RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 MAP3K1Q13233 1512 aa22.21■■□□□ 1.15
VPS11-205ENST00000534551 ITSN2Q9NZM3 1697 aa22.19■■□□□ 1.14
VPS11-205ENST00000534551 NCOA2Q15596 1464 aa22.17■■□□□ 1.14
VPS11-205ENST00000534551 KANK4Q5T7N3 995 aaPredicted RBP22.17■■□□□ 1.14
VPS11-205ENST00000534551 SAMD9LQ8IVG5 1584 aa22.16■■□□□ 1.14
VPS11-205ENST00000534551 GPATCH8Q9UKJ3 1502 aaKnown RBP22.16■■□□□ 1.14
VPS11-205ENST00000534551 AKNAQ7Z591 1439 aa22.16■■□□□ 1.14
VPS11-205ENST00000534551 ADGRL1O94910 1474 aa22.15■■□□□ 1.14
VPS11-205ENST00000534551 ABCC1P33527 1531 aa22.14■■□□□ 1.13
VPS11-205ENST00000534551 CCNB3Q8WWL7 1395 aa22.1■■□□□ 1.13
VPS11-205ENST00000534551 DENND4BO75064 1496 aaPredicted RBP22.09■■□□□ 1.13
VPS11-205ENST00000534551 SYCP2Q9BX26 1530 aa22.08■■□□□ 1.13
VPS11-205ENST00000534551 ARHGEF12Q9NZN5 1544 aa22.08■■□□□ 1.13
VPS11-205ENST00000534551 RAPGEF3O95398 923 aa22.08■■□□□ 1.13
VPS11-205ENST00000534551 PHLDB1Q86UU1 1377 aa22.08■■□□□ 1.12
VPS11-205ENST00000534551 POGZQ7Z3K3 1410 aa22.07■■□□□ 1.12
VPS11-205ENST00000534551 SCAPERQ9BY12 1400 aa22.06■■□□□ 1.12
VPS11-205ENST00000534551 ZMYM4Q5VZL5 1548 aa22.06■■□□□ 1.12
VPS11-205ENST00000534551 EFCAB2Q5VUJ9 269 aa22.05■■□□□ 1.12
VPS11-205ENST00000534551 ARHGEF40Q8TER5 1519 aa22.04■■□□□ 1.12
VPS11-205ENST00000534551 APLP2Q06481 763 aa22.03■■□□□ 1.12
VPS11-205ENST00000534551 KDM5CP41229 1560 aa22.02■■□□□ 1.12
VPS11-205ENST00000534551 ZNF777Q9ULD5 760 aaPredicted RBP22.01■■□□□ 1.11
VPS11-205ENST00000534551 SIGLEC1Q9BZZ2 1709 aa22■■□□□ 1.11
VPS11-205ENST00000534551 TRAPPC8Q9Y2L5 1435 aa22■■□□□ 1.11
VPS11-205ENST00000534551 CAMSAP2Q08AD1 1489 aa21.99■■□□□ 1.11
VPS11-205ENST00000534551 HECW2Q9P2P5 1572 aa21.99■■□□□ 1.11
VPS11-205ENST00000534551 ZFYVE16Q7Z3T8 1539 aa21.98■■□□□ 1.11
VPS11-205ENST00000534551 CFDP1Q9UEE9 299 aaPredicted RBP21.98■■□□□ 1.11
VPS11-205ENST00000534551 ZNF644Q9H582 1327 aaPredicted RBP21.98■■□□□ 1.11
VPS11-205ENST00000534551 ZNF518AQ6AHZ1 1483 aa21.97■■□□□ 1.11
VPS11-205ENST00000534551 YEATS2Q9ULM3 1422 aa21.97■■□□□ 1.11
VPS11-205ENST00000534551 ABCA6Q8N139 1617 aa21.96■■□□□ 1.11
VPS11-205ENST00000534551 MYOM3Q5VTT5 1437 aa21.96■■□□□ 1.11
VPS11-205ENST00000534551 KIDINS220Q9ULH0 1771 aa21.94■■□□□ 1.1
VPS11-205ENST00000534551 PPARGC1BQ86YN6 1023 aaKnown RBP21.94■■□□□ 1.1
VPS11-205ENST00000534551 PTPN23Q9H3S7 1636 aa21.93■■□□□ 1.1
VPS11-205ENST00000534551 INO80Q9ULG1 1556 aaPredicted RBP21.92■■□□□ 1.1
VPS11-205ENST00000534551 DIP2CQ9Y2E4 1556 aa21.92■■□□□ 1.1
VPS11-205ENST00000534551 PLEKHH2Q8IVE3 1493 aa21.92■■□□□ 1.1
VPS11-205ENST00000534551 AFAP1Q8N556 730 aa21.91■■□□□ 1.1
VPS11-205ENST00000534551 MBD5Q9P267 1494 aa21.9■■□□□ 1.1
VPS11-205ENST00000534551 KIAA1107Q9UPP5 1409 aa21.9■■□□□ 1.1
VPS11-205ENST00000534551 HNRNPMP52272 730 aaKnown RBP eCLIP21.9■■□□□ 1.1
VPS11-205ENST00000534551 CROCC2H7BZ55 1655 aa21.88■■□□□ 1.09
VPS11-205ENST00000534551 FGD6Q6ZV73 1430 aa21.87■■□□□ 1.09
VPS11-205ENST00000534551 ARHGEF5Q12774 1597 aa21.87■■□□□ 1.09
VPS11-205ENST00000534551 ATP7AQ04656 1500 aa21.86■■□□□ 1.09
VPS11-205ENST00000534551 MAGI2Q86UL8 1455 aa21.86■■□□□ 1.09
VPS11-205ENST00000534551 MIA2Q96PC5 1412 aa21.86■■□□□ 1.09
VPS11-205ENST00000534551 ADGBQ8N7X0 1667 aa21.85■■□□□ 1.09
VPS11-205ENST00000534551 CCDC141Q6ZP82 1450 aa21.84■■□□□ 1.09
VPS11-205ENST00000534551 MLH3Q9UHC1 1453 aa21.84■■□□□ 1.09
VPS11-205ENST00000534551 BCORL1Q5H9F3 1711 aa21.82■■□□□ 1.08
VPS11-205ENST00000534551 TCOF1Q13428 1488 aaKnown RBP21.81■■□□□ 1.08
VPS11-205ENST00000534551 C9orf84Q5VXU9 1444 aa21.8■■□□□ 1.08
VPS11-205ENST00000534551 DNMT1P26358 1616 aaKnown RBP21.8■■□□□ 1.08
VPS11-205ENST00000534551 MYT1LQ9UL68 1186 aa21.79■■□□□ 1.08
VPS11-205ENST00000534551 REREQ9P2R6 1566 aa21.78■■□□□ 1.08
VPS11-205ENST00000534551 ATP10AO60312 1499 aa21.77■■□□□ 1.08
VPS11-205ENST00000534551 SPAG9O60271 1321 aaKnown RBP21.77■■□□□ 1.07
VPS11-205ENST00000534551 MADDQ8WXG6 1647 aa21.77■■□□□ 1.07
VPS11-205ENST00000534551 ADAMTSL3P82987 1691 aa21.76■■□□□ 1.07
VPS11-205ENST00000534551 MAST1Q9Y2H9 1570 aa21.76■■□□□ 1.07
VPS11-205ENST00000534551 PLXNC1O60486 1568 aa21.75■■□□□ 1.07
VPS11-205ENST00000534551 KDM4FA0A1W2PPD8 638 aa21.75■■□□□ 1.07
VPS11-205ENST00000534551 FER1L4A9Z1Z3 1794 aa21.73■■□□□ 1.07
VPS11-205ENST00000534551 RIMS1Q86UR5 1692 aaKnown RBP21.72■■□□□ 1.07
VPS11-205ENST00000534551 ABCC5O15440 1437 aa21.72■■□□□ 1.07
VPS11-205ENST00000534551 DAPK1P53355 1430 aa21.72■■□□□ 1.07
VPS11-205ENST00000534551 ARID4BQ4LE39 1312 aaPredicted RBP21.71■■□□□ 1.07
VPS11-205ENST00000534551 SHANK2Q9UPX8 1470 aa21.69■■□□□ 1.06
VPS11-205ENST00000534551 RTEL1-TNFRSF6BF6WH68 1400 aa21.68■■□□□ 1.06
VPS11-205ENST00000534551 A2MP01023 1474 aa21.68■■□□□ 1.06
VPS11-205ENST00000534551 FAM50AQ14320 339 aaKnown RBP21.67■■□□□ 1.06
VPS11-205ENST00000534551 AGLP35573 1532 aa21.66■■□□□ 1.06
VPS11-205ENST00000534551 MLECQ14165 292 aa21.64■■□□□ 1.05
VPS11-205ENST00000534551 RRBP1Q9P2E9 1410 aaKnown RBP21.62■■□□□ 1.05
VPS11-205ENST00000534551 PTPRKQ15262 1439 aa21.61■■□□□ 1.05
VPS11-205ENST00000534551 RSPH4AQ5TD94 716 aa21.6■■□□□ 1.05
VPS11-205ENST00000534551 TSPY4P0CV99 314 aa21.59■■□□□ 1.05
VPS11-205ENST00000534551 TSPY10P0CW01 314 aa21.59■■□□□ 1.05
VPS11-205ENST00000534551 CLTCQ00610 1675 aaKnown RBP21.57■■□□□ 1.04
VPS11-205ENST00000534551 CHIC2Q9UKJ5 165 aa21.57■■□□□ 1.04
VPS11-205ENST00000534551 EIF2AK4Q9P2K8 1649 aaKnown RBP21.57■■□□□ 1.04
VPS11-205ENST00000534551 ADGRL2O95490 1459 aa21.56■■□□□ 1.04
VPS11-205ENST00000534551 PTPRMP28827 1452 aa21.56■■□□□ 1.04
VPS11-205ENST00000534551 DHX29Q7Z478 1369 aaKnown RBP21.55■■□□□ 1.04
VPS11-205ENST00000534551 KIF15Q9NS87 1388 aa21.55■■□□□ 1.04
VPS11-205ENST00000534551 RNF17Q9BXT8 1623 aaKnown RBP21.55■■□□□ 1.04
VPS11-205ENST00000534551 DUOX2Q9NRD8 1548 aa21.55■■□□□ 1.04
VPS11-205ENST00000534551 MROH1Q8NDA8 1641 aa21.54■■□□□ 1.04
VPS11-205ENST00000534551 C3P01024 1663 aa21.53■■□□□ 1.04
VPS11-205ENST00000534551 ITGAEP38570 1179 aa21.52■■□□□ 1.04
VPS11-205ENST00000534551 RRP7BPQ9NSQ0 103 aa21.51■■□□□ 1.03
VPS11-205ENST00000534551 CEP152O94986 1710 aa21.51■■□□□ 1.03
VPS11-205ENST00000534551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.5■■□□□ 1.03
VPS11-205ENST00000534551 NCOA1Q15788 1441 aa21.5■■□□□ 1.03
VPS11-205ENST00000534551 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
VPS11-205ENST00000534551 MROH2AA6NES4 1674 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms