13.23□□□□□ -0.29
LRTOMT-212ENST00000536917 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
LRTOMT-212ENST00000536917 LMTK3Q96Q04 1460 aa13.23□□□□□ -0.29
LRTOMT-212ENST00000536917 MLH3Q9UHC1 1453 aa13.23□□□□□ -0.29
LRTOMT-212ENST00000536917 REREQ9P2R6 1566 aa13.22□□□□□ -0.29
LRTOMT-212ENST00000536917 FER1L4A9Z1Z3 1794 aa13.22□□□□□ -0.29
LRTOMT-212ENST00000536917 ITSN2Q9NZM3 1697 aa13.21□□□□□ -0.29
LRTOMT-212ENST00000536917 DIP2CQ9Y2E4 1556 aa13.21□□□□□ -0.29
LRTOMT-212ENST00000536917 TRAPPC8Q9Y2L5 1435 aa13.21□□□□□ -0.3
LRTOMT-212ENST00000536917 GPATCH8Q9UKJ3 1502 aaKnown RBP13.2□□□□□ -0.3
LRTOMT-212ENST00000536917 ABCA6Q8N139 1617 aa13.2□□□□□ -0.3
LRTOMT-212ENST00000536917 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
LRTOMT-212ENST00000536917 SAMD9LQ8IVG5 1584 aa13.18□□□□□ -0.3
LRTOMT-212ENST00000536917 ILDR1Q86SU0 546 aaPredicted RBP13.17□□□□□ -0.3
LRTOMT-212ENST00000536917 AGLP35573 1532 aa13.17□□□□□ -0.3
LRTOMT-212ENST00000536917 CEP162Q5TB80 1403 aa13.16□□□□□ -0.3
LRTOMT-212ENST00000536917 MLECQ14165 292 aa13.16□□□□□ -0.3
LRTOMT-212ENST00000536917 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
LRTOMT-212ENST00000536917 KIAA1107Q9UPP5 1409 aa13.14□□□□□ -0.31
LRTOMT-212ENST00000536917 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
LRTOMT-212ENST00000536917 TIAM1Q13009 1591 aa13.11□□□□□ -0.31
LRTOMT-212ENST00000536917 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
LRTOMT-212ENST00000536917 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
LRTOMT-212ENST00000536917 INO80Q9ULG1 1556 aaPredicted RBP13.11□□□□□ -0.31
LRTOMT-212ENST00000536917 PLEKHH2Q8IVE3 1493 aa13.1□□□□□ -0.31
LRTOMT-212ENST00000536917 CCNB3Q8WWL7 1395 aa13.1□□□□□ -0.31
LRTOMT-212ENST00000536917 PREX1Q8TCU6 1659 aa13.1□□□□□ -0.31
LRTOMT-212ENST00000536917 CFDP1Q9UEE9 299 aaPredicted RBP13.1□□□□□ -0.31
LRTOMT-212ENST00000536917 CEBPAP49715 358 aaPredicted RBP13.09□□□□□ -0.31
LRTOMT-212ENST00000536917 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.31
LRTOMT-212ENST00000536917 HSPA2P54652 639 aa13.09□□□□□ -0.31
LRTOMT-212ENST00000536917 C3P01024 1663 aa13.08□□□□□ -0.31
LRTOMT-212ENST00000536917 PLXNC1O60486 1568 aa13.08□□□□□ -0.32
LRTOMT-212ENST00000536917 ZNF777Q9ULD5 760 aaPredicted RBP13.08□□□□□ -0.32
LRTOMT-212ENST00000536917 MBD5Q9P267 1494 aa13.08□□□□□ -0.32
LRTOMT-212ENST00000536917 ATP7AQ04656 1500 aa13.08□□□□□ -0.32
LRTOMT-212ENST00000536917 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
LRTOMT-212ENST00000536917 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
LRTOMT-212ENST00000536917 SPAG9O60271 1321 aaKnown RBP13.07□□□□□ -0.32
LRTOMT-212ENST00000536917 ZNF644Q9H582 1327 aaPredicted RBP13.06□□□□□ -0.32
LRTOMT-212ENST00000536917 LOC105371045A0A1W2PR82 267 aa13.05□□□□□ -0.32
LRTOMT-212ENST00000536917 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
LRTOMT-212ENST00000536917 STRCQ7RTU9 1775 aa13.04□□□□□ -0.32
LRTOMT-212ENST00000536917 MROH2AA6NES4 1674 aa13.04□□□□□ -0.32
LRTOMT-212ENST00000536917 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
LRTOMT-212ENST00000536917 NCOA2Q15596 1464 aa13.04□□□□□ -0.32
LRTOMT-212ENST00000536917 VPS8Q8N3P4 1428 aa13.03□□□□□ -0.32
LRTOMT-212ENST00000536917 A2MP01023 1474 aa13.03□□□□□ -0.32
LRTOMT-212ENST00000536917 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.32
LRTOMT-212ENST00000536917 RTEL1-TNFRSF6BF6WH68 1400 aa13.02□□□□□ -0.33
LRTOMT-212ENST00000536917 FBXO41Q8TF61 875 aa13.01□□□□□ -0.33
LRTOMT-212ENST00000536917 UHRF1BP1Q6BDS2 1440 aa13.01□□□□□ -0.33
LRTOMT-212ENST00000536917 MAP3K1Q13233 1512 aa13□□□□□ -0.33
LRTOMT-212ENST00000536917 LRRC9Q6ZRR7 1453 aa12.99□□□□□ -0.33
LRTOMT-212ENST00000536917 NPATQ14207 1427 aa12.99□□□□□ -0.33
LRTOMT-212ENST00000536917 CAMSAP2Q08AD1 1489 aa12.98□□□□□ -0.33
LRTOMT-212ENST00000536917 ZMYM3Q14202 1370 aa12.98□□□□□ -0.33
LRTOMT-212ENST00000536917 CLTCQ00610 1675 aaKnown RBP12.98□□□□□ -0.33
LRTOMT-212ENST00000536917 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
LRTOMT-212ENST00000536917 ESF1Q9H501 851 aaKnown RBP12.97□□□□□ -0.33
LRTOMT-212ENST00000536917 ARHGEF5Q12774 1597 aa12.97□□□□□ -0.33
LRTOMT-212ENST00000536917 DHX29Q7Z478 1369 aaKnown RBP12.96□□□□□ -0.33
LRTOMT-212ENST00000536917 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.33
LRTOMT-212ENST00000536917 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
LRTOMT-212ENST00000536917 KANK4Q5T7N3 995 aaPredicted RBP12.95□□□□□ -0.34
LRTOMT-212ENST00000536917 PTPRKQ15262 1439 aa12.95□□□□□ -0.34
LRTOMT-212ENST00000536917 PTPRTO14522 1441 aa12.94□□□□□ -0.34
LRTOMT-212ENST00000536917 DMRT2Q9Y5R5 561 aa12.93□□□□□ -0.34
LRTOMT-212ENST00000536917 NCOA1Q15788 1441 aa12.93□□□□□ -0.34
LRTOMT-212ENST00000536917 ZNF142P52746 1687 aaPredicted RBP12.93□□□□□ -0.34
LRTOMT-212ENST00000536917 GGT6Q6P531 493 aa12.92□□□□□ -0.34
LRTOMT-212ENST00000536917 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
LRTOMT-212ENST00000536917 MAST1Q9Y2H9 1570 aa12.92□□□□□ -0.34
LRTOMT-212ENST00000536917 MYO3AQ8NEV4 1616 aa12.91□□□□□ -0.34
LRTOMT-212ENST00000536917 MIA2Q96PC5 1412 aa12.91□□□□□ -0.34
LRTOMT-212ENST00000536917 FAM135AQ9P2D6 1515 aa12.91□□□□□ -0.34
LRTOMT-212ENST00000536917 MYOM3Q5VTT5 1437 aa12.89□□□□□ -0.35
LRTOMT-212ENST00000536917 CAMSAP1Q5T5Y3 1602 aa12.89□□□□□ -0.35
LRTOMT-212ENST00000536917 CEP170BQ9Y4F5 1589 aaPredicted RBP12.89□□□□□ -0.35
LRTOMT-212ENST00000536917 LTBP4Q8N2S1 1624 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms