RNA–Protein interactions for RNA: ENST00000536613.6

CACNB1-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-205ENST00000536613 ARHGAP5Q13017 1502 aa29.61■■■□□ 2.33
CACNB1-205ENST00000536613 MAGI2Q86UL8 1455 aa29.6■■■□□ 2.33
CACNB1-205ENST00000536613 CEP162Q5TB80 1403 aa29.59■■■□□ 2.33
CACNB1-205ENST00000536613 ZFYVE16Q7Z3T8 1539 aa29.58■■■□□ 2.33
CACNB1-205ENST00000536613 ARID4BQ4LE39 1312 aaPredicted RBP29.57■■■□□ 2.32
CACNB1-205ENST00000536613 YEATS2Q9ULM3 1422 aa29.56■■■□□ 2.32
CACNB1-205ENST00000536613 ADAMTSL3P82987 1691 aa29.53■■■□□ 2.32
CACNB1-205ENST00000536613 PREX2Q70Z35 1606 aa29.52■■■□□ 2.32
CACNB1-205ENST00000536613 BCORL1Q5H9F3 1711 aa29.51■■■□□ 2.31
CACNB1-205ENST00000536613 CDC42BPBQ9Y5S2 1711 aa29.5■■■□□ 2.31
CACNB1-205ENST00000536613 ZNF518AQ6AHZ1 1483 aa29.49■■■□□ 2.31
CACNB1-205ENST00000536613 PTPRMP28827 1452 aa29.46■■■□□ 2.31
CACNB1-205ENST00000536613 AFAP1Q8N556 730 aa29.45■■■□□ 2.31
CACNB1-205ENST00000536613 KDM5CP41229 1560 aa29.44■■■□□ 2.3
CACNB1-205ENST00000536613 LOC105371045A0A1W2PR82 267 aa29.43■■■□□ 2.3
CACNB1-205ENST00000536613 ABCC1P33527 1531 aa29.43■■■□□ 2.3
CACNB1-205ENST00000536613 CDC42BPAQ5VT25 1732 aa29.42■■■□□ 2.3
CACNB1-205ENST00000536613 MADDQ8WXG6 1647 aa29.42■■■□□ 2.3
CACNB1-205ENST00000536613 HECW2Q9P2P5 1572 aa29.42■■■□□ 2.3
CACNB1-205ENST00000536613 ATP10AO60312 1499 aa29.42■■■□□ 2.3
CACNB1-205ENST00000536613 MTUS2Q5JR59 1369 aa29.41■■■□□ 2.3
CACNB1-205ENST00000536613 GPATCH8Q9UKJ3 1502 aaKnown RBP29.41■■■□□ 2.3
CACNB1-205ENST00000536613 SIGLEC1Q9BZZ2 1709 aa29.41■■■□□ 2.3
CACNB1-205ENST00000536613 ARHGEF12Q9NZN5 1544 aa29.4■■■□□ 2.3
CACNB1-205ENST00000536613 C9orf84Q5VXU9 1444 aa29.39■■■□□ 2.3
CACNB1-205ENST00000536613 TRAPPC8Q9Y2L5 1435 aa29.37■■■□□ 2.29
CACNB1-205ENST00000536613 MLH3Q9UHC1 1453 aa29.35■■■□□ 2.29
CACNB1-205ENST00000536613 ITSN2Q9NZM3 1697 aa29.34■■■□□ 2.29
CACNB1-205ENST00000536613 CCNB3Q8WWL7 1395 aa29.34■■■□□ 2.29
CACNB1-205ENST00000536613 MYT1LQ9UL68 1186 aa29.33■■■□□ 2.29
CACNB1-205ENST00000536613 ZNF777Q9ULD5 760 aaPredicted RBP29.33■■■□□ 2.29
CACNB1-205ENST00000536613 EHBP1L1Q8N3D4 1523 aa29.33■■■□□ 2.29
CACNB1-205ENST00000536613 SAMD9LQ8IVG5 1584 aa29.31■■■□□ 2.28
CACNB1-205ENST00000536613 MLECQ14165 292 aa29.31■■■□□ 2.28
CACNB1-205ENST00000536613 CFDP1Q9UEE9 299 aaPredicted RBP29.31■■■□□ 2.28
CACNB1-205ENST00000536613 RIMS1Q86UR5 1692 aaKnown RBP29.31■■■□□ 2.28
CACNB1-205ENST00000536613 DIP2CQ9Y2E4 1556 aa29.3■■■□□ 2.28
CACNB1-205ENST00000536613 SYCP2Q9BX26 1530 aa29.27■■■□□ 2.28
CACNB1-205ENST00000536613 VPS8Q8N3P4 1428 aa29.27■■■□□ 2.28
CACNB1-205ENST00000536613 REREQ9P2R6 1566 aa29.26■■■□□ 2.27
CACNB1-205ENST00000536613 PLEKHH2Q8IVE3 1493 aa29.25■■■□□ 2.27
CACNB1-205ENST00000536613 ABCA6Q8N139 1617 aa29.25■■■□□ 2.27
CACNB1-205ENST00000536613 KIAA1107Q9UPP5 1409 aa29.25■■■□□ 2.27
CACNB1-205ENST00000536613 TIAM1Q13009 1591 aa29.24■■■□□ 2.27
CACNB1-205ENST00000536613 HNRNPMP52272 730 aaKnown RBP eCLIP29.22■■■□□ 2.27
CACNB1-205ENST00000536613 FER1L4A9Z1Z3 1794 aa29.2■■■□□ 2.26
CACNB1-205ENST00000536613 KIDINS220Q9ULH0 1771 aa29.2■■■□□ 2.26
CACNB1-205ENST00000536613 SPAG9O60271 1321 aaKnown RBP29.18■■■□□ 2.26
CACNB1-205ENST00000536613 AGLP35573 1532 aa29.16■■■□□ 2.26
CACNB1-205ENST00000536613 PLPPR3Q6T4P5 718 aa29.16■■■□□ 2.26
CACNB1-205ENST00000536613 NCOA2Q15596 1464 aa29.16■■■□□ 2.26
CACNB1-205ENST00000536613 LMTK3Q96Q04 1460 aa29.14■■■□□ 2.26
CACNB1-205ENST00000536613 ZNF644Q9H582 1327 aaPredicted RBP29.14■■■□□ 2.25
CACNB1-205ENST00000536613 SUPT6HQ7KZ85 1726 aaKnown RBP29.13■■■□□ 2.25
CACNB1-205ENST00000536613 ATP7AQ04656 1500 aa29.11■■■□□ 2.25
CACNB1-205ENST00000536613 LRRC9Q6ZRR7 1453 aa29.1■■■□□ 2.25
CACNB1-205ENST00000536613 INO80Q9ULG1 1556 aaPredicted RBP29.09■■■□□ 2.25
CACNB1-205ENST00000536613 MBD5Q9P267 1494 aa29.09■■■□□ 2.25
CACNB1-205ENST00000536613 MAP3K1Q13233 1512 aa29.08■■■□□ 2.25
CACNB1-205ENST00000536613 CEBPAP49715 358 aaPredicted RBP29.03■■■□□ 2.24
CACNB1-205ENST00000536613 CAMSAP2Q08AD1 1489 aa29.02■■■□□ 2.24
CACNB1-205ENST00000536613 KANK4Q5T7N3 995 aaPredicted RBP29.01■■■□□ 2.23
CACNB1-205ENST00000536613 A2MP01023 1474 aa29.01■■■□□ 2.23
CACNB1-205ENST00000536613 ESF1Q9H501 851 aaKnown RBP29■■■□□ 2.23
CACNB1-205ENST00000536613 PLXNC1O60486 1568 aa29■■■□□ 2.23
CACNB1-205ENST00000536613 RTEL1-TNFRSF6BF6WH68 1400 aa28.98■■■□□ 2.23
CACNB1-205ENST00000536613 CCDC141Q6ZP82 1450 aa28.97■■■□□ 2.23
CACNB1-205ENST00000536613 HSPA2P54652 639 aa28.97■■■□□ 2.23
CACNB1-205ENST00000536613 CNTLNQ9NXG0 1405 aa28.96■■■□□ 2.23
CACNB1-205ENST00000536613 RSPH4AQ5TD94 716 aa28.94■■■□□ 2.22
CACNB1-205ENST00000536613 ADGBQ8N7X0 1667 aa28.92■■■□□ 2.22
CACNB1-205ENST00000536613 PREX1Q8TCU6 1659 aa28.91■■■□□ 2.22
CACNB1-205ENST00000536613 C3P01024 1663 aa28.9■■■□□ 2.22
CACNB1-205ENST00000536613 ARHGEF5Q12774 1597 aa28.89■■■□□ 2.22
CACNB1-205ENST00000536613 APLP2Q06481 763 aa28.89■■■□□ 2.22
CACNB1-205ENST00000536613 MYOM3Q5VTT5 1437 aa28.87■■■□□ 2.21
CACNB1-205ENST00000536613 UHRF1BP1Q6BDS2 1440 aa28.86■■■□□ 2.21
CACNB1-205ENST00000536613 MIA2Q96PC5 1412 aa28.86■■■□□ 2.21
CACNB1-205ENST00000536613 DHX29Q7Z478 1369 aaKnown RBP28.86■■■□□ 2.21
CACNB1-205ENST00000536613 GGT6Q6P531 493 aa28.84■■■□□ 2.21
CACNB1-205ENST00000536613 MROH2AA6NES4 1674 aa28.83■■■□□ 2.21
CACNB1-205ENST00000536613 ZMYM3Q14202 1370 aa28.83■■■□□ 2.21
CACNB1-205ENST00000536613 TSPY4P0CV99 314 aa28.82■■■□□ 2.2
CACNB1-205ENST00000536613 TSPY10P0CW01 314 aa28.82■■■□□ 2.2
CACNB1-205ENST00000536613 PPP6R1Q9UPN7 881 aa28.81■■■□□ 2.2
CACNB1-205ENST00000536613 NPATQ14207 1427 aa28.79■■■□□ 2.2
CACNB1-205ENST00000536613 SETD1BQ9UPS6 1966 aaKnown RBP28.79■■■□□ 2.2
CACNB1-205ENST00000536613 ILDR1Q86SU0 546 aaPredicted RBP28.79■■■□□ 2.2
CACNB1-205ENST00000536613 CLTCQ00610 1675 aaKnown RBP28.77■■■□□ 2.2
CACNB1-205ENST00000536613 MAST1Q9Y2H9 1570 aa28.75■■■□□ 2.19
CACNB1-205ENST00000536613 KIF3BO15066 747 aa28.74■■■□□ 2.19
CACNB1-205ENST00000536613 PTPRKQ15262 1439 aa28.69■■■□□ 2.18
CACNB1-205ENST00000536613 FAM135AQ9P2D6 1515 aa28.67■■■□□ 2.18
CACNB1-205ENST00000536613 FGD6Q6ZV73 1430 aa28.67■■■□□ 2.18
CACNB1-205ENST00000536613 PTPN23Q9H3S7 1636 aa28.66■■■□□ 2.18
CACNB1-205ENST00000536613 KDM5DQ9BY66 1539 aa28.64■■■□□ 2.18
CACNB1-205ENST00000536613 DMRT2Q9Y5R5 561 aa28.64■■■□□ 2.18
CACNB1-205ENST00000536613 STRCQ7RTU9 1775 aa28.63■■■□□ 2.17
CACNB1-205ENST00000536613 ABCC5O15440 1437 aa28.62■■■□□ 2.17
CACNB1-205ENST00000536613 TCOF1Q13428 1488 aaKnown RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms