RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 PTGER2P43116 358 aa9.39□□□□□ -0.91
SPARCL1-208ENST00000535835 PKD2Q13563 968 aa9.39□□□□□ -0.91
SPARCL1-208ENST00000535835 TMEM92Q6UXU6 159 aa9.39□□□□□ -0.91
SPARCL1-208ENST00000535835 MICALL2Q8IY33 904 aa9.38□□□□□ -0.91
SPARCL1-208ENST00000535835 ZNF687Q8N1G0 1237 aa9.38□□□□□ -0.91
SPARCL1-208ENST00000535835 FBXO22Q8NEZ5 403 aa9.36□□□□□ -0.91
SPARCL1-208ENST00000535835 BCL11BQ9C0K0 894 aaPredicted RBP9.35□□□□□ -0.91
SPARCL1-208ENST00000535835 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
SPARCL1-208ENST00000535835 RGL2O15211 777 aa9.33□□□□□ -0.92
SPARCL1-208ENST00000535835 ECM2O94769 699 aaPredicted RBP9.33□□□□□ -0.92
SPARCL1-208ENST00000535835 MFRPQ9BY79 579 aa9.31□□□□□ -0.92
SPARCL1-208ENST00000535835 ANKRD13DQ6ZTN6 518 aa9.3□□□□□ -0.92
SPARCL1-208ENST00000535835 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
SPARCL1-208ENST00000535835 NLRP6P59044 892 aa9.28□□□□□ -0.92
SPARCL1-208ENST00000535835 STK25O00506 426 aa9.27□□□□□ -0.93
SPARCL1-208ENST00000535835 GPR153Q6NV75 609 aa9.26□□□□□ -0.93
SPARCL1-208ENST00000535835 TAOK2Q9UL54 1235 aa9.26□□□□□ -0.93
SPARCL1-208ENST00000535835 KIF3CO14782 793 aa9.2□□□□□ -0.94
SPARCL1-208ENST00000535835 ARSIQ5FYB1 569 aa9.2□□□□□ -0.94
SPARCL1-208ENST00000535835 PLA2G2EQ9NZK7 142 aa9.2□□□□□ -0.94
SPARCL1-208ENST00000535835 LSM11P83369 360 aaKnown RBP eCLIP9.19□□□□□ -0.94
SPARCL1-208ENST00000535835 ZNF316A6NFI3 1004 aaPredicted RBP9.17□□□□□ -0.94
SPARCL1-208ENST00000535835 PPP1R37O75864 691 aa9.17□□□□□ -0.94
SPARCL1-208ENST00000535835 HCSTQ9UBK5 93 aa9.15□□□□□ -0.94
SPARCL1-208ENST00000535835 C2orf72A6NCS6 295 aa9.14□□□□□ -0.95
SPARCL1-208ENST00000535835 KHSRPQ92945 711 aaKnown RBP eCLIP9.13□□□□□ -0.95
SPARCL1-208ENST00000535835 HS6ST3Q8IZP7 471 aa9.12□□□□□ -0.95
SPARCL1-208ENST00000535835 PBX2P40425 430 aa9.11□□□□□ -0.95
SPARCL1-208ENST00000535835 NKX1-1Q15270 411 aaPredicted RBP9.06□□□□□ -0.96
SPARCL1-208ENST00000535835 SLC34A2O95436 690 aa9.05□□□□□ -0.96
SPARCL1-208ENST00000535835 DNAJC5Q9H3Z4 198 aa9.05□□□□□ -0.96
SPARCL1-208ENST00000535835 AXIN2Q9Y2T1 843 aa9.04□□□□□ -0.96
SPARCL1-208ENST00000535835 NUDT7P0C024 238 aa9.02□□□□□ -0.97
SPARCL1-208ENST00000535835 CHGAP10645 457 aaKnown RBP9.02□□□□□ -0.97
SPARCL1-208ENST00000535835 TMC2Q8TDI7 906 aa9.02□□□□□ -0.97
SPARCL1-208ENST00000535835 PCDHGA4Q9Y5G9 962 aa9.02□□□□□ -0.97
SPARCL1-208ENST00000535835 POTEEQ6S8J3 1075 aa9.01□□□□□ -0.97
SPARCL1-208ENST00000535835 KDM4FA0A1W2PPD8 638 aa9□□□□□ -0.97
SPARCL1-208ENST00000535835 LHX6Q9UPM6 363 aa9□□□□□ -0.97
SPARCL1-208ENST00000535835 ADGRD1Q6QNK2 874 aa8.99□□□□□ -0.97
SPARCL1-208ENST00000535835 ARHGAP33O14559 1287 aa8.96□□□□□ -0.98
SPARCL1-208ENST00000535835 FOXK1P85037 733 aa8.96□□□□□ -0.98
SPARCL1-208ENST00000535835 GPHNQ9NQX3 736 aaPredicted RBP8.96□□□□□ -0.98
SPARCL1-208ENST00000535835 DSG2Q14126 1118 aa8.95□□□□□ -0.98
SPARCL1-208ENST00000535835 PTCD2Q8WV60 388 aaKnown RBP8.95□□□□□ -0.98
SPARCL1-208ENST00000535835 PLPP6Q8IY26 295 aa8.94□□□□□ -0.98
SPARCL1-208ENST00000535835 STAC3Q96MF2 364 aa8.93□□□□□ -0.98
SPARCL1-208ENST00000535835 PSDA5PKW4 1024 aaPredicted RBP8.92□□□□□ -0.98
SPARCL1-208ENST00000535835 TK2O00142 265 aa8.91□□□□□ -0.98
SPARCL1-208ENST00000535835 RGS20O76081 388 aa8.91□□□□□ -0.98
SPARCL1-208ENST00000535835 KCTD12Q96CX2 325 aaKnown RBP8.9□□□□□ -0.98
SPARCL1-208ENST00000535835 IRX2Q9BZI1 471 aaPredicted RBP8.9□□□□□ -0.98
SPARCL1-208ENST00000535835 CRISPLD2Q9H0B8 497 aa8.9□□□□□ -0.98
SPARCL1-208ENST00000535835 GTPBP6O43824 516 aaPredicted RBP8.89□□□□□ -0.99
SPARCL1-208ENST00000535835 NCKAP5LQ9HCH0 1330 aa8.87□□□□□ -0.99
SPARCL1-208ENST00000535835 HRO43593 1189 aa8.87□□□□□ -0.99
SPARCL1-208ENST00000535835 OXER1Q8TDS5 423 aa8.85□□□□□ -0.99
SPARCL1-208ENST00000535835 DMRTA1Q5VZB9 504 aa8.84□□□□□ -0.99
SPARCL1-208ENST00000535835 PSEN2P49810 448 aa8.83□□□□□ -1
SPARCL1-208ENST00000535835 RYDENQ9NUL5 291 aaKnown RBP8.83□□□□□ -1
SPARCL1-208ENST00000535835 PTPN5P54829 565 aa8.82□□□□□ -1
SPARCL1-208ENST00000535835 PPP1R15BQ5SWA1 713 aa8.81□□□□□ -1
SPARCL1-208ENST00000535835 IFFO2Q5TF58 517 aa8.8□□□□□ -1
SPARCL1-208ENST00000535835 KCNH8Q96L42 1107 aa8.79□□□□□ -1
SPARCL1-208ENST00000535835 TBC1D12O60347 775 aa8.78□□□□□ -1
SPARCL1-208ENST00000535835 PPP4R3BQ5MIZ7 849 aa8.78□□□□□ -1
SPARCL1-208ENST00000535835 UPF1Q92900 1129 aaKnown RBP eCLIP8.78□□□□□ -1
SPARCL1-208ENST00000535835 PDE4AP27815 886 aa8.76□□□□□ -1.01
SPARCL1-208ENST00000535835 MFSD10Q14728 455 aa8.76□□□□□ -1.01
SPARCL1-208ENST00000535835 CADPS2Q86UW7 1296 aa8.76□□□□□ -1.01
SPARCL1-208ENST00000535835 A0A0G2JS52 829 aa8.74□□□□□ -1.01
SPARCL1-208ENST00000535835 LARP6Q9BRS8 491 aaKnown RBP8.74□□□□□ -1.01
SPARCL1-208ENST00000535835 ANO8Q9HCE9 1232 aaPredicted RBP8.74□□□□□ -1.01
SPARCL1-208ENST00000535835 KCNK17Q96T54 332 aa8.73□□□□□ -1.01
SPARCL1-208ENST00000535835 FOSBP53539 338 aa8.72□□□□□ -1.01
SPARCL1-208ENST00000535835 EMILIN3Q9NT22 766 aa8.72□□□□□ -1.01
SPARCL1-208ENST00000535835 DCAF8L2P0C7V8 631 aa8.71□□□□□ -1.02
SPARCL1-208ENST00000535835 DDX27Q96GQ7 796 aaKnown RBP8.71□□□□□ -1.02
SPARCL1-208ENST00000535835 VPS9D1Q9Y2B5 631 aa8.71□□□□□ -1.02
SPARCL1-208ENST00000535835 GOLGA8CPA6NN73 597 aa8.7□□□□□ -1.02
SPARCL1-208ENST00000535835 ZNF454Q8N9F8 522 aa8.7□□□□□ -1.02
SPARCL1-208ENST00000535835 BCL2L12Q9HB09 334 aa8.7□□□□□ -1.02
SPARCL1-208ENST00000535835 Q6ZNB5 142 aa8.69□□□□□ -1.02
SPARCL1-208ENST00000535835 EVI5O60447 810 aa8.68□□□□□ -1.02
SPARCL1-208ENST00000535835 THSD4Q6ZMP0 1018 aa8.68□□□□□ -1.02
SPARCL1-208ENST00000535835 JPH4Q96JJ6 628 aa8.67□□□□□ -1.02
SPARCL1-208ENST00000535835 SLC4A5Q9BY07 1137 aa8.67□□□□□ -1.02
SPARCL1-208ENST00000535835 WNT2BQ93097 391 aa8.65□□□□□ -1.02
SPARCL1-208ENST00000535835 ADAM33Q9BZ11 813 aa8.65□□□□□ -1.02
SPARCL1-208ENST00000535835 BHMG1C9JSJ3 638 aaPredicted RBP8.64□□□□□ -1.03
SPARCL1-208ENST00000535835 CAMK2BQ13554 666 aa8.63□□□□□ -1.03
SPARCL1-208ENST00000535835 ZBED2Q9BTP6 218 aa8.63□□□□□ -1.03
SPARCL1-208ENST00000535835 MAP3K9P80192 1104 aa8.62□□□□□ -1.03
SPARCL1-208ENST00000535835 MRPL50Q8N5N7 158 aaKnown RBP8.62□□□□□ -1.03
SPARCL1-208ENST00000535835 ZDHHC16Q969W1 377 aa8.61□□□□□ -1.03
SPARCL1-208ENST00000535835 PCDHGA10Q9Y5H3 936 aa8.61□□□□□ -1.03
SPARCL1-208ENST00000535835 PTPREP23469 700 aa8.6□□□□□ -1.03
SPARCL1-208ENST00000535835 BBXQ8WY36 941 aaPredicted RBP8.6□□□□□ -1.03
SPARCL1-208ENST00000535835 COL9A1P20849 921 aa8.57□□□□□ -1.04
SPARCL1-208ENST00000535835 NBPF3Q9H094 633 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms