RNA–Protein interactions for RNA: ENST00000534756.1

LINC01493-203, Transcript of long intergenic non-protein coding RNA 1493, humanhuman

TSL 3 BASIC

Gene LINC01493, Length 509 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01493-203ENST00000534756 SNPHO15079 494 aa12.06□□□□□ -0.48
LINC01493-203ENST00000534756 POTEGQ6S5H5 508 aa12.06□□□□□ -0.48
LINC01493-203ENST00000534756 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
LINC01493-203ENST00000534756 MARVELD3Q96A59 401 aa12.03□□□□□ -0.48
LINC01493-203ENST00000534756 KIF3CO14782 793 aa12.01□□□□□ -0.49
LINC01493-203ENST00000534756 RYDENQ9NUL5 291 aaKnown RBP12.01□□□□□ -0.49
LINC01493-203ENST00000534756 TMC2Q8TDI7 906 aa11.99□□□□□ -0.49
LINC01493-203ENST00000534756 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.49
LINC01493-203ENST00000534756 DOK7Q18PE1 504 aa11.95□□□□□ -0.5
LINC01493-203ENST00000534756 CADPS2Q86UW7 1296 aa11.94□□□□□ -0.5
LINC01493-203ENST00000534756 CFAP44Q96MT7 982 aa11.94□□□□□ -0.5
LINC01493-203ENST00000534756 PAXIP1Q6ZW49 1069 aaPredicted RBP11.93□□□□□ -0.5
LINC01493-203ENST00000534756 KHSRPQ92945 711 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC01493-203ENST00000534756 DSG2Q14126 1118 aa11.92□□□□□ -0.5
LINC01493-203ENST00000534756 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
LINC01493-203ENST00000534756 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.92□□□□□ -0.5
LINC01493-203ENST00000534756 NCKAP5LQ9HCH0 1330 aa11.91□□□□□ -0.5
LINC01493-203ENST00000534756 SPRYD3Q8NCJ5 442 aa11.91□□□□□ -0.5
LINC01493-203ENST00000534756 ARSIQ5FYB1 569 aa11.9□□□□□ -0.5
LINC01493-203ENST00000534756 POTEB3A0JP26 581 aa11.89□□□□□ -0.51
LINC01493-203ENST00000534756 EMP3P54852 163 aa11.89□□□□□ -0.51
LINC01493-203ENST00000534756 POTEBQ6S5H4 581 aa11.89□□□□□ -0.51
LINC01493-203ENST00000534756 PLPP6Q8IY26 295 aa11.89□□□□□ -0.51
LINC01493-203ENST00000534756 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
LINC01493-203ENST00000534756 HOXB1P14653 301 aaPredicted RBP11.87□□□□□ -0.51
LINC01493-203ENST00000534756 FOXK1P85037 733 aa11.87□□□□□ -0.51
LINC01493-203ENST00000534756 CRISPLD2Q9H0B8 497 aa11.87□□□□□ -0.51
LINC01493-203ENST00000534756 FAM205CA6NFA0 338 aa11.86□□□□□ -0.51
LINC01493-203ENST00000534756 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
LINC01493-203ENST00000534756 RIMBP2O15034 1052 aa11.85□□□□□ -0.51
LINC01493-203ENST00000534756 PDE4AP27815 886 aa11.83□□□□□ -0.52
LINC01493-203ENST00000534756 CDAN1Q8IWY9 1227 aa11.83□□□□□ -0.52
LINC01493-203ENST00000534756 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
LINC01493-203ENST00000534756 PCDHGA4Q9Y5G9 962 aa11.81□□□□□ -0.52
LINC01493-203ENST00000534756 PPP1R15BQ5SWA1 713 aa11.8□□□□□ -0.52
LINC01493-203ENST00000534756 ZSWIM6Q9HCJ5 1215 aa11.8□□□□□ -0.52
LINC01493-203ENST00000534756 NUDT7P0C024 238 aa11.79□□□□□ -0.52
LINC01493-203ENST00000534756 ERBB3P21860 1342 aa11.79□□□□□ -0.52
LINC01493-203ENST00000534756 SLC34A2O95436 690 aa11.78□□□□□ -0.52
LINC01493-203ENST00000534756 UPF1Q92900 1129 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC01493-203ENST00000534756 DDX27Q96GQ7 796 aaKnown RBP11.76□□□□□ -0.53
LINC01493-203ENST00000534756 VARS2Q5ST30 1063 aaKnown RBP11.75□□□□□ -0.53
LINC01493-203ENST00000534756 MFSD10Q14728 455 aa11.73□□□□□ -0.53
LINC01493-203ENST00000534756 PTCD2Q8WV60 388 aaKnown RBP11.73□□□□□ -0.53
LINC01493-203ENST00000534756 TSHZ2Q9NRE2 1034 aa11.72□□□□□ -0.53
LINC01493-203ENST00000534756 LHX6Q9UPM6 363 aa11.7□□□□□ -0.54
LINC01493-203ENST00000534756 ZNF316A6NFI3 1004 aaPredicted RBP11.69□□□□□ -0.54
LINC01493-203ENST00000534756 OXER1Q8TDS5 423 aa11.69□□□□□ -0.54
LINC01493-203ENST00000534756 KDM4FA0A1W2PPD8 638 aa11.68□□□□□ -0.54
LINC01493-203ENST00000534756 EMILIN3Q9NT22 766 aa11.68□□□□□ -0.54
LINC01493-203ENST00000534756 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
LINC01493-203ENST00000534756 KRTAP3-3Q9BYR6 98 aa11.65□□□□□ -0.54
LINC01493-203ENST00000534756 KRTAP3-2Q9BYR7 98 aa11.65□□□□□ -0.54
LINC01493-203ENST00000534756 TBC1D12O60347 775 aa11.64□□□□□ -0.55
LINC01493-203ENST00000534756 ZNF687Q8N1G0 1237 aa11.61□□□□□ -0.55
LINC01493-203ENST00000534756 MAP3K9P80192 1104 aa11.6□□□□□ -0.55
LINC01493-203ENST00000534756 EVI5O60447 810 aa11.58□□□□□ -0.56
LINC01493-203ENST00000534756 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
LINC01493-203ENST00000534756 CAMK2BQ13554 666 aa11.58□□□□□ -0.56
LINC01493-203ENST00000534756 AXIN2Q9Y2T1 843 aa11.58□□□□□ -0.56
LINC01493-203ENST00000534756 POTEEQ6S8J3 1075 aa11.57□□□□□ -0.56
LINC01493-203ENST00000534756 DPYSL4O14531 572 aa11.56□□□□□ -0.56
LINC01493-203ENST00000534756 WDR70Q9NW82 654 aa11.55□□□□□ -0.56
LINC01493-203ENST00000534756 SPNS2Q8IVW8 549 aa11.52□□□□□ -0.57
LINC01493-203ENST00000534756 ANO8Q9HCE9 1232 aaPredicted RBP11.52□□□□□ -0.57
LINC01493-203ENST00000534756 E2F4Q16254 413 aa11.51□□□□□ -0.57
LINC01493-203ENST00000534756 ZNF454Q8N9F8 522 aa11.51□□□□□ -0.57
LINC01493-203ENST00000534756 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
LINC01493-203ENST00000534756 PSEN2P49810 448 aa11.48□□□□□ -0.57
LINC01493-203ENST00000534756 HAP1P54257 671 aaPredicted RBP11.47□□□□□ -0.57
LINC01493-203ENST00000534756 PPP4R3BQ5MIZ7 849 aa11.47□□□□□ -0.57
LINC01493-203ENST00000534756 PSDA5PKW4 1024 aaPredicted RBP11.46□□□□□ -0.57
LINC01493-203ENST00000534756 FOSBP53539 338 aa11.46□□□□□ -0.57
LINC01493-203ENST00000534756 DMRTA1Q5VZB9 504 aa11.45□□□□□ -0.58
LINC01493-203ENST00000534756 ARHGAP33O14559 1287 aa11.43□□□□□ -0.58
LINC01493-203ENST00000534756 LSM11P83369 360 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC01493-203ENST00000534756 DDX12PQ92771 950 aa11.43□□□□□ -0.58
LINC01493-203ENST00000534756 KCNK17Q96T54 332 aa11.43□□□□□ -0.58
LINC01493-203ENST00000534756 PCDHGA10Q9Y5H3 936 aa11.43□□□□□ -0.58
LINC01493-203ENST00000534756 MMRN1Q13201 1228 aa11.42□□□□□ -0.58
LINC01493-203ENST00000534756 ADAM33Q9BZ11 813 aa11.42□□□□□ -0.58
LINC01493-203ENST00000534756 JPH4Q96JJ6 628 aa11.41□□□□□ -0.58
LINC01493-203ENST00000534756 PBX2P40425 430 aa11.4□□□□□ -0.58
LINC01493-203ENST00000534756 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
LINC01493-203ENST00000534756 KCNV2Q8TDN2 545 aa11.38□□□□□ -0.59
LINC01493-203ENST00000534756 PDIA6Q15084 440 aa11.37□□□□□ -0.59
LINC01493-203ENST00000534756 BCL2L12Q9HB09 334 aa11.37□□□□□ -0.59
LINC01493-203ENST00000534756 KDM2AQ9Y2K7 1162 aa11.37□□□□□ -0.59
LINC01493-203ENST00000534756 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
LINC01493-203ENST00000534756 PHF14O94880 888 aa11.35□□□□□ -0.59
LINC01493-203ENST00000534756 GRXCR2A6NFK2 248 aa11.34□□□□□ -0.59
LINC01493-203ENST00000534756 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
LINC01493-203ENST00000534756 PTPREP23469 700 aa11.33□□□□□ -0.6
LINC01493-203ENST00000534756 PTGER2P43116 358 aa11.33□□□□□ -0.6
LINC01493-203ENST00000534756 TYW1BQ6NUM6 668 aa11.33□□□□□ -0.6
LINC01493-203ENST00000534756 ADGRD1Q6QNK2 874 aa11.33□□□□□ -0.6
LINC01493-203ENST00000534756 SPDYE16A6NNV3 312 aaPredicted RBP11.32□□□□□ -0.6
LINC01493-203ENST00000534756 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
LINC01493-203ENST00000534756 COL9A1P20849 921 aa11.31□□□□□ -0.6
LINC01493-203ENST00000534756 NBR1Q14596 966 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms