RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 PTPRGP23470 1445 aa12.16□□□□□ -0.46
COL21A1-212ENST00000535941 ROCK1Q13464 1354 aa12.15□□□□□ -0.47
COL21A1-212ENST00000535941 NAIPQ13075 1403 aa12.14□□□□□ -0.47
COL21A1-212ENST00000535941 SETD5Q9C0A6 1442 aa12.14□□□□□ -0.47
COL21A1-212ENST00000535941 PLXNC1O60486 1568 aa12.14□□□□□ -0.47
COL21A1-212ENST00000535941 DENND4BO75064 1496 aaPredicted RBP12.14□□□□□ -0.47
COL21A1-212ENST00000535941 DAPK1P53355 1430 aa12.13□□□□□ -0.47
COL21A1-212ENST00000535941 KDM5DQ9BY66 1539 aa12.12□□□□□ -0.47
COL21A1-212ENST00000535941 ABCC5O15440 1437 aa12.11□□□□□ -0.47
COL21A1-212ENST00000535941 RAB3GAP2Q9H2M9 1393 aa12.11□□□□□ -0.47
COL21A1-212ENST00000535941 MBD5Q9P267 1494 aa12.11□□□□□ -0.47
COL21A1-212ENST00000535941 TTBK1Q5TCY1 1321 aaPredicted RBP12.09□□□□□ -0.47
COL21A1-212ENST00000535941 ABCC1P33527 1531 aa12.08□□□□□ -0.47
COL21A1-212ENST00000535941 UNC13BO14795 1591 aa12.07□□□□□ -0.48
COL21A1-212ENST00000535941 FBLN2P98095 1184 aa12.07□□□□□ -0.48
COL21A1-212ENST00000535941 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
COL21A1-212ENST00000535941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.05□□□□□ -0.48
COL21A1-212ENST00000535941 INO80Q9ULG1 1556 aaPredicted RBP12.05□□□□□ -0.48
COL21A1-212ENST00000535941 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
COL21A1-212ENST00000535941 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
COL21A1-212ENST00000535941 DEPDC5O75140 1603 aa12.04□□□□□ -0.48
COL21A1-212ENST00000535941 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
COL21A1-212ENST00000535941 MAP3K4Q9Y6R4 1608 aa12.04□□□□□ -0.48
COL21A1-212ENST00000535941 WDR7Q9Y4E6 1490 aa12.04□□□□□ -0.48
COL21A1-212ENST00000535941 CFAP74Q9C0B2 1584 aa12.03□□□□□ -0.48
COL21A1-212ENST00000535941 MAGI2Q86UL8 1455 aa12.03□□□□□ -0.48
COL21A1-212ENST00000535941 KIAA1107Q9UPP5 1409 aa12.03□□□□□ -0.48
COL21A1-212ENST00000535941 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
COL21A1-212ENST00000535941 GLI2P10070 1586 aa12.01□□□□□ -0.49
COL21A1-212ENST00000535941 CDK11AQ9UQ88 783 aaPredicted RBP12.01□□□□□ -0.49
COL21A1-212ENST00000535941 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
COL21A1-212ENST00000535941 SYCP2Q9BX26 1530 aa12.01□□□□□ -0.49
COL21A1-212ENST00000535941 PLCH2O75038 1416 aa12□□□□□ -0.49
COL21A1-212ENST00000535941 NCOA1Q15788 1441 aa12□□□□□ -0.49
COL21A1-212ENST00000535941 PLEKHH2Q8IVE3 1493 aa11.99□□□□□ -0.49
COL21A1-212ENST00000535941 IQGAP3Q86VI3 1631 aa11.99□□□□□ -0.49
COL21A1-212ENST00000535941 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
COL21A1-212ENST00000535941 EIF2AK4Q9P2K8 1649 aaKnown RBP11.99□□□□□ -0.49
COL21A1-212ENST00000535941 PPRC1Q5VV67 1664 aaKnown RBP11.99□□□□□ -0.49
COL21A1-212ENST00000535941 ZFYVE16Q7Z3T8 1539 aa11.98□□□□□ -0.49
COL21A1-212ENST00000535941 PZPP20742 1482 aa11.97□□□□□ -0.49
COL21A1-212ENST00000535941 KDM5CP41229 1560 aa11.97□□□□□ -0.49
COL21A1-212ENST00000535941 ACIN1Q9UKV3 1341 aaKnown RBP11.95□□□□□ -0.5
COL21A1-212ENST00000535941 ARHGAP5Q13017 1502 aa11.95□□□□□ -0.5
COL21A1-212ENST00000535941 VWDEQ8N2E2 1590 aa11.95□□□□□ -0.5
COL21A1-212ENST00000535941 CCER1Q8TC90 406 aaPredicted RBP11.94□□□□□ -0.5
COL21A1-212ENST00000535941 ATP1B4Q9UN42 357 aaPredicted RBP11.94□□□□□ -0.5
COL21A1-212ENST00000535941 RICTORQ6R327 1708 aa11.94□□□□□ -0.5
COL21A1-212ENST00000535941 C9orf84Q5VXU9 1444 aa11.94□□□□□ -0.5
COL21A1-212ENST00000535941 KIDINS220Q9ULH0 1771 aa11.94□□□□□ -0.5
COL21A1-212ENST00000535941 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
COL21A1-212ENST00000535941 ASXL2Q76L83 1435 aa11.93□□□□□ -0.5
COL21A1-212ENST00000535941 MROH1Q8NDA8 1641 aa11.92□□□□□ -0.5
COL21A1-212ENST00000535941 ZNF644Q9H582 1327 aaPredicted RBP11.92□□□□□ -0.5
COL21A1-212ENST00000535941 POLR1AO95602 1720 aaPredicted RBP11.92□□□□□ -0.5
COL21A1-212ENST00000535941 PLEKHD1A6NEE1 506 aa11.92□□□□□ -0.5
COL21A1-212ENST00000535941 RNF17Q9BXT8 1623 aaKnown RBP11.92□□□□□ -0.5
COL21A1-212ENST00000535941 KIF13AQ9H1H9 1805 aa11.92□□□□□ -0.5
COL21A1-212ENST00000535941 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
COL21A1-212ENST00000535941 RTEL1-TNFRSF6BF6WH68 1400 aa11.91□□□□□ -0.5
COL21A1-212ENST00000535941 DUOX2Q9NRD8 1548 aa11.91□□□□□ -0.5
COL21A1-212ENST00000535941 DIP2BQ9P265 1576 aa11.9□□□□□ -0.5
COL21A1-212ENST00000535941 FRMPD1Q5SYB0 1578 aa11.89□□□□□ -0.51
COL21A1-212ENST00000535941 ERBINQ96RT1 1412 aa11.88□□□□□ -0.51
COL21A1-212ENST00000535941 TEX14Q8IWB6 1497 aa11.88□□□□□ -0.51
COL21A1-212ENST00000535941 NEURL4Q96JN8 1562 aa11.87□□□□□ -0.51
COL21A1-212ENST00000535941 PRDM15P57071 1507 aaPredicted RBP11.87□□□□□ -0.51
COL21A1-212ENST00000535941 ATP7AQ04656 1500 aa11.86□□□□□ -0.51
COL21A1-212ENST00000535941 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
COL21A1-212ENST00000535941 CFDP1Q9UEE9 299 aaPredicted RBP11.86□□□□□ -0.51
COL21A1-212ENST00000535941 RPRD2Q5VT52 1461 aaKnown RBP11.85□□□□□ -0.51
COL21A1-212ENST00000535941 RSPH4AQ5TD94 716 aa11.85□□□□□ -0.51
COL21A1-212ENST00000535941 ANKRD30AQ9BXX3 1397 aa11.85□□□□□ -0.51
COL21A1-212ENST00000535941 E9PCH4 1651 aa11.85□□□□□ -0.51
COL21A1-212ENST00000535941 CEP152O94986 1710 aa11.85□□□□□ -0.51
COL21A1-212ENST00000535941 TET3O43151 1660 aa11.85□□□□□ -0.51
COL21A1-212ENST00000535941 ZMYM4Q5VZL5 1548 aa11.85□□□□□ -0.51
COL21A1-212ENST00000535941 ATP10AO60312 1499 aa11.85□□□□□ -0.51
COL21A1-212ENST00000535941 FAM135AQ9P2D6 1515 aa11.84□□□□□ -0.51
COL21A1-212ENST00000535941 HECW2Q9P2P5 1572 aa11.84□□□□□ -0.51
COL21A1-212ENST00000535941 ARID3CA6NKF2 412 aa11.84□□□□□ -0.51
COL21A1-212ENST00000535941 FANCAO15360 1455 aa11.84□□□□□ -0.51
COL21A1-212ENST00000535941 ANKRD50Q9ULJ7 1429 aa11.84□□□□□ -0.51
COL21A1-212ENST00000535941 ANKRD30BQ9BXX2 1392 aa11.84□□□□□ -0.51
COL21A1-212ENST00000535941 SCAF1Q9H7N4 1312 aaKnown RBP11.84□□□□□ -0.51
COL21A1-212ENST00000535941 ABCA6Q8N139 1617 aa11.84□□□□□ -0.51
COL21A1-212ENST00000535941 NEO1Q92859 1461 aa11.83□□□□□ -0.51
COL21A1-212ENST00000535941 TRAPPC8Q9Y2L5 1435 aa11.83□□□□□ -0.52
COL21A1-212ENST00000535941 SPHKAPQ2M3C7 1700 aa11.83□□□□□ -0.52
COL21A1-212ENST00000535941 REREQ9P2R6 1566 aa11.82□□□□□ -0.52
COL21A1-212ENST00000535941 IFT172Q9UG01 1749 aa11.82□□□□□ -0.52
COL21A1-212ENST00000535941 LMTK2Q8IWU2 1503 aa11.82□□□□□ -0.52
COL21A1-212ENST00000535941 LAMC1P11047 1609 aa11.8□□□□□ -0.52
COL21A1-212ENST00000535941 ZC3H13Q5T200 1668 aaKnown RBP11.8□□□□□ -0.52
COL21A1-212ENST00000535941 MLH3Q9UHC1 1453 aa11.8□□□□□ -0.52
COL21A1-212ENST00000535941 KIF15Q9NS87 1388 aa11.79□□□□□ -0.52
COL21A1-212ENST00000535941 POGZQ7Z3K3 1410 aa11.79□□□□□ -0.52
COL21A1-212ENST00000535941 ITGAEP38570 1179 aa11.79□□□□□ -0.52
COL21A1-212ENST00000535941 DIP2CQ9Y2E4 1556 aa11.78□□□□□ -0.52
COL21A1-212ENST00000535941 ZNF518AQ6AHZ1 1483 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms