RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 PLSCR2Q9NRY7 297 aa16.56■□□□□ 0.24
LMO3-212ENST00000535535 PPP1R37O75864 691 aa16.55■□□□□ 0.24
LMO3-212ENST00000535535 DNAJC5Q9H3Z4 198 aa16.55■□□□□ 0.24
LMO3-212ENST00000535535 EMP3P54852 163 aa16.54■□□□□ 0.24
LMO3-212ENST00000535535 KIF3CO14782 793 aa16.51■□□□□ 0.23
LMO3-212ENST00000535535 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
LMO3-212ENST00000535535 ZNF710Q8N1W2 664 aa16.5■□□□□ 0.23
LMO3-212ENST00000535535 HOXB1P14653 301 aaPredicted RBP16.49■□□□□ 0.23
LMO3-212ENST00000535535 C2orf72A6NCS6 295 aa16.46■□□□□ 0.23
LMO3-212ENST00000535535 RIMBP2O15034 1052 aa16.46■□□□□ 0.23
LMO3-212ENST00000535535 POTEB3A0JP26 581 aa16.43■□□□□ 0.22
LMO3-212ENST00000535535 POTEBQ6S5H4 581 aa16.43■□□□□ 0.22
LMO3-212ENST00000535535 ZSWIM6Q9HCJ5 1215 aa16.43■□□□□ 0.22
LMO3-212ENST00000535535 HS3ST6Q96QI5 342 aa16.42■□□□□ 0.22
LMO3-212ENST00000535535 FAM205CA6NFA0 338 aa16.42■□□□□ 0.22
LMO3-212ENST00000535535 GPR153Q6NV75 609 aa16.38■□□□□ 0.21
LMO3-212ENST00000535535 TMC2Q8TDI7 906 aa16.36■□□□□ 0.21
LMO3-212ENST00000535535 RYDENQ9NUL5 291 aaKnown RBP16.33■□□□□ 0.2
LMO3-212ENST00000535535 DCAF8L2P0C7V8 631 aa16.32■□□□□ 0.2
LMO3-212ENST00000535535 ERBB3P21860 1342 aa16.29■□□□□ 0.2
LMO3-212ENST00000535535 ARSIQ5FYB1 569 aa16.29■□□□□ 0.2
LMO3-212ENST00000535535 KRTAP3-3Q9BYR6 98 aa16.29■□□□□ 0.2
LMO3-212ENST00000535535 KRTAP3-2Q9BYR7 98 aa16.29■□□□□ 0.2
LMO3-212ENST00000535535 GTPBP6O43824 516 aaPredicted RBP16.26■□□□□ 0.19
LMO3-212ENST00000535535 SLC34A2O95436 690 aa16.26■□□□□ 0.19
LMO3-212ENST00000535535 KHSRPQ92945 711 aaKnown RBP eCLIP16.25■□□□□ 0.19
LMO3-212ENST00000535535 VARS2Q5ST30 1063 aaKnown RBP16.24■□□□□ 0.19
LMO3-212ENST00000535535 GPHNQ9NQX3 736 aaPredicted RBP16.23■□□□□ 0.19
LMO3-212ENST00000535535 FOXK1P85037 733 aa16.21■□□□□ 0.19
LMO3-212ENST00000535535 PCDHGA4Q9Y5G9 962 aa16.19■□□□□ 0.18
LMO3-212ENST00000535535 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
LMO3-212ENST00000535535 SPNS2Q8IVW8 549 aa16.18■□□□□ 0.18
LMO3-212ENST00000535535 DSG2Q14126 1118 aa16.16■□□□□ 0.18
LMO3-212ENST00000535535 PLPP6Q8IY26 295 aa16.16■□□□□ 0.18
LMO3-212ENST00000535535 CRISPLD2Q9H0B8 497 aa16.16■□□□□ 0.18
LMO3-212ENST00000535535 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
LMO3-212ENST00000535535 NUDT7P0C024 238 aa16.15■□□□□ 0.18
LMO3-212ENST00000535535 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
LMO3-212ENST00000535535 ZNF687Q8N1G0 1237 aa16.12■□□□□ 0.17
LMO3-212ENST00000535535 PTCD2Q8WV60 388 aaKnown RBP16.1■□□□□ 0.17
LMO3-212ENST00000535535 NCKAP5LQ9HCH0 1330 aa16.1■□□□□ 0.17
LMO3-212ENST00000535535 MMRN1Q13201 1228 aa16.09■□□□□ 0.17
LMO3-212ENST00000535535 LHX6Q9UPM6 363 aa16.06■□□□□ 0.16
LMO3-212ENST00000535535 KDM4FA0A1W2PPD8 638 aa16.05■□□□□ 0.16
LMO3-212ENST00000535535 PPP1R15BQ5SWA1 713 aa16.03■□□□□ 0.16
LMO3-212ENST00000535535 PDE4AP27815 886 aa16■□□□□ 0.15
LMO3-212ENST00000535535 BBXQ8WY36 941 aaPredicted RBP16■□□□□ 0.15
LMO3-212ENST00000535535 OXER1Q8TDS5 423 aa15.97■□□□□ 0.15
LMO3-212ENST00000535535 CADPS2Q86UW7 1296 aa15.96■□□□□ 0.14
LMO3-212ENST00000535535 MFSD10Q14728 455 aa15.95■□□□□ 0.14
LMO3-212ENST00000535535 TBC1D12O60347 775 aa15.93■□□□□ 0.14
LMO3-212ENST00000535535 LARP6Q9BRS8 491 aaKnown RBP15.93■□□□□ 0.14
LMO3-212ENST00000535535 POTEEQ6S8J3 1075 aa15.91■□□□□ 0.14
LMO3-212ENST00000535535 UPF1Q92900 1129 aaKnown RBP eCLIP15.91■□□□□ 0.14
LMO3-212ENST00000535535 DDX27Q96GQ7 796 aaKnown RBP15.91■□□□□ 0.14
LMO3-212ENST00000535535 PSDA5PKW4 1024 aaPredicted RBP15.91■□□□□ 0.14
LMO3-212ENST00000535535 PBX2P40425 430 aa15.91■□□□□ 0.14
LMO3-212ENST00000535535 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
LMO3-212ENST00000535535 LSM11P83369 360 aaKnown RBP eCLIP15.88■□□□□ 0.13
LMO3-212ENST00000535535 AXIN2Q9Y2T1 843 aa15.84■□□□□ 0.13
LMO3-212ENST00000535535 ANKRD13DQ6ZTN6 518 aa15.81■□□□□ 0.12
LMO3-212ENST00000535535 PPP4R3BQ5MIZ7 849 aa15.79■□□□□ 0.12
LMO3-212ENST00000535535 SPRYD3Q8NCJ5 442 aa15.79■□□□□ 0.12
LMO3-212ENST00000535535 PTGER2P43116 358 aa15.78■□□□□ 0.12
LMO3-212ENST00000535535 EMILIN3Q9NT22 766 aa15.78■□□□□ 0.12
LMO3-212ENST00000535535 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.78■□□□□ 0.12
LMO3-212ENST00000535535 ARHGAP33O14559 1287 aa15.77■□□□□ 0.11
LMO3-212ENST00000535535 MYT1LQ9UL68 1186 aa15.77■□□□□ 0.11
LMO3-212ENST00000535535 RNF166Q96A37 237 aaPredicted RBP15.76■□□□□ 0.11
LMO3-212ENST00000535535 ANO8Q9HCE9 1232 aaPredicted RBP15.74■□□□□ 0.11
LMO3-212ENST00000535535 EVI5O60447 810 aa15.73■□□□□ 0.11
LMO3-212ENST00000535535 PSEN2P49810 448 aa15.71■□□□□ 0.1
LMO3-212ENST00000535535 FOSBP53539 338 aa15.71■□□□□ 0.1
LMO3-212ENST00000535535 CAMK2BQ13554 666 aa15.71■□□□□ 0.1
LMO3-212ENST00000535535 ZNF454Q8N9F8 522 aa15.71■□□□□ 0.1
LMO3-212ENST00000535535 DMRTA1Q5VZB9 504 aa15.7■□□□□ 0.1
LMO3-212ENST00000535535 NACADO15069 1562 aa15.7■□□□□ 0.1
LMO3-212ENST00000535535 MAP3K9P80192 1104 aa15.69■□□□□ 0.1
LMO3-212ENST00000535535 PAXIP1Q6ZW49 1069 aaPredicted RBP15.68■□□□□ 0.1
LMO3-212ENST00000535535 JPH4Q96JJ6 628 aa15.68■□□□□ 0.1
LMO3-212ENST00000535535 ADGRD1Q6QNK2 874 aa15.67■□□□□ 0.1
LMO3-212ENST00000535535 CFAP44Q96MT7 982 aa15.66■□□□□ 0.1
LMO3-212ENST00000535535 KCNK17Q96T54 332 aa15.65■□□□□ 0.1
LMO3-212ENST00000535535 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
LMO3-212ENST00000535535 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
LMO3-212ENST00000535535 TK2O00142 265 aa15.64■□□□□ 0.09
LMO3-212ENST00000535535 HRO43593 1189 aa15.59■□□□□ 0.09
LMO3-212ENST00000535535 KCNH8Q96L42 1107 aa15.59■□□□□ 0.09
LMO3-212ENST00000535535 DPYSL4O14531 572 aa15.58■□□□□ 0.08
LMO3-212ENST00000535535 ZDHHC16Q969W1 377 aa15.58■□□□□ 0.08
LMO3-212ENST00000535535 ADAM33Q9BZ11 813 aa15.57■□□□□ 0.08
LMO3-212ENST00000535535 PCDHGA10Q9Y5H3 936 aa15.54■□□□□ 0.08
LMO3-212ENST00000535535 PTPREP23469 700 aa15.53■□□□□ 0.08
LMO3-212ENST00000535535 VPS9D1Q9Y2B5 631 aa15.52■□□□□ 0.07
LMO3-212ENST00000535535 SLC4A5Q9BY07 1137 aa15.51■□□□□ 0.07
LMO3-212ENST00000535535 PHF14O94880 888 aa15.5■□□□□ 0.07
LMO3-212ENST00000535535 ZBED2Q9BTP6 218 aa15.48■□□□□ 0.07
LMO3-212ENST00000535535 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
LMO3-212ENST00000535535 TYW1BQ6NUM6 668 aa15.46■□□□□ 0.07
LMO3-212ENST00000535535 PDIA6Q15084 440 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms