RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 TROQ12816 1431 aaPredicted RBP14.34□□□□□ -0.11
CHD4-204ENST00000535810 FANCAO15360 1455 aa14.34□□□□□ -0.11
CHD4-204ENST00000535810 CCDC18Q5T9S5 1454 aa14.34□□□□□ -0.11
CHD4-204ENST00000535810 CDK11AQ9UQ88 783 aaPredicted RBP14.34□□□□□ -0.11
CHD4-204ENST00000535810 FRMPD1Q5SYB0 1578 aa14.34□□□□□ -0.11
CHD4-204ENST00000535810 LMTK3Q96Q04 1460 aa14.33□□□□□ -0.12
CHD4-204ENST00000535810 FYCO1Q9BQS8 1478 aa14.33□□□□□ -0.12
CHD4-204ENST00000535810 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
CHD4-204ENST00000535810 KIF14Q15058 1648 aa14.33□□□□□ -0.12
CHD4-204ENST00000535810 CFAP74Q9C0B2 1584 aa14.32□□□□□ -0.12
CHD4-204ENST00000535810 RAPGEF3O95398 923 aa14.32□□□□□ -0.12
CHD4-204ENST00000535810 AKNAQ7Z591 1439 aa14.32□□□□□ -0.12
CHD4-204ENST00000535810 PLCH2O75038 1416 aa14.31□□□□□ -0.12
CHD4-204ENST00000535810 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
CHD4-204ENST00000535810 CEP162Q5TB80 1403 aa14.29□□□□□ -0.12
CHD4-204ENST00000535810 DENND4BO75064 1496 aaPredicted RBP14.29□□□□□ -0.12
CHD4-204ENST00000535810 MYO5CQ9NQX4 1742 aa14.28□□□□□ -0.12
CHD4-204ENST00000535810 RICTORQ6R327 1708 aa14.27□□□□□ -0.12
CHD4-204ENST00000535810 SOCS7O14512 581 aa14.25□□□□□ -0.13
CHD4-204ENST00000535810 ZMYM4Q5VZL5 1548 aa14.25□□□□□ -0.13
CHD4-204ENST00000535810 ARHGEF40Q8TER5 1519 aa14.25□□□□□ -0.13
CHD4-204ENST00000535810 POGZQ7Z3K3 1410 aa14.24□□□□□ -0.13
CHD4-204ENST00000535810 SCAPERQ9BY12 1400 aa14.24□□□□□ -0.13
CHD4-204ENST00000535810 EFCAB2Q5VUJ9 269 aa14.23□□□□□ -0.13
CHD4-204ENST00000535810 ARHGAP5Q13017 1502 aa14.23□□□□□ -0.13
CHD4-204ENST00000535810 PTPRMP28827 1452 aa14.21□□□□□ -0.13
CHD4-204ENST00000535810 LOC105371045A0A1W2PR82 267 aa14.21□□□□□ -0.13
CHD4-204ENST00000535810 PREX2Q70Z35 1606 aa14.21□□□□□ -0.13
CHD4-204ENST00000535810 CDC42BPBQ9Y5S2 1711 aa14.2□□□□□ -0.14
CHD4-204ENST00000535810 ZFYVE16Q7Z3T8 1539 aa14.2□□□□□ -0.14
CHD4-204ENST00000535810 MAGI2Q86UL8 1455 aa14.19□□□□□ -0.14
CHD4-204ENST00000535810 YEATS2Q9ULM3 1422 aa14.19□□□□□ -0.14
CHD4-204ENST00000535810 ILDR2Q71H61 639 aa14.18□□□□□ -0.14
CHD4-204ENST00000535810 CDC42BPAQ5VT25 1732 aa14.18□□□□□ -0.14
CHD4-204ENST00000535810 ZNF518AQ6AHZ1 1483 aa14.17□□□□□ -0.14
CHD4-204ENST00000535810 ABCC1P33527 1531 aa14.16□□□□□ -0.14
CHD4-204ENST00000535810 KDM5CP41229 1560 aa14.16□□□□□ -0.14
CHD4-204ENST00000535810 ADAMTSL3P82987 1691 aa14.16□□□□□ -0.14
CHD4-204ENST00000535810 GPATCH8Q9UKJ3 1502 aaKnown RBP14.15□□□□□ -0.14
CHD4-204ENST00000535810 MTUS2Q5JR59 1369 aa14.15□□□□□ -0.14
CHD4-204ENST00000535810 DISP3Q9P2K9 1392 aa14.15□□□□□ -0.14
CHD4-204ENST00000535810 CERKQ8TCT0 537 aa14.15□□□□□ -0.14
CHD4-204ENST00000535810 BCORL1Q5H9F3 1711 aa14.15□□□□□ -0.14
CHD4-204ENST00000535810 HOXD11P31277 338 aaPredicted RBP14.14□□□□□ -0.15
CHD4-204ENST00000535810 SIGLEC1Q9BZZ2 1709 aa14.14□□□□□ -0.15
CHD4-204ENST00000535810 EHBP1L1Q8N3D4 1523 aa14.14□□□□□ -0.15
CHD4-204ENST00000535810 ARHGEF12Q9NZN5 1544 aa14.14□□□□□ -0.15
CHD4-204ENST00000535810 ARID4BQ4LE39 1312 aaPredicted RBP14.14□□□□□ -0.15
CHD4-204ENST00000535810 AFAP1Q8N556 730 aa14.13□□□□□ -0.15
CHD4-204ENST00000535810 VPS8Q8N3P4 1428 aa14.13□□□□□ -0.15
CHD4-204ENST00000535810 ITSN2Q9NZM3 1697 aa14.12□□□□□ -0.15
CHD4-204ENST00000535810 TRAPPC8Q9Y2L5 1435 aa14.12□□□□□ -0.15
CHD4-204ENST00000535810 SAMD9LQ8IVG5 1584 aa14.12□□□□□ -0.15
CHD4-204ENST00000535810 MADDQ8WXG6 1647 aa14.12□□□□□ -0.15
CHD4-204ENST00000535810 C9orf84Q5VXU9 1444 aa14.11□□□□□ -0.15
CHD4-204ENST00000535810 ATP10AO60312 1499 aa14.11□□□□□ -0.15
CHD4-204ENST00000535810 CCNB3Q8WWL7 1395 aa14.1□□□□□ -0.15
CHD4-204ENST00000535810 MLH3Q9UHC1 1453 aa14.1□□□□□ -0.15
CHD4-204ENST00000535810 TIAM1Q13009 1591 aa14.09□□□□□ -0.15
CHD4-204ENST00000535810 SYCP2Q9BX26 1530 aa14.09□□□□□ -0.15
CHD4-204ENST00000535810 DIP2CQ9Y2E4 1556 aa14.09□□□□□ -0.15
CHD4-204ENST00000535810 CFDP1Q9UEE9 299 aaPredicted RBP14.08□□□□□ -0.16
CHD4-204ENST00000535810 ZNF777Q9ULD5 760 aaPredicted RBP14.08□□□□□ -0.16
CHD4-204ENST00000535810 ABCA6Q8N139 1617 aa14.07□□□□□ -0.16
CHD4-204ENST00000535810 KIAA1107Q9UPP5 1409 aa14.07□□□□□ -0.16
CHD4-204ENST00000535810 PLEKHH2Q8IVE3 1493 aa14.06□□□□□ -0.16
CHD4-204ENST00000535810 HSPA2P54652 639 aa14.06□□□□□ -0.16
CHD4-204ENST00000535810 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
CHD4-204ENST00000535810 REREQ9P2R6 1566 aa14.05□□□□□ -0.16
CHD4-204ENST00000535810 RIMS1Q86UR5 1692 aaKnown RBP14.05□□□□□ -0.16
CHD4-204ENST00000535810 SUPT6HQ7KZ85 1726 aaKnown RBP14.04□□□□□ -0.16
CHD4-204ENST00000535810 KIDINS220Q9ULH0 1771 aa14.04□□□□□ -0.16
CHD4-204ENST00000535810 ZBTB22O15209 634 aa14.04□□□□□ -0.16
CHD4-204ENST00000535810 HNRNPMP52272 730 aaKnown RBP eCLIP14.03□□□□□ -0.16
CHD4-204ENST00000535810 MLECQ14165 292 aa14.03□□□□□ -0.16
CHD4-204ENST00000535810 MYT1LQ9UL68 1186 aa14.03□□□□□ -0.16
CHD4-204ENST00000535810 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
CHD4-204ENST00000535810 MAP3K1Q13233 1512 aa14.03□□□□□ -0.16
CHD4-204ENST00000535810 FER1L4A9Z1Z3 1794 aa14.01□□□□□ -0.17
CHD4-204ENST00000535810 ZNF644Q9H582 1327 aaPredicted RBP14.01□□□□□ -0.17
CHD4-204ENST00000535810 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
CHD4-204ENST00000535810 AGLP35573 1532 aa14□□□□□ -0.17
CHD4-204ENST00000535810 MBD5Q9P267 1494 aa14□□□□□ -0.17
CHD4-204ENST00000535810 SPAG9O60271 1321 aaKnown RBP14□□□□□ -0.17
CHD4-204ENST00000535810 ATP7AQ04656 1500 aa14□□□□□ -0.17
CHD4-204ENST00000535810 KANK4Q5T7N3 995 aaPredicted RBP13.98□□□□□ -0.17
CHD4-204ENST00000535810 CAMSAP2Q08AD1 1489 aa13.98□□□□□ -0.17
CHD4-204ENST00000535810 PLXNC1O60486 1568 aa13.96□□□□□ -0.18
CHD4-204ENST00000535810 CCDC141Q6ZP82 1450 aa13.94□□□□□ -0.18
CHD4-204ENST00000535810 A2MP01023 1474 aa13.93□□□□□ -0.18
CHD4-204ENST00000535810 RTEL1-TNFRSF6BF6WH68 1400 aa13.92□□□□□ -0.18
CHD4-204ENST00000535810 MYOM3Q5VTT5 1437 aa13.92□□□□□ -0.18
CHD4-204ENST00000535810 ARHGEF5Q12774 1597 aa13.92□□□□□ -0.18
CHD4-204ENST00000535810 ADGBQ8N7X0 1667 aa13.91□□□□□ -0.18
CHD4-204ENST00000535810 MIA2Q96PC5 1412 aa13.9□□□□□ -0.18
CHD4-204ENST00000535810 CEBPAP49715 358 aaPredicted RBP13.9□□□□□ -0.18
CHD4-204ENST00000535810 APLP2Q06481 763 aa13.9□□□□□ -0.18
CHD4-204ENST00000535810 SPATA31D1Q6ZQQ2 1576 aa13.9□□□□□ -0.18
CHD4-204ENST00000535810 RSPH4AQ5TD94 716 aa13.89□□□□□ -0.19
CHD4-204ENST00000535810 CNTLNQ9NXG0 1405 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms