RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 MTUS2Q5JR59 1369 aa33.98■■■■□ 3.03
PKP3-211ENST00000534401 ADGRL1O94910 1474 aa33.98■■■■□ 3.03
PKP3-211ENST00000534401 EHBP1L1Q8N3D4 1523 aa33.97■■■■□ 3.03
PKP3-211ENST00000534401 SCAPERQ9BY12 1400 aa33.96■■■■□ 3.03
PKP3-211ENST00000534401 ARHGAP5Q13017 1502 aa33.96■■■■□ 3.03
PKP3-211ENST00000534401 MAP3K1Q13233 1512 aa33.95■■■■□ 3.03
PKP3-211ENST00000534401 TIAM1Q13009 1591 aa33.95■■■■□ 3.03
PKP3-211ENST00000534401 ZMYM4Q5VZL5 1548 aa33.94■■■■□ 3.02
PKP3-211ENST00000534401 GPATCH8Q9UKJ3 1502 aaKnown RBP33.94■■■■□ 3.02
PKP3-211ENST00000534401 POGZQ7Z3K3 1410 aa33.92■■■■□ 3.02
PKP3-211ENST00000534401 KDM4FA0A1W2PPD8 638 aa33.9■■■■□ 3.02
PKP3-211ENST00000534401 MAGI2Q86UL8 1455 aa33.87■■■■□ 3.01
PKP3-211ENST00000534401 ABCC1P33527 1531 aa33.83■■■■□ 3.01
PKP3-211ENST00000534401 CCNB3Q8WWL7 1395 aa33.83■■■■□ 3.01
PKP3-211ENST00000534401 LRRC9Q6ZRR7 1453 aa33.82■■■■□ 3.01
PKP3-211ENST00000534401 ARHGEF40Q8TER5 1519 aa33.82■■■■□ 3
PKP3-211ENST00000534401 ARHGEF12Q9NZN5 1544 aa33.82■■■■□ 3
PKP3-211ENST00000534401 ZNF518AQ6AHZ1 1483 aa33.81■■■■□ 3
PKP3-211ENST00000534401 KDM5CP41229 1560 aa33.81■■■■□ 3
PKP3-211ENST00000534401 SUPT6HQ7KZ85 1726 aaKnown RBP33.79■■■■□ 3
PKP3-211ENST00000534401 SAMD9LQ8IVG5 1584 aa33.78■■■■□ 3
PKP3-211ENST00000534401 ITSN2Q9NZM3 1697 aa33.77■■■■□ 3
PKP3-211ENST00000534401 NCOA2Q15596 1464 aa33.76■■■■□ 3
PKP3-211ENST00000534401 YEATS2Q9ULM3 1422 aa33.75■■■□□ 2.99
PKP3-211ENST00000534401 ZFYVE16Q7Z3T8 1539 aa33.74■■■□□ 2.99
PKP3-211ENST00000534401 KIAA1107Q9UPP5 1409 aa33.74■■■□□ 2.99
PKP3-211ENST00000534401 AFAP1Q8N556 730 aa33.74■■■□□ 2.99
PKP3-211ENST00000534401 CFDP1Q9UEE9 299 aaPredicted RBP33.74■■■□□ 2.99
PKP3-211ENST00000534401 TRAPPC8Q9Y2L5 1435 aa33.73■■■□□ 2.99
PKP3-211ENST00000534401 KANK4Q5T7N3 995 aaPredicted RBP33.73■■■□□ 2.99
PKP3-211ENST00000534401 PLEKHH2Q8IVE3 1493 aa33.7■■■□□ 2.99
PKP3-211ENST00000534401 MLH3Q9UHC1 1453 aa33.69■■■□□ 2.98
PKP3-211ENST00000534401 ZNF777Q9ULD5 760 aaPredicted RBP33.65■■■□□ 2.98
PKP3-211ENST00000534401 HECW2Q9P2P5 1572 aa33.64■■■□□ 2.98
PKP3-211ENST00000534401 SYCP2Q9BX26 1530 aa33.64■■■□□ 2.98
PKP3-211ENST00000534401 ATP10AO60312 1499 aa33.63■■■□□ 2.97
PKP3-211ENST00000534401 SIGLEC1Q9BZZ2 1709 aa33.62■■■□□ 2.97
PKP3-211ENST00000534401 ADAMTSL3P82987 1691 aa33.61■■■□□ 2.97
PKP3-211ENST00000534401 HNRNPMP52272 730 aaKnown RBP eCLIP33.6■■■□□ 2.97
PKP3-211ENST00000534401 MBD5Q9P267 1494 aa33.6■■■□□ 2.97
PKP3-211ENST00000534401 BCORL1Q5H9F3 1711 aa33.59■■■□□ 2.97
PKP3-211ENST00000534401 ZNF644Q9H582 1327 aaPredicted RBP33.59■■■□□ 2.97
PKP3-211ENST00000534401 KIDINS220Q9ULH0 1771 aa33.59■■■□□ 2.97
PKP3-211ENST00000534401 DIP2CQ9Y2E4 1556 aa33.57■■■□□ 2.96
PKP3-211ENST00000534401 REREQ9P2R6 1566 aa33.56■■■□□ 2.96
PKP3-211ENST00000534401 C9orf84Q5VXU9 1444 aa33.56■■■□□ 2.96
PKP3-211ENST00000534401 APLP2Q06481 763 aa33.56■■■□□ 2.96
PKP3-211ENST00000534401 ABCA6Q8N139 1617 aa33.53■■■□□ 2.96
PKP3-211ENST00000534401 MYOM3Q5VTT5 1437 aa33.5■■■□□ 2.95
PKP3-211ENST00000534401 MIA2Q96PC5 1412 aa33.5■■■□□ 2.95
PKP3-211ENST00000534401 CAMSAP2Q08AD1 1489 aa33.5■■■□□ 2.95
PKP3-211ENST00000534401 ARID4BQ4LE39 1312 aaPredicted RBP33.49■■■□□ 2.95
PKP3-211ENST00000534401 INO80Q9ULG1 1556 aaPredicted RBP33.48■■■□□ 2.95
PKP3-211ENST00000534401 SPAG9O60271 1321 aaKnown RBP33.48■■■□□ 2.95
PKP3-211ENST00000534401 RSPH4AQ5TD94 716 aa33.45■■■□□ 2.95
PKP3-211ENST00000534401 AGLP35573 1532 aa33.44■■■□□ 2.94
PKP3-211ENST00000534401 ATP7AQ04656 1500 aa33.44■■■□□ 2.94
PKP3-211ENST00000534401 ARHGEF5Q12774 1597 aa33.43■■■□□ 2.94
PKP3-211ENST00000534401 RTEL1-TNFRSF6BF6WH68 1400 aa33.43■■■□□ 2.94
PKP3-211ENST00000534401 MADDQ8WXG6 1647 aa33.41■■■□□ 2.94
PKP3-211ENST00000534401 CCDC141Q6ZP82 1450 aa33.39■■■□□ 2.94
PKP3-211ENST00000534401 MYT1LQ9UL68 1186 aa33.39■■■□□ 2.94
PKP3-211ENST00000534401 PTPRMP28827 1452 aa33.37■■■□□ 2.93
PKP3-211ENST00000534401 PLXNC1O60486 1568 aa33.32■■■□□ 2.92
PKP3-211ENST00000534401 ADGBQ8N7X0 1667 aa33.29■■■□□ 2.92
PKP3-211ENST00000534401 FGD6Q6ZV73 1430 aa33.29■■■□□ 2.92
PKP3-211ENST00000534401 A2MP01023 1474 aa33.29■■■□□ 2.92
PKP3-211ENST00000534401 RIMS1Q86UR5 1692 aaKnown RBP33.29■■■□□ 2.92
PKP3-211ENST00000534401 TCOF1Q13428 1488 aaKnown RBP33.28■■■□□ 2.92
PKP3-211ENST00000534401 FER1L4A9Z1Z3 1794 aa33.27■■■□□ 2.92
PKP3-211ENST00000534401 PTPN23Q9H3S7 1636 aa33.27■■■□□ 2.92
PKP3-211ENST00000534401 MAST1Q9Y2H9 1570 aa33.26■■■□□ 2.92
PKP3-211ENST00000534401 MLECQ14165 292 aa33.26■■■□□ 2.91
PKP3-211ENST00000534401 TSPY4P0CV99 314 aa33.22■■■□□ 2.91
PKP3-211ENST00000534401 TSPY10P0CW01 314 aa33.22■■■□□ 2.91
PKP3-211ENST00000534401 DHX29Q7Z478 1369 aaKnown RBP33.21■■■□□ 2.91
PKP3-211ENST00000534401 ABCC5O15440 1437 aa33.16■■■□□ 2.9
PKP3-211ENST00000534401 DNMT1P26358 1616 aaKnown RBP33.13■■■□□ 2.89
PKP3-211ENST00000534401 SHANK2Q9UPX8 1470 aa33.13■■■□□ 2.89
PKP3-211ENST00000534401 CROCC2H7BZ55 1655 aa33.12■■■□□ 2.89
PKP3-211ENST00000534401 DAPK1P53355 1430 aa33.1■■■□□ 2.89
PKP3-211ENST00000534401 PPP6R1Q9UPN7 881 aa33.09■■■□□ 2.89
PKP3-211ENST00000534401 CNTLNQ9NXG0 1405 aa33.09■■■□□ 2.89
PKP3-211ENST00000534401 MROH2AA6NES4 1674 aa33.04■■■□□ 2.88
PKP3-211ENST00000534401 SETD1BQ9UPS6 1966 aaKnown RBP33.03■■■□□ 2.88
PKP3-211ENST00000534401 C3P01024 1663 aa33.01■■■□□ 2.88
PKP3-211ENST00000534401 CEBPAP49715 358 aaPredicted RBP32.99■■■□□ 2.87
PKP3-211ENST00000534401 KIF3BO15066 747 aa32.98■■■□□ 2.87
PKP3-211ENST00000534401 GGT6Q6P531 493 aa32.98■■■□□ 2.87
PKP3-211ENST00000534401 DUOX2Q9NRD8 1548 aa32.97■■■□□ 2.87
PKP3-211ENST00000534401 FAM135AQ9P2D6 1515 aa32.97■■■□□ 2.87
PKP3-211ENST00000534401 ESF1Q9H501 851 aaKnown RBP32.97■■■□□ 2.87
PKP3-211ENST00000534401 EIF2AK4Q9P2K8 1649 aaKnown RBP32.97■■■□□ 2.87
PKP3-211ENST00000534401 LMTK3Q96Q04 1460 aa32.96■■■□□ 2.87
PKP3-211ENST00000534401 RNF17Q9BXT8 1623 aaKnown RBP32.95■■■□□ 2.86
PKP3-211ENST00000534401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.95■■■□□ 2.862e-6■■■■■ 28.3
PKP3-211ENST00000534401 ADGRL2O95490 1459 aa32.94■■■□□ 2.86
PKP3-211ENST00000534401 ILDR1Q86SU0 546 aaPredicted RBP32.94■■■□□ 2.86
PKP3-211ENST00000534401 CLTCQ00610 1675 aaKnown RBP32.94■■■□□ 2.86
PKP3-211ENST00000534401 ZMYM3Q14202 1370 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms