RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 OTUD5Q96G74 571 aa6.92□□□□□ -1.3
ME3-211ENST00000534638 PHF8Q9UPP1 1060 aa6.92□□□□□ -1.3
ME3-211ENST00000534638 DPY19L2Q6NUT2 758 aa6.91□□□□□ -1.3
ME3-211ENST00000534638 PLSCR2Q9NRY7 297 aa6.91□□□□□ -1.3
ME3-211ENST00000534638 NLRP6P59044 892 aa6.9□□□□□ -1.3
ME3-211ENST00000534638 L3MBTL3Q96JM7 780 aaPredicted RBP6.9□□□□□ -1.3
ME3-211ENST00000534638 SCUBE2Q9NQ36 999 aa6.9□□□□□ -1.3
ME3-211ENST00000534638 MS4A4AQ96JQ5 239 aa6.88□□□□□ -1.31
ME3-211ENST00000534638 MFRPQ9BY79 579 aa6.88□□□□□ -1.31
ME3-211ENST00000534638 LMOD2Q6P5Q4 547 aa6.87□□□□□ -1.31
ME3-211ENST00000534638 FBXO22Q8NEZ5 403 aa6.87□□□□□ -1.31
ME3-211ENST00000534638 G3V3G9 751 aa6.86□□□□□ -1.31
ME3-211ENST00000534638 BRPF1P55201 1214 aaPredicted RBP6.86□□□□□ -1.31
ME3-211ENST00000534638 BOLA1Q9Y3E2 137 aa6.86□□□□□ -1.31
ME3-211ENST00000534638 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.84□□□□□ -1.31
ME3-211ENST00000534638 C3orf67Q6ZVT6 689 aa6.83□□□□□ -1.32
ME3-211ENST00000534638 SLAIN1Q8ND83 568 aa6.83□□□□□ -1.32
ME3-211ENST00000534638 PODXL2Q9NZ53 605 aa6.83□□□□□ -1.32
ME3-211ENST00000534638 KCNV2Q8TDN2 545 aa6.82□□□□□ -1.32
ME3-211ENST00000534638 TMEM121BQ9BXQ6 578 aaPredicted RBP6.82□□□□□ -1.32
ME3-211ENST00000534638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.81□□□□□ -1.32
ME3-211ENST00000534638 P3H3Q8IVL6 736 aa6.81□□□□□ -1.32
ME3-211ENST00000534638 MICALL2Q8IY33 904 aa6.81□□□□□ -1.32
ME3-211ENST00000534638 NEUROD2Q15784 382 aa6.8□□□□□ -1.32
ME3-211ENST00000534638 PPP1R37O75864 691 aa6.79□□□□□ -1.32
ME3-211ENST00000534638 RYDENQ9NUL5 291 aaKnown RBP6.78□□□□□ -1.32
ME3-211ENST00000534638 CADPS2Q86UW7 1296 aa6.77□□□□□ -1.33
ME3-211ENST00000534638 PCDH10Q9P2E7 1040 aa6.77□□□□□ -1.33
ME3-211ENST00000534638 UBTFP17480 764 aaKnown RBP6.75□□□□□ -1.33
ME3-211ENST00000534638 TMEM92Q6UXU6 159 aa6.74□□□□□ -1.33
ME3-211ENST00000534638 SLC24A3Q9HC58 644 aa6.74□□□□□ -1.33
ME3-211ENST00000534638 RANGAP1P46060 587 aaPredicted RBP6.73□□□□□ -1.33
ME3-211ENST00000534638 ZC3H15Q8WU90 426 aaKnown RBP6.73□□□□□ -1.33
ME3-211ENST00000534638 FAM163AQ96GL9 167 aaPredicted RBP6.73□□□□□ -1.33
ME3-211ENST00000534638 WDR70Q9NW82 654 aa6.73□□□□□ -1.33
ME3-211ENST00000534638 SNPHO15079 494 aa6.71□□□□□ -1.34
ME3-211ENST00000534638 POTEMA6NI47 508 aa6.7□□□□□ -1.34
ME3-211ENST00000534638 C2orf72A6NCS6 295 aa6.68□□□□□ -1.34
ME3-211ENST00000534638 TRIM26Q12899 539 aaPredicted RBP6.68□□□□□ -1.34
ME3-211ENST00000534638 TMC2Q8TDI7 906 aa6.68□□□□□ -1.34
ME3-211ENST00000534638 KIF3CO14782 793 aa6.67□□□□□ -1.34
ME3-211ENST00000534638 POTEGQ6S5H5 508 aa6.67□□□□□ -1.34
ME3-211ENST00000534638 ST18O60284 1047 aa6.66□□□□□ -1.34
ME3-211ENST00000534638 LCE2DQ5TA82 110 aaPredicted RBP6.66□□□□□ -1.34
ME3-211ENST00000534638 SEMA3EO15041 775 aa6.65□□□□□ -1.34
ME3-211ENST00000534638 HOXB3P14651 431 aaPredicted RBP6.65□□□□□ -1.34
ME3-211ENST00000534638 DOK7Q18PE1 504 aa6.64□□□□□ -1.35
ME3-211ENST00000534638 ARID3AQ99856 593 aa6.64□□□□□ -1.35
ME3-211ENST00000534638 ZNF710Q8N1W2 664 aa6.63□□□□□ -1.35
ME3-211ENST00000534638 GPHNQ9NQX3 736 aaPredicted RBP6.63□□□□□ -1.35
ME3-211ENST00000534638 RIMBP2O15034 1052 aa6.61□□□□□ -1.35
ME3-211ENST00000534638 PDE4AP27815 886 aa6.61□□□□□ -1.35
ME3-211ENST00000534638 CRISPLD2Q9H0B8 497 aa6.61□□□□□ -1.35
ME3-211ENST00000534638 GPBP1L1Q9HC44 474 aaPredicted RBP6.61□□□□□ -1.35
ME3-211ENST00000534638 NCKAP5LQ9HCH0 1330 aa6.6□□□□□ -1.35
ME3-211ENST00000534638 TESPA1A2RU30 521 aaPredicted RBP6.6□□□□□ -1.35
ME3-211ENST00000534638 FOXK1P85037 733 aa6.6□□□□□ -1.35
ME3-211ENST00000534638 DSG2Q14126 1118 aa6.6□□□□□ -1.35
ME3-211ENST00000534638 PLPP6Q8IY26 295 aa6.6□□□□□ -1.35
ME3-211ENST00000534638 HRCP23327 699 aa6.59□□□□□ -1.35
ME3-211ENST00000534638 ARHGEF1Q92888 912 aaKnown RBP6.59□□□□□ -1.35
ME3-211ENST00000534638 MARVELD3Q96A59 401 aa6.59□□□□□ -1.35
ME3-211ENST00000534638 LARP6Q9BRS8 491 aaKnown RBP6.59□□□□□ -1.35
ME3-211ENST00000534638 ZMYND15Q9H091 742 aa6.59□□□□□ -1.35
ME3-211ENST00000534638 ZMYND10O75800 440 aa6.58□□□□□ -1.36
ME3-211ENST00000534638 HOXB1P14653 301 aaPredicted RBP6.58□□□□□ -1.36
ME3-211ENST00000534638 NPM2Q86SE8 214 aaKnown RBP6.58□□□□□ -1.36
ME3-211ENST00000534638 ZSWIM6Q9HCJ5 1215 aa6.58□□□□□ -1.36
ME3-211ENST00000534638 E2F4Q16254 413 aa6.57□□□□□ -1.36
ME3-211ENST00000534638 PPP1R15BQ5SWA1 713 aa6.57□□□□□ -1.36
ME3-211ENST00000534638 IL27Q8NEV9 243 aa6.57□□□□□ -1.36
ME3-211ENST00000534638 RSPH6AQ9H0K4 717 aa6.57□□□□□ -1.36
ME3-211ENST00000534638 SLC34A2O95436 690 aa6.56□□□□□ -1.36
ME3-211ENST00000534638 EMP3P54852 163 aa6.56□□□□□ -1.36
ME3-211ENST00000534638 ARSIQ5FYB1 569 aa6.56□□□□□ -1.36
ME3-211ENST00000534638 GPR153Q6NV75 609 aa6.56□□□□□ -1.36
ME3-211ENST00000534638 DDX27Q96GQ7 796 aaKnown RBP6.56□□□□□ -1.36
ME3-211ENST00000534638 MFSD10Q14728 455 aa6.55□□□□□ -1.36
ME3-211ENST00000534638 C1orf115Q9H7X2 142 aa6.55□□□□□ -1.36
ME3-211ENST00000534638 KHSRPQ92945 711 aaKnown RBP eCLIP6.54□□□□□ -1.36
ME3-211ENST00000534638 PCDHGA4Q9Y5G9 962 aa6.54□□□□□ -1.36
ME3-211ENST00000534638 FAM205CA6NFA0 338 aa6.53□□□□□ -1.36
ME3-211ENST00000534638 ARID3CA6NKF2 412 aa6.53□□□□□ -1.36
ME3-211ENST00000534638 BARGINQ6ZT62 677 aa6.53□□□□□ -1.36
ME3-211ENST00000534638 PTCD2Q8WV60 388 aaKnown RBP6.52□□□□□ -1.37
ME3-211ENST00000534638 ERBB3P21860 1342 aa6.51□□□□□ -1.37
ME3-211ENST00000534638 NUDT7P0C024 238 aa6.51□□□□□ -1.37
ME3-211ENST00000534638 UPF1Q92900 1129 aaKnown RBP eCLIP6.51□□□□□ -1.37
ME3-211ENST00000534638 HS3ST6Q96QI5 342 aa6.51□□□□□ -1.37
ME3-211ENST00000534638 KDM4CQ9H3R0 1056 aa6.51□□□□□ -1.37
ME3-211ENST00000534638 POTEB3A0JP26 581 aa6.5□□□□□ -1.37
ME3-211ENST00000534638 TBC1D12O60347 775 aa6.5□□□□□ -1.37
ME3-211ENST00000534638 POTEBQ6S5H4 581 aa6.5□□□□□ -1.37
ME3-211ENST00000534638 OXER1Q8TDS5 423 aa6.5□□□□□ -1.37
ME3-211ENST00000534638 CDAN1Q8IWY9 1227 aa6.49□□□□□ -1.37
ME3-211ENST00000534638 AK7Q96M32 723 aa6.49□□□□□ -1.37
ME3-211ENST00000534638 ZNF316A6NFI3 1004 aaPredicted RBP6.48□□□□□ -1.37
ME3-211ENST00000534638 VARS2Q5ST30 1063 aaKnown RBP6.48□□□□□ -1.37
ME3-211ENST00000534638 RBM26Q5T8P6 1007 aaKnown RBP6.48□□□□□ -1.37
ME3-211ENST00000534638 SMYD5Q6GMV2 418 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms