RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 VPS8Q8N3P4 1428 aa30.21■■■□□ 2.43
PACS1-215ENST00000534273 RICTORQ6R327 1708 aa30.19■■■□□ 2.42
PACS1-215ENST00000534273 POGZQ7Z3K3 1410 aa30.18■■■□□ 2.42
PACS1-215ENST00000534273 PREX2Q70Z35 1606 aa30.14■■■□□ 2.42
PACS1-215ENST00000534273 ZMYM4Q5VZL5 1548 aa30.14■■■□□ 2.42
PACS1-215ENST00000534273 CDC42BPBQ9Y5S2 1711 aa30.13■■■□□ 2.41
PACS1-215ENST00000534273 GPATCH8Q9UKJ3 1502 aaKnown RBP30.12■■■□□ 2.41
PACS1-215ENST00000534273 MAGI2Q86UL8 1455 aa30.1■■■□□ 2.41
PACS1-215ENST00000534273 EHBP1L1Q8N3D4 1523 aa30.1■■■□□ 2.41
PACS1-215ENST00000534273 ARHGEF40Q8TER5 1519 aa30.09■■■□□ 2.41
PACS1-215ENST00000534273 CCNB3Q8WWL7 1395 aa30.09■■■□□ 2.41
PACS1-215ENST00000534273 CDC42BPAQ5VT25 1732 aa30.08■■■□□ 2.41
PACS1-215ENST00000534273 AFAP1Q8N556 730 aa30.08■■■□□ 2.41
PACS1-215ENST00000534273 YEATS2Q9ULM3 1422 aa30.07■■■□□ 2.4
PACS1-215ENST00000534273 ZFYVE16Q7Z3T8 1539 aa30.06■■■□□ 2.4
PACS1-215ENST00000534273 ZNF518AQ6AHZ1 1483 aa30.06■■■□□ 2.4
PACS1-215ENST00000534273 TIAM1Q13009 1591 aa30.04■■■□□ 2.4
PACS1-215ENST00000534273 CFDP1Q9UEE9 299 aaPredicted RBP30.04■■■□□ 2.4
PACS1-215ENST00000534273 ZNF777Q9ULD5 760 aaPredicted RBP30.04■■■□□ 2.4
PACS1-215ENST00000534273 ARHGEF12Q9NZN5 1544 aa30.04■■■□□ 2.4
PACS1-215ENST00000534273 ABCC1P33527 1531 aa30.03■■■□□ 2.4
PACS1-215ENST00000534273 TRAPPC8Q9Y2L5 1435 aa30.01■■■□□ 2.39
PACS1-215ENST00000534273 ARID4BQ4LE39 1312 aaPredicted RBP30■■■□□ 2.39
PACS1-215ENST00000534273 KDM5CP41229 1560 aa29.99■■■□□ 2.39
PACS1-215ENST00000534273 MAP3K1Q13233 1512 aa29.97■■■□□ 2.39
PACS1-215ENST00000534273 SAMD9LQ8IVG5 1584 aa29.97■■■□□ 2.39
PACS1-215ENST00000534273 NCOA2Q15596 1464 aa29.96■■■□□ 2.39
PACS1-215ENST00000534273 LRRC9Q6ZRR7 1453 aa29.96■■■□□ 2.39
PACS1-215ENST00000534273 ATP10AO60312 1499 aa29.94■■■□□ 2.38
PACS1-215ENST00000534273 KIAA1107Q9UPP5 1409 aa29.94■■■□□ 2.38
PACS1-215ENST00000534273 ITSN2Q9NZM3 1697 aa29.93■■■□□ 2.38
PACS1-215ENST00000534273 HNRNPMP52272 730 aaKnown RBP eCLIP29.93■■■□□ 2.38
PACS1-215ENST00000534273 KANK4Q5T7N3 995 aaPredicted RBP29.93■■■□□ 2.38
PACS1-215ENST00000534273 MLH3Q9UHC1 1453 aa29.93■■■□□ 2.38
PACS1-215ENST00000534273 PLEKHH2Q8IVE3 1493 aa29.92■■■□□ 2.38
PACS1-215ENST00000534273 MYT1LQ9UL68 1186 aa29.91■■■□□ 2.38
PACS1-215ENST00000534273 SUPT6HQ7KZ85 1726 aaKnown RBP29.9■■■□□ 2.38
PACS1-215ENST00000534273 SYCP2Q9BX26 1530 aa29.9■■■□□ 2.38
PACS1-215ENST00000534273 ZNF644Q9H582 1327 aaPredicted RBP29.9■■■□□ 2.38
PACS1-215ENST00000534273 HECW2Q9P2P5 1572 aa29.89■■■□□ 2.38
PACS1-215ENST00000534273 ADAMTSL3P82987 1691 aa29.88■■■□□ 2.37
PACS1-215ENST00000534273 C9orf84Q5VXU9 1444 aa29.88■■■□□ 2.37
PACS1-215ENST00000534273 BCORL1Q5H9F3 1711 aa29.88■■■□□ 2.37
PACS1-215ENST00000534273 SIGLEC1Q9BZZ2 1709 aa29.85■■■□□ 2.37
PACS1-215ENST00000534273 APLP2Q06481 763 aa29.85■■■□□ 2.37
PACS1-215ENST00000534273 DIP2CQ9Y2E4 1556 aa29.82■■■□□ 2.36
PACS1-215ENST00000534273 SPAG9O60271 1321 aaKnown RBP29.82■■■□□ 2.36
PACS1-215ENST00000534273 MBD5Q9P267 1494 aa29.8■■■□□ 2.36
PACS1-215ENST00000534273 MLECQ14165 292 aa29.79■■■□□ 2.36
PACS1-215ENST00000534273 PTPRMP28827 1452 aa29.79■■■□□ 2.36
PACS1-215ENST00000534273 ABCA6Q8N139 1617 aa29.78■■■□□ 2.36
PACS1-215ENST00000534273 KIDINS220Q9ULH0 1771 aa29.77■■■□□ 2.36
PACS1-215ENST00000534273 MADDQ8WXG6 1647 aa29.77■■■□□ 2.36
PACS1-215ENST00000534273 REREQ9P2R6 1566 aa29.76■■■□□ 2.35
PACS1-215ENST00000534273 CAMSAP2Q08AD1 1489 aa29.74■■■□□ 2.35
PACS1-215ENST00000534273 ATP7AQ04656 1500 aa29.71■■■□□ 2.35
PACS1-215ENST00000534273 MYOM3Q5VTT5 1437 aa29.7■■■□□ 2.34
PACS1-215ENST00000534273 RSPH4AQ5TD94 716 aa29.69■■■□□ 2.34
PACS1-215ENST00000534273 AGLP35573 1532 aa29.69■■■□□ 2.34
PACS1-215ENST00000534273 INO80Q9ULG1 1556 aaPredicted RBP29.69■■■□□ 2.34
PACS1-215ENST00000534273 MIA2Q96PC5 1412 aa29.66■■■□□ 2.34
PACS1-215ENST00000534273 RIMS1Q86UR5 1692 aaKnown RBP29.66■■■□□ 2.34
PACS1-215ENST00000534273 CCDC141Q6ZP82 1450 aa29.65■■■□□ 2.34
PACS1-215ENST00000534273 RTEL1-TNFRSF6BF6WH68 1400 aa29.64■■■□□ 2.34
PACS1-215ENST00000534273 A2MP01023 1474 aa29.61■■■□□ 2.33
PACS1-215ENST00000534273 ARHGEF5Q12774 1597 aa29.6■■■□□ 2.33
PACS1-215ENST00000534273 FER1L4A9Z1Z3 1794 aa29.58■■■□□ 2.33
PACS1-215ENST00000534273 TSPY4P0CV99 314 aa29.56■■■□□ 2.32
PACS1-215ENST00000534273 TSPY10P0CW01 314 aa29.56■■■□□ 2.32
PACS1-215ENST00000534273 PLPPR3Q6T4P5 718 aa29.56■■■□□ 2.32
PACS1-215ENST00000534273 PLXNC1O60486 1568 aa29.56■■■□□ 2.32
PACS1-215ENST00000534273 DHX29Q7Z478 1369 aaKnown RBP29.52■■■□□ 2.32
PACS1-215ENST00000534273 FGD6Q6ZV73 1430 aa29.51■■■□□ 2.31
PACS1-215ENST00000534273 ADGBQ8N7X0 1667 aa29.5■■■□□ 2.31
PACS1-215ENST00000534273 CEBPAP49715 358 aaPredicted RBP29.5■■■□□ 2.31
PACS1-215ENST00000534273 ESF1Q9H501 851 aaKnown RBP29.49■■■□□ 2.31
PACS1-215ENST00000534273 PTPN23Q9H3S7 1636 aa29.46■■■□□ 2.31
PACS1-215ENST00000534273 CNTLNQ9NXG0 1405 aa29.45■■■□□ 2.31
PACS1-215ENST00000534273 TCOF1Q13428 1488 aaKnown RBP29.45■■■□□ 2.31
PACS1-215ENST00000534273 GGT6Q6P531 493 aa29.44■■■□□ 2.3
PACS1-215ENST00000534273 MAST1Q9Y2H9 1570 aa29.43■■■□□ 2.3
PACS1-215ENST00000534273 ABCC5O15440 1437 aa29.42■■■□□ 2.3
PACS1-215ENST00000534273 LMTK3Q96Q04 1460 aa29.42■■■□□ 2.3
PACS1-215ENST00000534273 PPP6R1Q9UPN7 881 aa29.41■■■□□ 2.3
PACS1-215ENST00000534273 KIF3BO15066 747 aa29.39■■■□□ 2.3
PACS1-215ENST00000534273 DAPK1P53355 1430 aa29.36■■■□□ 2.29
PACS1-215ENST00000534273 SHANK2Q9UPX8 1470 aa29.36■■■□□ 2.29
PACS1-215ENST00000534273 ZMYM3Q14202 1370 aa29.35■■■□□ 2.29
PACS1-215ENST00000534273 C3P01024 1663 aa29.33■■■□□ 2.29
PACS1-215ENST00000534273 DNMT1P26358 1616 aaKnown RBP29.31■■■□□ 2.28
PACS1-215ENST00000534273 FAM50AQ14320 339 aaKnown RBP29.31■■■□□ 2.28
PACS1-215ENST00000534273 PPARGC1BQ86YN6 1023 aaKnown RBP29.31■■■□□ 2.28
PACS1-215ENST00000534273 HSPA2P54652 639 aa29.3■■■□□ 2.28
PACS1-215ENST00000534273 MROH2AA6NES4 1674 aa29.29■■■□□ 2.28
PACS1-215ENST00000534273 KIF15Q9NS87 1388 aa29.27■■■□□ 2.28
PACS1-215ENST00000534273 RRP7BPQ9NSQ0 103 aa29.27■■■□□ 2.28
PACS1-215ENST00000534273 CROCC2H7BZ55 1655 aa29.27■■■□□ 2.28
PACS1-215ENST00000534273 CLTCQ00610 1675 aaKnown RBP29.27■■■□□ 2.28
PACS1-215ENST00000534273 NPATQ14207 1427 aa29.26■■■□□ 2.27
PACS1-215ENST00000534273 DUOX2Q9NRD8 1548 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms