RNA–Protein interactions for RNA: ENST00000534995.1

KNTC1-206, Transcript of kinetochore associated 1, humanhuman

TSL 2 BASIC

Gene KNTC1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-206ENST00000534995 ZCCHC6Q5VYS8 1495 aaKnown RBP14.72□□□□□ -0.05
KNTC1-206ENST00000534995 L3MBTL3Q96JM7 780 aaPredicted RBP14.72□□□□□ -0.05
KNTC1-206ENST00000534995 CRISPLD2Q9H0B8 497 aa14.72□□□□□ -0.05
KNTC1-206ENST00000534995 TMEM92Q6UXU6 159 aa14.7□□□□□ -0.06
KNTC1-206ENST00000534995 G3V3G9 751 aa14.63□□□□□ -0.07
KNTC1-206ENST00000534995 KIF3CO14782 793 aa14.63□□□□□ -0.07
KNTC1-206ENST00000534995 MFSD10Q14728 455 aa14.63□□□□□ -0.07
KNTC1-206ENST00000534995 LARP6Q9BRS8 491 aaKnown RBP14.63□□□□□ -0.07
KNTC1-206ENST00000534995 PDE4AP27815 886 aa14.61□□□□□ -0.07
KNTC1-206ENST00000534995 GPHNQ9NQX3 736 aaPredicted RBP14.61□□□□□ -0.07
KNTC1-206ENST00000534995 C2orf72A6NCS6 295 aa14.6□□□□□ -0.07
KNTC1-206ENST00000534995 DSG2Q14126 1118 aa14.56□□□□□ -0.08
KNTC1-206ENST00000534995 C3orf67Q6ZVT6 689 aa14.55□□□□□ -0.08
KNTC1-206ENST00000534995 DDX27Q96GQ7 796 aaKnown RBP14.55□□□□□ -0.08
KNTC1-206ENST00000534995 TMC2Q8TDI7 906 aa14.54□□□□□ -0.08
KNTC1-206ENST00000534995 PPP1R15BQ5SWA1 713 aa14.53□□□□□ -0.08
KNTC1-206ENST00000534995 WDR70Q9NW82 654 aa14.53□□□□□ -0.08
KNTC1-206ENST00000534995 FOXK1P85037 733 aa14.52□□□□□ -0.09
KNTC1-206ENST00000534995 KCNV2Q8TDN2 545 aa14.51□□□□□ -0.09
KNTC1-206ENST00000534995 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.5□□□□□ -0.09
KNTC1-206ENST00000534995 DCAF1Q9Y4B6 1507 aa14.48□□□□□ -0.09
KNTC1-206ENST00000534995 PLPP6Q8IY26 295 aa14.47□□□□□ -0.09
KNTC1-206ENST00000534995 CAMK2BQ13554 666 aa14.46□□□□□ -0.09
KNTC1-206ENST00000534995 E2F4Q16254 413 aa14.46□□□□□ -0.09
KNTC1-206ENST00000534995 NACADO15069 1562 aa14.44□□□□□ -0.1
KNTC1-206ENST00000534995 OTUD5Q96G74 571 aa14.44□□□□□ -0.1
KNTC1-206ENST00000534995 LHX8Q68G74 356 aa14.43□□□□□ -0.1
KNTC1-206ENST00000534995 EMILIN3Q9NT22 766 aa14.43□□□□□ -0.1
KNTC1-206ENST00000534995 RB1CC1Q8TDY2 1594 aa14.43□□□□□ -0.1
KNTC1-206ENST00000534995 SCUBE2Q9NQ36 999 aa14.4□□□□□ -0.1
KNTC1-206ENST00000534995 SLAIN1Q8ND83 568 aa14.39□□□□□ -0.11
KNTC1-206ENST00000534995 MAMSTRQ6ZN01 415 aa14.38□□□□□ -0.11
KNTC1-206ENST00000534995 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
KNTC1-206ENST00000534995 MYO15BQ96JP2 1530 aa14.36□□□□□ -0.11
KNTC1-206ENST00000534995 P3H3Q8IVL6 736 aa14.36□□□□□ -0.11
KNTC1-206ENST00000534995 ARIH1Q9Y4X5 557 aaPredicted RBP14.33□□□□□ -0.12
KNTC1-206ENST00000534995 ARHGEF1Q92888 912 aaKnown RBP14.32□□□□□ -0.12
KNTC1-206ENST00000534995 SCRIBQ14160 1630 aa14.3□□□□□ -0.12
KNTC1-206ENST00000534995 HOXB3P14651 431 aaPredicted RBP14.3□□□□□ -0.12
KNTC1-206ENST00000534995 DPYSL4O14531 572 aa14.29□□□□□ -0.12
KNTC1-206ENST00000534995 OXER1Q8TDS5 423 aa14.29□□□□□ -0.12
KNTC1-206ENST00000534995 UPF1Q92900 1129 aaKnown RBP eCLIP14.29□□□□□ -0.12
KNTC1-206ENST00000534995 SLC34A2O95436 690 aa14.26□□□□□ -0.13
KNTC1-206ENST00000534995 BCANQ96GW7 911 aa14.26□□□□□ -0.13
KNTC1-206ENST00000534995 PTCD2Q8WV60 388 aaKnown RBP14.25□□□□□ -0.13
KNTC1-206ENST00000534995 NBR1Q14596 966 aa14.21□□□□□ -0.13
KNTC1-206ENST00000534995 SHROOM4Q9ULL8 1493 aa14.2□□□□□ -0.14
KNTC1-206ENST00000534995 SEMA3EO15041 775 aa14.2□□□□□ -0.14
KNTC1-206ENST00000534995 PDIA6Q15084 440 aa14.19□□□□□ -0.14
KNTC1-206ENST00000534995 PCDHGA4Q9Y5G9 962 aa14.19□□□□□ -0.14
KNTC1-206ENST00000534995 MAP3K9P80192 1104 aa14.17□□□□□ -0.14
KNTC1-206ENST00000534995 KHSRPQ92945 711 aaKnown RBP eCLIP14.17□□□□□ -0.14
KNTC1-206ENST00000534995 KDM4FA0A1W2PPD8 638 aa14.15□□□□□ -0.14
KNTC1-206ENST00000534995 DOK7Q18PE1 504 aa14.15□□□□□ -0.14
KNTC1-206ENST00000534995 TESPA1A2RU30 521 aaPredicted RBP14.14□□□□□ -0.15
KNTC1-206ENST00000534995 MLLT3P42568 568 aaPredicted RBP14.13□□□□□ -0.15
KNTC1-206ENST00000534995 GPR153Q6NV75 609 aa14.13□□□□□ -0.15
KNTC1-206ENST00000534995 EVI5O60447 810 aa14.12□□□□□ -0.15
KNTC1-206ENST00000534995 ARSIQ5FYB1 569 aa14.12□□□□□ -0.15
KNTC1-206ENST00000534995 SPDYE16A6NNV3 312 aaPredicted RBP14.11□□□□□ -0.15
KNTC1-206ENST00000534995 ANO8Q9HCE9 1232 aaPredicted RBP14.08□□□□□ -0.16
KNTC1-206ENST00000534995 TBC1D12O60347 775 aa14.07□□□□□ -0.16
KNTC1-206ENST00000534995 NUDT7P0C024 238 aa14.07□□□□□ -0.16
KNTC1-206ENST00000534995 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
KNTC1-206ENST00000534995 SNPHO15079 494 aa14.05□□□□□ -0.16
KNTC1-206ENST00000534995 ZNF710Q8N1W2 664 aa14.04□□□□□ -0.16
KNTC1-206ENST00000534995 PTGER2P43116 358 aa14.03□□□□□ -0.16
KNTC1-206ENST00000534995 RIMBP2O15034 1052 aa14.02□□□□□ -0.17
KNTC1-206ENST00000534995 DDX12PQ92771 950 aa14.02□□□□□ -0.17
KNTC1-206ENST00000534995 HOXB1P14653 301 aaPredicted RBP14.01□□□□□ -0.17
KNTC1-206ENST00000534995 PRIM1P49642 420 aaKnown RBP14.01□□□□□ -0.17
KNTC1-206ENST00000534995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.01□□□□□ -0.17
KNTC1-206ENST00000534995 LCE2DQ5TA82 110 aaPredicted RBP14□□□□□ -0.17
KNTC1-206ENST00000534995 ST18O60284 1047 aa13.99□□□□□ -0.17
KNTC1-206ENST00000534995 BICRAQ9NZM4 1560 aa13.98□□□□□ -0.17
KNTC1-206ENST00000534995 GRXCR2A6NFK2 248 aa13.98□□□□□ -0.17
KNTC1-206ENST00000534995 OSBPP22059 807 aa13.96□□□□□ -0.17
KNTC1-206ENST00000534995 LHX6Q9UPM6 363 aa13.96□□□□□ -0.17
KNTC1-206ENST00000534995 LMOD2Q6P5Q4 547 aa13.95□□□□□ -0.18
KNTC1-206ENST00000534995 RBM26Q5T8P6 1007 aaKnown RBP13.94□□□□□ -0.18
KNTC1-206ENST00000534995 PCDHGA10Q9Y5H3 936 aa13.94□□□□□ -0.18
KNTC1-206ENST00000534995 ZNF316A6NFI3 1004 aaPredicted RBP13.92□□□□□ -0.18
KNTC1-206ENST00000534995 FAM163AQ96GL9 167 aaPredicted RBP13.92□□□□□ -0.18
KNTC1-206ENST00000534995 FOSBP53539 338 aa13.91□□□□□ -0.18
KNTC1-206ENST00000534995 PHF14O94880 888 aa13.9□□□□□ -0.18
KNTC1-206ENST00000534995 JPH4Q96JJ6 628 aa13.9□□□□□ -0.18
KNTC1-206ENST00000534995 SMYD5Q6GMV2 418 aa13.88□□□□□ -0.19
KNTC1-206ENST00000534995 MARVELD3Q96A59 401 aa13.88□□□□□ -0.19
KNTC1-206ENST00000534995 PRKCSHP14314 528 aaPredicted RBP13.87□□□□□ -0.19
KNTC1-206ENST00000534995 ZNF454Q8N9F8 522 aa13.86□□□□□ -0.19
KNTC1-206ENST00000534995 EPAS1Q99814 870 aa13.84□□□□□ -0.19
KNTC1-206ENST00000534995 EN1Q05925 392 aaPredicted RBP13.83□□□□□ -0.2
KNTC1-206ENST00000534995 TPRNQ4KMQ1 711 aa13.83□□□□□ -0.2
KNTC1-206ENST00000534995 TYW1BQ6NUM6 668 aa13.83□□□□□ -0.2
KNTC1-206ENST00000534995 ADAM33Q9BZ11 813 aa13.83□□□□□ -0.2
KNTC1-206ENST00000534995 POTEB3A0JP26 581 aa13.82□□□□□ -0.2
KNTC1-206ENST00000534995 GPR37O15354 613 aa13.82□□□□□ -0.2
KNTC1-206ENST00000534995 POTEBQ6S5H4 581 aa13.82□□□□□ -0.2
KNTC1-206ENST00000534995 RBM33Q96EV2 1170 aaKnown RBP13.82□□□□□ -0.2
KNTC1-206ENST00000534995 TULP1O00294 542 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms