RNA–Protein interactions for RNA: ENST00000534603.5

GATD1-216, Transcript of glutamine amidotransferase like class 1 domain containing 1, humanhuman

TSL 1 (best)

Gene GATD1, Length 863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATD1-216ENST00000534603 KANK4Q5T7N3 995 aaPredicted RBP25.91■■□□□ 1.74
GATD1-216ENST00000534603 NCOA2Q15596 1464 aa25.89■■□□□ 1.73
GATD1-216ENST00000534603 CCNB3Q8WWL7 1395 aa25.88■■□□□ 1.73
GATD1-216ENST00000534603 PHLDB1Q86UU1 1377 aa25.87■■□□□ 1.73
GATD1-216ENST00000534603 GPATCH8Q9UKJ3 1502 aaKnown RBP25.87■■□□□ 1.73
GATD1-216ENST00000534603 COL17A1Q9UMD9 1497 aaPredicted RBP25.85■■□□□ 1.73
GATD1-216ENST00000534603 AKNAQ7Z591 1439 aa25.85■■□□□ 1.73
GATD1-216ENST00000534603 EFCAB2Q5VUJ9 269 aa25.83■■□□□ 1.73
GATD1-216ENST00000534603 ADGRL1O94910 1474 aa25.81■■□□□ 1.72
GATD1-216ENST00000534603 RICTORQ6R327 1708 aa25.8■■□□□ 1.72
GATD1-216ENST00000534603 SAMD9LQ8IVG5 1584 aa25.78■■□□□ 1.72
GATD1-216ENST00000534603 ABCC1P33527 1531 aa25.77■■□□□ 1.72
GATD1-216ENST00000534603 FRMPD1Q5SYB0 1578 aa25.77■■□□□ 1.72
GATD1-216ENST00000534603 CFDP1Q9UEE9 299 aaPredicted RBP25.76■■□□□ 1.71
GATD1-216ENST00000534603 DENND4BO75064 1496 aaPredicted RBP25.76■■□□□ 1.71
GATD1-216ENST00000534603 ZNF777Q9ULD5 760 aaPredicted RBP25.75■■□□□ 1.71
GATD1-216ENST00000534603 SCAPERQ9BY12 1400 aa25.74■■□□□ 1.71
GATD1-216ENST00000534603 RAPGEF3O95398 923 aa25.71■■□□□ 1.71
GATD1-216ENST00000534603 SYCP2Q9BX26 1530 aa25.7■■□□□ 1.7
GATD1-216ENST00000534603 MYOM3Q5VTT5 1437 aa25.7■■□□□ 1.7
GATD1-216ENST00000534603 POGZQ7Z3K3 1410 aa25.7■■□□□ 1.7
GATD1-216ENST00000534603 PLEKHH2Q8IVE3 1493 aa25.67■■□□□ 1.7
GATD1-216ENST00000534603 ARHGEF12Q9NZN5 1544 aa25.67■■□□□ 1.7
GATD1-216ENST00000534603 CAMSAP2Q08AD1 1489 aa25.66■■□□□ 1.7
GATD1-216ENST00000534603 ZMYM4Q5VZL5 1548 aa25.66■■□□□ 1.7
GATD1-216ENST00000534603 ZNF518AQ6AHZ1 1483 aa25.66■■□□□ 1.7
GATD1-216ENST00000534603 PPARGC1BQ86YN6 1023 aaKnown RBP25.65■■□□□ 1.7
GATD1-216ENST00000534603 MIA2Q96PC5 1412 aa25.63■■□□□ 1.69
GATD1-216ENST00000534603 ZNF644Q9H582 1327 aaPredicted RBP25.63■■□□□ 1.69
GATD1-216ENST00000534603 KDM5CP41229 1560 aa25.62■■□□□ 1.69
GATD1-216ENST00000534603 KIAA1107Q9UPP5 1409 aa25.62■■□□□ 1.69
GATD1-216ENST00000534603 TRAPPC8Q9Y2L5 1435 aa25.62■■□□□ 1.69
GATD1-216ENST00000534603 PTPN23Q9H3S7 1636 aa25.6■■□□□ 1.69
GATD1-216ENST00000534603 HECW2Q9P2P5 1572 aa25.6■■□□□ 1.69
GATD1-216ENST00000534603 ARHGEF40Q8TER5 1519 aa25.58■■□□□ 1.69
GATD1-216ENST00000534603 HNRNPMP52272 730 aaKnown RBP eCLIP25.58■■□□□ 1.69
GATD1-216ENST00000534603 ZFYVE16Q7Z3T8 1539 aa25.58■■□□□ 1.68
GATD1-216ENST00000534603 FGD6Q6ZV73 1430 aa25.57■■□□□ 1.68
GATD1-216ENST00000534603 AFAP1Q8N556 730 aa25.57■■□□□ 1.68
GATD1-216ENST00000534603 MAGI2Q86UL8 1455 aa25.55■■□□□ 1.68
GATD1-216ENST00000534603 MBD5Q9P267 1494 aa25.54■■□□□ 1.68
GATD1-216ENST00000534603 ARHGEF5Q12774 1597 aa25.53■■□□□ 1.68
GATD1-216ENST00000534603 KIDINS220Q9ULH0 1771 aa25.52■■□□□ 1.68
GATD1-216ENST00000534603 MYT1LQ9UL68 1186 aa25.52■■□□□ 1.68
GATD1-216ENST00000534603 CCDC141Q6ZP82 1450 aa25.52■■□□□ 1.68
GATD1-216ENST00000534603 YEATS2Q9ULM3 1422 aa25.51■■□□□ 1.67
GATD1-216ENST00000534603 TCOF1Q13428 1488 aaKnown RBP25.5■■□□□ 1.67
GATD1-216ENST00000534603 MLH3Q9UHC1 1453 aa25.5■■□□□ 1.67
GATD1-216ENST00000534603 INO80Q9ULG1 1556 aaPredicted RBP25.5■■□□□ 1.67
GATD1-216ENST00000534603 ABCA6Q8N139 1617 aa25.49■■□□□ 1.67
GATD1-216ENST00000534603 ATP7AQ04656 1500 aa25.48■■□□□ 1.67
GATD1-216ENST00000534603 CROCC2H7BZ55 1655 aa25.48■■□□□ 1.67
GATD1-216ENST00000534603 DIP2CQ9Y2E4 1556 aa25.48■■□□□ 1.67
GATD1-216ENST00000534603 SPAG9O60271 1321 aaKnown RBP25.46■■□□□ 1.67
GATD1-216ENST00000534603 DNMT1P26358 1616 aaKnown RBP25.45■■□□□ 1.66
GATD1-216ENST00000534603 RSPH4AQ5TD94 716 aa25.44■■□□□ 1.66
GATD1-216ENST00000534603 SIGLEC1Q9BZZ2 1709 aa25.42■■□□□ 1.66
GATD1-216ENST00000534603 ATP10AO60312 1499 aa25.41■■□□□ 1.66
GATD1-216ENST00000534603 FAM50AQ14320 339 aaKnown RBP25.41■■□□□ 1.66
GATD1-216ENST00000534603 MAST1Q9Y2H9 1570 aa25.4■■□□□ 1.66
GATD1-216ENST00000534603 C9orf84Q5VXU9 1444 aa25.4■■□□□ 1.66
GATD1-216ENST00000534603 ADGBQ8N7X0 1667 aa25.4■■□□□ 1.66
GATD1-216ENST00000534603 RTEL1-TNFRSF6BF6WH68 1400 aa25.37■■□□□ 1.65
GATD1-216ENST00000534603 DAPK1P53355 1430 aa25.37■■□□□ 1.65
GATD1-216ENST00000534603 REREQ9P2R6 1566 aa25.37■■□□□ 1.65
GATD1-216ENST00000534603 TSPY4P0CV99 314 aa25.37■■□□□ 1.65
GATD1-216ENST00000534603 TSPY10P0CW01 314 aa25.37■■□□□ 1.65
GATD1-216ENST00000534603 ABCC5O15440 1437 aa25.36■■□□□ 1.65
GATD1-216ENST00000534603 SHANK2Q9UPX8 1470 aa25.35■■□□□ 1.65
GATD1-216ENST00000534603 ARID4BQ4LE39 1312 aaPredicted RBP25.34■■□□□ 1.65
GATD1-216ENST00000534603 BCORL1Q5H9F3 1711 aa25.32■■□□□ 1.64
GATD1-216ENST00000534603 RRBP1Q9P2E9 1410 aaKnown RBP25.32■■□□□ 1.64
GATD1-216ENST00000534603 PLXNC1O60486 1568 aa25.31■■□□□ 1.64
GATD1-216ENST00000534603 A2MP01023 1474 aa25.3■■□□□ 1.64
GATD1-216ENST00000534603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.28■■□□□ 1.645e-8■■■■■ 46.5
GATD1-216ENST00000534603 AGLP35573 1532 aa25.27■■□□□ 1.64
GATD1-216ENST00000534603 ADAMTSL3P82987 1691 aa25.25■■□□□ 1.63
GATD1-216ENST00000534603 FER1L4A9Z1Z3 1794 aa25.23■■□□□ 1.63
GATD1-216ENST00000534603 CHIC2Q9UKJ5 165 aa25.22■■□□□ 1.63
GATD1-216ENST00000534603 ITGAEP38570 1179 aa25.21■■□□□ 1.63
GATD1-216ENST00000534603 MADDQ8WXG6 1647 aa25.21■■□□□ 1.63
GATD1-216ENST00000534603 MLECQ14165 292 aa25.2■■□□□ 1.62
GATD1-216ENST00000534603 ADGRL2O95490 1459 aa25.2■■□□□ 1.62
GATD1-216ENST00000534603 DHX29Q7Z478 1369 aaKnown RBP25.19■■□□□ 1.62
GATD1-216ENST00000534603 ANKRD30AQ9BXX3 1397 aa25.19■■□□□ 1.62
GATD1-216ENST00000534603 DUOX2Q9NRD8 1548 aa25.19■■□□□ 1.62
GATD1-216ENST00000534603 KDM4FA0A1W2PPD8 638 aa25.19■■□□□ 1.62
GATD1-216ENST00000534603 PTPRKQ15262 1439 aa25.19■■□□□ 1.62
GATD1-216ENST00000534603 KIF15Q9NS87 1388 aa25.18■■□□□ 1.62
GATD1-216ENST00000534603 RIMS1Q86UR5 1692 aaKnown RBP25.18■■□□□ 1.62
GATD1-216ENST00000534603 EIF2AK4Q9P2K8 1649 aaKnown RBP25.17■■□□□ 1.62
GATD1-216ENST00000534603 RRP7BPQ9NSQ0 103 aa25.16■■□□□ 1.62
GATD1-216ENST00000534603 NCOA1Q15788 1441 aa25.15■■□□□ 1.62
GATD1-216ENST00000534603 ERBINQ96RT1 1412 aa25.11■■□□□ 1.61
GATD1-216ENST00000534603 RNF17Q9BXT8 1623 aaKnown RBP25.1■■□□□ 1.61
GATD1-216ENST00000534603 ROCK1Q13464 1354 aa25.09■■□□□ 1.61
GATD1-216ENST00000534603 KIF3BO15066 747 aa25.09■■□□□ 1.61
GATD1-216ENST00000534603 CLTCQ00610 1675 aaKnown RBP25.07■■□□□ 1.6
GATD1-216ENST00000534603 GGT6Q6P531 493 aa25.07■■□□□ 1.6
GATD1-216ENST00000534603 GCC2Q8IWJ2 1684 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms