RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 ZFYVE16Q7Z3T8 1539 aa33.82■■■■□ 3
LTBR-205ENST00000535739 SIGLEC1Q9BZZ2 1709 aa33.79■■■■□ 3
LTBR-205ENST00000535739 RIMS1Q86UR5 1692 aaKnown RBP33.78■■■■□ 3
LTBR-205ENST00000535739 TROQ12816 1431 aaPredicted RBP33.78■■■■□ 3
LTBR-205ENST00000535739 POGZQ7Z3K3 1410 aa33.78■■■■□ 3
LTBR-205ENST00000535739 MAGI2Q86UL8 1455 aa33.77■■■■□ 3
LTBR-205ENST00000535739 EFCAB2Q5VUJ9 269 aa33.77■■■■□ 3
LTBR-205ENST00000535739 CLIP1P30622 1438 aa33.71■■■□□ 2.99
LTBR-205ENST00000535739 PCF11O94913 1555 aaKnown RBP33.69■■■□□ 2.98
LTBR-205ENST00000535739 ARHGAP5Q13017 1502 aa33.68■■■□□ 2.98
LTBR-205ENST00000535739 CASKIN1Q8WXD9 1431 aa33.66■■■□□ 2.98
LTBR-205ENST00000535739 MLECQ14165 292 aa33.65■■■□□ 2.98
LTBR-205ENST00000535739 CDC42BPBQ9Y5S2 1711 aa33.63■■■□□ 2.97
LTBR-205ENST00000535739 PLPPR3Q6T4P5 718 aa33.63■■■□□ 2.97
LTBR-205ENST00000535739 ATP10AO60312 1499 aa33.62■■■□□ 2.97
LTBR-205ENST00000535739 CCDC18Q5T9S5 1454 aa33.62■■■□□ 2.97
LTBR-205ENST00000535739 LMTK3Q96Q04 1460 aa33.61■■■□□ 2.97
LTBR-205ENST00000535739 FER1L4A9Z1Z3 1794 aa33.6■■■□□ 2.97
LTBR-205ENST00000535739 ZNF518AQ6AHZ1 1483 aa33.59■■■□□ 2.97
LTBR-205ENST00000535739 AFAP1Q8N556 730 aa33.58■■■□□ 2.97
LTBR-205ENST00000535739 C9orf84Q5VXU9 1444 aa33.57■■■□□ 2.96
LTBR-205ENST00000535739 KDM5CP41229 1560 aa33.55■■■□□ 2.96
LTBR-205ENST00000535739 PREX2Q70Z35 1606 aa33.54■■■□□ 2.96
LTBR-205ENST00000535739 FYCO1Q9BQS8 1478 aa33.52■■■□□ 2.96
LTBR-205ENST00000535739 ARHGEF12Q9NZN5 1544 aa33.5■■■□□ 2.95
LTBR-205ENST00000535739 MYT1LQ9UL68 1186 aa33.5■■■□□ 2.95
LTBR-205ENST00000535739 CDC42BPAQ5VT25 1732 aa33.48■■■□□ 2.95
LTBR-205ENST00000535739 HSPA2P54652 639 aa33.46■■■□□ 2.95
LTBR-205ENST00000535739 ABCC1P33527 1531 aa33.46■■■□□ 2.95
LTBR-205ENST00000535739 DIP2CQ9Y2E4 1556 aa33.46■■■□□ 2.95
LTBR-205ENST00000535739 ITSN2Q9NZM3 1697 aa33.44■■■□□ 2.94
LTBR-205ENST00000535739 TRAPPC8Q9Y2L5 1435 aa33.44■■■□□ 2.94
LTBR-205ENST00000535739 ABCA6Q8N139 1617 aa33.42■■■□□ 2.94
LTBR-205ENST00000535739 MLH3Q9UHC1 1453 aa33.41■■■□□ 2.94
LTBR-205ENST00000535739 REREQ9P2R6 1566 aa33.37■■■□□ 2.93
LTBR-205ENST00000535739 CEBPAP49715 358 aaPredicted RBP33.36■■■□□ 2.93
LTBR-205ENST00000535739 ZNF777Q9ULD5 760 aaPredicted RBP33.33■■■□□ 2.93
LTBR-205ENST00000535739 KIDINS220Q9ULH0 1771 aa33.33■■■□□ 2.93
LTBR-205ENST00000535739 GPATCH8Q9UKJ3 1502 aaKnown RBP33.32■■■□□ 2.92
LTBR-205ENST00000535739 SAMD9LQ8IVG5 1584 aa33.31■■■□□ 2.92
LTBR-205ENST00000535739 FBXO41Q8TF61 875 aa33.31■■■□□ 2.92
LTBR-205ENST00000535739 PREX1Q8TCU6 1659 aa33.3■■■□□ 2.92
LTBR-205ENST00000535739 AGLP35573 1532 aa33.27■■■□□ 2.92
LTBR-205ENST00000535739 SYCP2Q9BX26 1530 aa33.26■■■□□ 2.91
LTBR-205ENST00000535739 SETD1BQ9UPS6 1966 aaKnown RBP33.25■■■□□ 2.91
LTBR-205ENST00000535739 HNRNPMP52272 730 aaKnown RBP eCLIP33.23■■■□□ 2.91
LTBR-205ENST00000535739 MTUS2Q5JR59 1369 aa33.21■■■□□ 2.91
LTBR-205ENST00000535739 C3P01024 1663 aa33.2■■■□□ 2.91
LTBR-205ENST00000535739 CFDP1Q9UEE9 299 aaPredicted RBP33.2■■■□□ 2.91
LTBR-205ENST00000535739 CCNB3Q8WWL7 1395 aa33.2■■■□□ 2.9
LTBR-205ENST00000535739 ESF1Q9H501 851 aaKnown RBP33.17■■■□□ 2.9
LTBR-205ENST00000535739 SPAG9O60271 1321 aaKnown RBP33.17■■■□□ 2.9
LTBR-205ENST00000535739 CEP162Q5TB80 1403 aa33.14■■■□□ 2.9
LTBR-205ENST00000535739 UHRF1BP1Q6BDS2 1440 aa33.14■■■□□ 2.9
LTBR-205ENST00000535739 KIAA1107Q9UPP5 1409 aa33.14■■■□□ 2.9
LTBR-205ENST00000535739 PLEKHH2Q8IVE3 1493 aa33.13■■■□□ 2.89
LTBR-205ENST00000535739 SUPT6HQ7KZ85 1726 aaKnown RBP33.11■■■□□ 2.89
LTBR-205ENST00000535739 ATP7AQ04656 1500 aa33.11■■■□□ 2.89
LTBR-205ENST00000535739 STRCQ7RTU9 1775 aa33.1■■■□□ 2.89
LTBR-205ENST00000535739 TIAM1Q13009 1591 aa33.09■■■□□ 2.89
LTBR-205ENST00000535739 EHBP1L1Q8N3D4 1523 aa33.09■■■□□ 2.89
LTBR-205ENST00000535739 INO80Q9ULG1 1556 aaPredicted RBP33.08■■■□□ 2.89
LTBR-205ENST00000535739 CNTLNQ9NXG0 1405 aa33.06■■■□□ 2.88
LTBR-205ENST00000535739 ZNF644Q9H582 1327 aaPredicted RBP33.05■■■□□ 2.88
LTBR-205ENST00000535739 CERKQ8TCT0 537 aa33.02■■■□□ 2.88
LTBR-205ENST00000535739 A2MP01023 1474 aa33.01■■■□□ 2.88
LTBR-205ENST00000535739 MROH2AA6NES4 1674 aa33.01■■■□□ 2.87
LTBR-205ENST00000535739 PLXNC1O60486 1568 aa33■■■□□ 2.87
LTBR-205ENST00000535739 DMRT2Q9Y5R5 561 aa32.97■■■□□ 2.87
LTBR-205ENST00000535739 MBD5Q9P267 1494 aa32.96■■■□□ 2.87
LTBR-205ENST00000535739 ZMYM3Q14202 1370 aa32.96■■■□□ 2.87
LTBR-205ENST00000535739 CLTCQ00610 1675 aaKnown RBP32.95■■■□□ 2.87
LTBR-205ENST00000535739 ADGBQ8N7X0 1667 aa32.95■■■□□ 2.87
LTBR-205ENST00000535739 GGT6Q6P531 493 aa32.91■■■□□ 2.86
LTBR-205ENST00000535739 NPATQ14207 1427 aa32.9■■■□□ 2.86
LTBR-205ENST00000535739 NCOA2Q15596 1464 aa32.9■■■□□ 2.86
LTBR-205ENST00000535739 LOC105371045A0A1W2PR82 267 aa32.89■■■□□ 2.86
LTBR-205ENST00000535739 RTEL1-TNFRSF6BF6WH68 1400 aa32.85■■■□□ 2.85
LTBR-205ENST00000535739 PTPRTO14522 1441 aa32.85■■■□□ 2.85
LTBR-205ENST00000535739 CAMSAP2Q08AD1 1489 aa32.83■■■□□ 2.85
LTBR-205ENST00000535739 NCOA1Q15788 1441 aa32.83■■■□□ 2.85
LTBR-205ENST00000535739 CAMSAP1Q5T5Y3 1602 aa32.8■■■□□ 2.84
LTBR-205ENST00000535739 CCDC141Q6ZP82 1450 aa32.8■■■□□ 2.84
LTBR-205ENST00000535739 PTPRKQ15262 1439 aa32.79■■■□□ 2.84
LTBR-205ENST00000535739 DHX29Q7Z478 1369 aaKnown RBP32.79■■■□□ 2.84
LTBR-205ENST00000535739 VPS8Q8N3P4 1428 aa32.78■■■□□ 2.84
LTBR-205ENST00000535739 PPP6R1Q9UPN7 881 aa32.78■■■□□ 2.84
LTBR-205ENST00000535739 MYO3AQ8NEV4 1616 aa32.77■■■□□ 2.84
LTBR-205ENST00000535739 ZNF142P52746 1687 aaPredicted RBP32.74■■■□□ 2.83
LTBR-205ENST00000535739 LRRC9Q6ZRR7 1453 aa32.74■■■□□ 2.83
LTBR-205ENST00000535739 RSPH4AQ5TD94 716 aa32.73■■■□□ 2.83
LTBR-205ENST00000535739 KIF3BO15066 747 aa32.71■■■□□ 2.83
LTBR-205ENST00000535739 CEP170BQ9Y4F5 1589 aaPredicted RBP32.7■■■□□ 2.83
LTBR-205ENST00000535739 NCKAP5LQ9HCH0 1330 aa32.7■■■□□ 2.82
LTBR-205ENST00000535739 ARHGEF5Q12774 1597 aa32.7■■■□□ 2.82
LTBR-205ENST00000535739 LTBP4Q8N2S1 1624 aa32.69■■■□□ 2.82
LTBR-205ENST00000535739 KANK4Q5T7N3 995 aaPredicted RBP32.65■■■□□ 2.82
LTBR-205ENST00000535739 TSPY4P0CV99 314 aa32.64■■■□□ 2.82
LTBR-205ENST00000535739 TSPY10P0CW01 314 aa32.64■■■□□ 2.82
LTBR-205ENST00000535739 PLA2R1Q13018 1463 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms