RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 FAM50AQ14320 339 aaKnown RBP25.63■■□□□ 1.69
VPS51-216ENST00000534591 PLEKHD1A6NEE1 506 aa25.63■■□□□ 1.69
VPS51-216ENST00000534591 KIF14Q15058 1648 aa25.62■■□□□ 1.69
VPS51-216ENST00000534591 MIA2Q96PC5 1412 aa25.61■■□□□ 1.69
VPS51-216ENST00000534591 ZEB1P37275 1124 aaPredicted RBP25.61■■□□□ 1.69
VPS51-216ENST00000534591 TCOF1Q13428 1488 aaKnown RBP25.57■■□□□ 1.68
VPS51-216ENST00000534591 PTPN23Q9H3S7 1636 aa25.56■■□□□ 1.68
VPS51-216ENST00000534591 MYO5CQ9NQX4 1742 aa25.55■■□□□ 1.68
VPS51-216ENST00000534591 ARAP3Q8WWN8 1544 aa25.53■■□□□ 1.68
VPS51-216ENST00000534591 CCER1Q8TC90 406 aaPredicted RBP25.53■■□□□ 1.68
VPS51-216ENST00000534591 ITGAEP38570 1179 aa25.53■■□□□ 1.68
VPS51-216ENST00000534591 FRMPD1Q5SYB0 1578 aa25.52■■□□□ 1.68
VPS51-216ENST00000534591 NEO1Q92859 1461 aa25.51■■□□□ 1.67
VPS51-216ENST00000534591 CFAP74Q9C0B2 1584 aa25.5■■□□□ 1.67
VPS51-216ENST00000534591 ITSN2Q9NZM3 1697 aa25.49■■□□□ 1.67
VPS51-216ENST00000534591 AEBP2Q6ZN18 517 aaPredicted RBP25.47■■□□□ 1.67
VPS51-216ENST00000534591 RICTORQ6R327 1708 aa25.47■■□□□ 1.67
VPS51-216ENST00000534591 FANCAO15360 1455 aa25.47■■□□□ 1.67
VPS51-216ENST00000534591 GPATCH8Q9UKJ3 1502 aaKnown RBP25.45■■□□□ 1.66
VPS51-216ENST00000534591 CDC42BPBQ9Y5S2 1711 aa25.44■■□□□ 1.66
VPS51-216ENST00000534591 SETD5Q9C0A6 1442 aa25.42■■□□□ 1.66
VPS51-216ENST00000534591 CDC42BPAQ5VT25 1732 aa25.41■■□□□ 1.66
VPS51-216ENST00000534591 PLCH2O75038 1416 aa25.4■■□□□ 1.66
VPS51-216ENST00000534591 AKNAQ7Z591 1439 aa25.4■■□□□ 1.66
VPS51-216ENST00000534591 PREX2Q70Z35 1606 aa25.39■■□□□ 1.66
VPS51-216ENST00000534591 RAPGEF3O95398 923 aa25.39■■□□□ 1.66
VPS51-216ENST00000534591 CFDP1Q9UEE9 299 aaPredicted RBP25.39■■□□□ 1.66
VPS51-216ENST00000534591 PTPRKQ15262 1439 aa25.37■■□□□ 1.65
VPS51-216ENST00000534591 RAB3GAP2Q9H2M9 1393 aa25.35■■□□□ 1.65
VPS51-216ENST00000534591 KDM4FA0A1W2PPD8 638 aa25.34■■□□□ 1.65
VPS51-216ENST00000534591 ARHGAP5Q13017 1502 aa25.34■■□□□ 1.65
VPS51-216ENST00000534591 ADGRL1O94910 1474 aa25.34■■□□□ 1.65
VPS51-216ENST00000534591 DENND4BO75064 1496 aaPredicted RBP25.33■■□□□ 1.65
VPS51-216ENST00000534591 CAMSAP2Q08AD1 1489 aa25.32■■□□□ 1.64
VPS51-216ENST00000534591 HFM1A2PYH4 1435 aa25.32■■□□□ 1.64
VPS51-216ENST00000534591 DNMT1P26358 1616 aaKnown RBP25.31■■□□□ 1.64
VPS51-216ENST00000534591 DAPK1P53355 1430 aa25.29■■□□□ 1.64
VPS51-216ENST00000534591 ZMYM4Q5VZL5 1548 aa25.29■■□□□ 1.64
VPS51-216ENST00000534591 ARHGEF40Q8TER5 1519 aa25.29■■□□□ 1.64
VPS51-216ENST00000534591 ZNF644Q9H582 1327 aaPredicted RBP25.29■■□□□ 1.64
VPS51-216ENST00000534591 CLSPNQ9HAW4 1339 aa25.29■■□□□ 1.64
VPS51-216ENST00000534591 DHX57Q6P158 1386 aaKnown RBP25.28■■□□□ 1.64
VPS51-216ENST00000534591 SIGLEC1Q9BZZ2 1709 aa25.27■■□□□ 1.64
VPS51-216ENST00000534591 ABCC5O15440 1437 aa25.26■■□□□ 1.63
VPS51-216ENST00000534591 POGZQ7Z3K3 1410 aa25.26■■□□□ 1.63
VPS51-216ENST00000534591 SCAPERQ9BY12 1400 aa25.26■■□□□ 1.63
VPS51-216ENST00000534591 ROCK1Q13464 1354 aa25.25■■□□□ 1.63
VPS51-216ENST00000534591 NAIPQ13075 1403 aa25.25■■□□□ 1.63
VPS51-216ENST00000534591 ZNF777Q9ULD5 760 aaPredicted RBP25.23■■□□□ 1.63
VPS51-216ENST00000534591 ABCC1P33527 1531 aa25.23■■□□□ 1.63
VPS51-216ENST00000534591 EFCAB2Q5VUJ9 269 aa25.22■■□□□ 1.63
VPS51-216ENST00000534591 SAMD9LQ8IVG5 1584 aa25.21■■□□□ 1.63
VPS51-216ENST00000534591 YEATS2Q9ULM3 1422 aa25.2■■□□□ 1.62
VPS51-216ENST00000534591 GCC2Q8IWJ2 1684 aa25.2■■□□□ 1.62
VPS51-216ENST00000534591 ZFYVE16Q7Z3T8 1539 aa25.2■■□□□ 1.62
VPS51-216ENST00000534591 ARHGEF12Q9NZN5 1544 aa25.19■■□□□ 1.62
VPS51-216ENST00000534591 KDM5CP41229 1560 aa25.18■■□□□ 1.62
VPS51-216ENST00000534591 CHIC2Q9UKJ5 165 aa25.18■■□□□ 1.62
VPS51-216ENST00000534591 CROCC2H7BZ55 1655 aa25.17■■□□□ 1.62
VPS51-216ENST00000534591 ARHGEF5Q12774 1597 aa25.16■■□□□ 1.62
VPS51-216ENST00000534591 BCORL1Q5H9F3 1711 aa25.16■■□□□ 1.62
VPS51-216ENST00000534591 ACIN1Q9UKV3 1341 aaKnown RBP25.16■■□□□ 1.62
VPS51-216ENST00000534591 PLEKHH2Q8IVE3 1493 aa25.15■■□□□ 1.62
VPS51-216ENST00000534591 SHANK2Q9UPX8 1470 aa25.15■■□□□ 1.62
VPS51-216ENST00000534591 RSPH4AQ5TD94 716 aa25.15■■□□□ 1.62
VPS51-216ENST00000534591 ZNF518AQ6AHZ1 1483 aa25.14■■□□□ 1.62
VPS51-216ENST00000534591 RRP7BPQ9NSQ0 103 aa25.14■■□□□ 1.62
VPS51-216ENST00000534591 ADAMTSL3P82987 1691 aa25.14■■□□□ 1.61
VPS51-216ENST00000534591 HECW2Q9P2P5 1572 aa25.14■■□□□ 1.61
VPS51-216ENST00000534591 ADGRL2O95490 1459 aa25.14■■□□□ 1.61
VPS51-216ENST00000534591 ADGBQ8N7X0 1667 aa25.13■■□□□ 1.61
VPS51-216ENST00000534591 SYCP2Q9BX26 1530 aa25.12■■□□□ 1.61
VPS51-216ENST00000534591 TRAPPC8Q9Y2L5 1435 aa25.12■■□□□ 1.61
VPS51-216ENST00000534591 MAGI2Q86UL8 1455 aa25.11■■□□□ 1.61
VPS51-216ENST00000534591 MBD5Q9P267 1494 aa25.11■■□□□ 1.61
VPS51-216ENST00000534591 KIAA1107Q9UPP5 1409 aa25.11■■□□□ 1.61
VPS51-216ENST00000534591 ABCA6Q8N139 1617 aa25.1■■□□□ 1.61
VPS51-216ENST00000534591 AFAP1Q8N556 730 aa25.09■■□□□ 1.61
VPS51-216ENST00000534591 NCOA1Q15788 1441 aa25.08■■□□□ 1.61
VPS51-216ENST00000534591 ANKRD30AQ9BXX3 1397 aa25.08■■□□□ 1.61
VPS51-216ENST00000534591 KIDINS220Q9ULH0 1771 aa25.08■■□□□ 1.61
VPS51-216ENST00000534591 MADDQ8WXG6 1647 aa25.08■■□□□ 1.61
VPS51-216ENST00000534591 CCDC141Q6ZP82 1450 aa25.08■■□□□ 1.61
VPS51-216ENST00000534591 DIP2CQ9Y2E4 1556 aa25.08■■□□□ 1.6
VPS51-216ENST00000534591 TSPY4P0CV99 314 aa25.07■■□□□ 1.6
VPS51-216ENST00000534591 TSPY10P0CW01 314 aa25.07■■□□□ 1.6
VPS51-216ENST00000534591 HNRNPMP52272 730 aaKnown RBP eCLIP25.06■■□□□ 1.6
VPS51-216ENST00000534591 C9orf84Q5VXU9 1444 aa25.05■■□□□ 1.6
VPS51-216ENST00000534591 RIMS1Q86UR5 1692 aaKnown RBP25.02■■□□□ 1.6
VPS51-216ENST00000534591 MLH3Q9UHC1 1453 aa25.01■■□□□ 1.59
VPS51-216ENST00000534591 ARID4BQ4LE39 1312 aaPredicted RBP25.01■■□□□ 1.59
VPS51-216ENST00000534591 ATP10AO60312 1499 aa25.01■■□□□ 1.59
VPS51-216ENST00000534591 MAST1Q9Y2H9 1570 aa24.99■■□□□ 1.59
VPS51-216ENST00000534591 FER1L4A9Z1Z3 1794 aa24.99■■□□□ 1.59
VPS51-216ENST00000534591 INO80Q9ULG1 1556 aaPredicted RBP24.99■■□□□ 1.59
VPS51-216ENST00000534591 REREQ9P2R6 1566 aa24.95■■□□□ 1.59
VPS51-216ENST00000534591 ATP7AQ04656 1500 aa24.93■■□□□ 1.58
VPS51-216ENST00000534591 PTPRMP28827 1452 aa24.93■■□□□ 1.58
VPS51-216ENST00000534591 TRIM52Q96A61 297 aa24.92■■□□□ 1.58
VPS51-216ENST00000534591 MYT1LQ9UL68 1186 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms