RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 CCNB3Q8WWL7 1395 aa34.36■■■■□ 3.09
SSPN-204ENST00000535504 PREX2Q70Z35 1606 aa34.35■■■■□ 3.09
SSPN-204ENST00000535504 SCAPERQ9BY12 1400 aa34.31■■■■□ 3.08
SSPN-204ENST00000535504 MAP3K1Q13233 1512 aa34.3■■■■□ 3.08
SSPN-204ENST00000535504 SUPT6HQ7KZ85 1726 aaKnown RBP34.29■■■■□ 3.08
SSPN-204ENST00000535504 CDC42BPBQ9Y5S2 1711 aa34.29■■■■□ 3.08
SSPN-204ENST00000535504 CDC42BPAQ5VT25 1732 aa34.28■■■■□ 3.08
SSPN-204ENST00000535504 CFDP1Q9UEE9 299 aaPredicted RBP34.26■■■■□ 3.08
SSPN-204ENST00000535504 ZNF777Q9ULD5 760 aaPredicted RBP34.25■■■■□ 3.07
SSPN-204ENST00000535504 LRRC9Q6ZRR7 1453 aa34.23■■■■□ 3.07
SSPN-204ENST00000535504 RICTORQ6R327 1708 aa34.23■■■■□ 3.07
SSPN-204ENST00000535504 GPATCH8Q9UKJ3 1502 aaKnown RBP34.23■■■■□ 3.07
SSPN-204ENST00000535504 POGZQ7Z3K3 1410 aa34.22■■■■□ 3.07
SSPN-204ENST00000535504 ITSN2Q9NZM3 1697 aa34.22■■■■□ 3.07
SSPN-204ENST00000535504 FRMPD1Q5SYB0 1578 aa34.21■■■■□ 3.07
SSPN-204ENST00000535504 AEBP2Q6ZN18 517 aaPredicted RBP34.19■■■■□ 3.06
SSPN-204ENST00000535504 MYT1LQ9UL68 1186 aa34.19■■■■□ 3.06
SSPN-204ENST00000535504 ZNF518AQ6AHZ1 1483 aa34.19■■■■□ 3.06
SSPN-204ENST00000535504 NCOA2Q15596 1464 aa34.18■■■■□ 3.06
SSPN-204ENST00000535504 PLEKHH2Q8IVE3 1493 aa34.16■■■■□ 3.06
SSPN-204ENST00000535504 ZMYM4Q5VZL5 1548 aa34.15■■■■□ 3.06
SSPN-204ENST00000535504 MAGI2Q86UL8 1455 aa34.15■■■■□ 3.06
SSPN-204ENST00000535504 ABCC1P33527 1531 aa34.14■■■■□ 3.06
SSPN-204ENST00000535504 ZFYVE16Q7Z3T8 1539 aa34.11■■■■□ 3.05
SSPN-204ENST00000535504 ARHGEF40Q8TER5 1519 aa34.1■■■■□ 3.05
SSPN-204ENST00000535504 KANK4Q5T7N3 995 aaPredicted RBP34.09■■■■□ 3.05
SSPN-204ENST00000535504 SAMD9LQ8IVG5 1584 aa34.07■■■■□ 3.05
SSPN-204ENST00000535504 ARID4BQ4LE39 1312 aaPredicted RBP34.06■■■■□ 3.04
SSPN-204ENST00000535504 AFAP1Q8N556 730 aa34.06■■■■□ 3.04
SSPN-204ENST00000535504 KIAA1107Q9UPP5 1409 aa34.04■■■■□ 3.04
SSPN-204ENST00000535504 SYCP2Q9BX26 1530 aa34.04■■■■□ 3.04
SSPN-204ENST00000535504 KDM5CP41229 1560 aa34.02■■■■□ 3.04
SSPN-204ENST00000535504 HECW2Q9P2P5 1572 aa34.01■■■■□ 3.03
SSPN-204ENST00000535504 TRAPPC8Q9Y2L5 1435 aa34■■■■□ 3.03
SSPN-204ENST00000535504 HNRNPMP52272 730 aaKnown RBP eCLIP33.99■■■■□ 3.03
SSPN-204ENST00000535504 ARHGEF12Q9NZN5 1544 aa33.99■■■■□ 3.03
SSPN-204ENST00000535504 YEATS2Q9ULM3 1422 aa33.97■■■■□ 3.03
SSPN-204ENST00000535504 MLH3Q9UHC1 1453 aa33.95■■■■□ 3.02
SSPN-204ENST00000535504 KDM4FA0A1W2PPD8 638 aa33.94■■■■□ 3.02
SSPN-204ENST00000535504 SPAG9O60271 1321 aaKnown RBP33.94■■■■□ 3.02
SSPN-204ENST00000535504 MYOM3Q5VTT5 1437 aa33.94■■■■□ 3.02
SSPN-204ENST00000535504 ATP10AO60312 1499 aa33.94■■■■□ 3.02
SSPN-204ENST00000535504 C9orf84Q5VXU9 1444 aa33.93■■■■□ 3.02
SSPN-204ENST00000535504 RSPH4AQ5TD94 716 aa33.92■■■■□ 3.02
SSPN-204ENST00000535504 CAMSAP2Q08AD1 1489 aa33.91■■■■□ 3.02
SSPN-204ENST00000535504 ZNF644Q9H582 1327 aaPredicted RBP33.91■■■■□ 3.02
SSPN-204ENST00000535504 MIA2Q96PC5 1412 aa33.9■■■■□ 3.02
SSPN-204ENST00000535504 CCDC141Q6ZP82 1450 aa33.83■■■■□ 3.01
SSPN-204ENST00000535504 DIP2CQ9Y2E4 1556 aa33.82■■■■□ 3
SSPN-204ENST00000535504 ATP7AQ04656 1500 aa33.81■■■■□ 3
SSPN-204ENST00000535504 TSPY4P0CV99 314 aa33.81■■■■□ 3
SSPN-204ENST00000535504 TSPY10P0CW01 314 aa33.81■■■■□ 3
SSPN-204ENST00000535504 MBD5Q9P267 1494 aa33.8■■■■□ 3
SSPN-204ENST00000535504 KIDINS220Q9ULH0 1771 aa33.8■■■■□ 3
SSPN-204ENST00000535504 ABCA6Q8N139 1617 aa33.79■■■■□ 3
SSPN-204ENST00000535504 BCORL1Q5H9F3 1711 aa33.79■■■■□ 3
SSPN-204ENST00000535504 ARHGEF5Q12774 1597 aa33.76■■■□□ 2.99
SSPN-204ENST00000535504 REREQ9P2R6 1566 aa33.76■■■□□ 2.99
SSPN-204ENST00000535504 MLECQ14165 292 aa33.75■■■□□ 2.99
SSPN-204ENST00000535504 INO80Q9ULG1 1556 aaPredicted RBP33.75■■■□□ 2.99
SSPN-204ENST00000535504 RTEL1-TNFRSF6BF6WH68 1400 aa33.74■■■□□ 2.99
SSPN-204ENST00000535504 FGD6Q6ZV73 1430 aa33.72■■■□□ 2.99
SSPN-204ENST00000535504 PTPN23Q9H3S7 1636 aa33.71■■■□□ 2.99
SSPN-204ENST00000535504 ADAMTSL3P82987 1691 aa33.71■■■□□ 2.99
SSPN-204ENST00000535504 ESF1Q9H501 851 aaKnown RBP33.68■■■□□ 2.98
SSPN-204ENST00000535504 AGLP35573 1532 aa33.66■■■□□ 2.98
SSPN-204ENST00000535504 ADGBQ8N7X0 1667 aa33.66■■■□□ 2.98
SSPN-204ENST00000535504 A2MP01023 1474 aa33.65■■■□□ 2.98
SSPN-204ENST00000535504 MADDQ8WXG6 1647 aa33.64■■■□□ 2.98
SSPN-204ENST00000535504 SIGLEC1Q9BZZ2 1709 aa33.64■■■□□ 2.98
SSPN-204ENST00000535504 FAM50AQ14320 339 aaKnown RBP33.6■■■□□ 2.97
SSPN-204ENST00000535504 TCOF1Q13428 1488 aaKnown RBP33.6■■■□□ 2.97
SSPN-204ENST00000535504 FER1L4A9Z1Z3 1794 aa33.6■■■□□ 2.97
SSPN-204ENST00000535504 RIMS1Q86UR5 1692 aaKnown RBP33.59■■■□□ 2.97
SSPN-204ENST00000535504 PTPRMP28827 1452 aa33.58■■■□□ 2.97
SSPN-204ENST00000535504 PPARGC1BQ86YN6 1023 aaKnown RBP33.58■■■□□ 2.97
SSPN-204ENST00000535504 MAST1Q9Y2H9 1570 aa33.56■■■□□ 2.96
SSPN-204ENST00000535504 PLXNC1O60486 1568 aa33.53■■■□□ 2.96
SSPN-204ENST00000535504 DHX29Q7Z478 1369 aaKnown RBP33.53■■■□□ 2.96
SSPN-204ENST00000535504 SHANK2Q9UPX8 1470 aa33.52■■■□□ 2.96
SSPN-204ENST00000535504 DNMT1P26358 1616 aaKnown RBP33.51■■■□□ 2.96
SSPN-204ENST00000535504 DAPK1P53355 1430 aa33.51■■■□□ 2.95
SSPN-204ENST00000535504 PLPPR3Q6T4P5 718 aa33.5■■■□□ 2.95
SSPN-204ENST00000535504 CROCC2H7BZ55 1655 aa33.48■■■□□ 2.95
SSPN-204ENST00000535504 ABCC5O15440 1437 aa33.48■■■□□ 2.95
SSPN-204ENST00000535504 GGT6Q6P531 493 aa33.47■■■□□ 2.95
SSPN-204ENST00000535504 CNTLNQ9NXG0 1405 aa33.46■■■□□ 2.95
SSPN-204ENST00000535504 KIF3BO15066 747 aa33.44■■■□□ 2.94
SSPN-204ENST00000535504 PPP6R1Q9UPN7 881 aa33.43■■■□□ 2.94
SSPN-204ENST00000535504 ANKRD30AQ9BXX3 1397 aa33.42■■■□□ 2.94
SSPN-204ENST00000535504 KIF15Q9NS87 1388 aa33.39■■■□□ 2.94
SSPN-204ENST00000535504 DUOX2Q9NRD8 1548 aa33.38■■■□□ 2.93
SSPN-204ENST00000535504 CHIC2Q9UKJ5 165 aa33.38■■■□□ 2.93
SSPN-204ENST00000535504 RRP7BPQ9NSQ0 103 aa33.36■■■□□ 2.93
SSPN-204ENST00000535504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.33■■■□□ 2.93
SSPN-204ENST00000535504 EIF2AK4Q9P2K8 1649 aaKnown RBP33.32■■■□□ 2.92
SSPN-204ENST00000535504 MROH2AA6NES4 1674 aa33.29■■■□□ 2.92
SSPN-204ENST00000535504 ERBINQ96RT1 1412 aa33.29■■■□□ 2.92
SSPN-204ENST00000535504 FAM135AQ9P2D6 1515 aa33.28■■■□□ 2.92
SSPN-204ENST00000535504 CEBPAP49715 358 aaPredicted RBP33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms