RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 CRISPLD2Q9H0B8 497 aa9.09□□□□□ -0.95
HIPK3-206ENST00000534262 KIF3CO14782 793 aa9.08□□□□□ -0.96
HIPK3-206ENST00000534262 C3orf67Q6ZVT6 689 aa9.08□□□□□ -0.96
HIPK3-206ENST00000534262 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.08□□□□□ -0.96
HIPK3-206ENST00000534262 PDE4AP27815 886 aa9.07□□□□□ -0.96
HIPK3-206ENST00000534262 VSIG10Q8N0Z9 540 aa9.07□□□□□ -0.96
HIPK3-206ENST00000534262 OTUD5Q96G74 571 aa9.07□□□□□ -0.96
HIPK3-206ENST00000534262 GPHNQ9NQX3 736 aaPredicted RBP9.07□□□□□ -0.96
HIPK3-206ENST00000534262 KDM2AQ9Y2K7 1162 aa9.07□□□□□ -0.96
HIPK3-206ENST00000534262 SCUBE2Q9NQ36 999 aa9.05□□□□□ -0.96
HIPK3-206ENST00000534262 C2orf72A6NCS6 295 aa9.04□□□□□ -0.96
HIPK3-206ENST00000534262 MFSD10Q14728 455 aa9.03□□□□□ -0.96
HIPK3-206ENST00000534262 LARP6Q9BRS8 491 aaKnown RBP9.03□□□□□ -0.96
HIPK3-206ENST00000534262 TMC2Q8TDI7 906 aa9.02□□□□□ -0.97
HIPK3-206ENST00000534262 FOXK1P85037 733 aa9.01□□□□□ -0.97
HIPK3-206ENST00000534262 SLAIN1Q8ND83 568 aa9.01□□□□□ -0.97
HIPK3-206ENST00000534262 DSG2Q14126 1118 aa9□□□□□ -0.97
HIPK3-206ENST00000534262 DDX27Q96GQ7 796 aaKnown RBP8.98□□□□□ -0.97
HIPK3-206ENST00000534262 PPP1R15BQ5SWA1 713 aa8.97□□□□□ -0.97
HIPK3-206ENST00000534262 PLPP6Q8IY26 295 aa8.96□□□□□ -0.98
HIPK3-206ENST00000534262 WDR70Q9NW82 654 aa8.96□□□□□ -0.98
HIPK3-206ENST00000534262 CAMK2BQ13554 666 aa8.94□□□□□ -0.98
HIPK3-206ENST00000534262 HOXB3P14651 431 aaPredicted RBP8.91□□□□□ -0.98
HIPK3-206ENST00000534262 E2F4Q16254 413 aa8.91□□□□□ -0.98
HIPK3-206ENST00000534262 SLC34A2O95436 690 aa8.9□□□□□ -0.98
HIPK3-206ENST00000534262 EMILIN3Q9NT22 766 aa8.88□□□□□ -0.99
HIPK3-206ENST00000534262 OXER1Q8TDS5 423 aa8.87□□□□□ -0.99
HIPK3-206ENST00000534262 PTCD2Q8WV60 388 aaKnown RBP8.87□□□□□ -0.99
HIPK3-206ENST00000534262 ARIH1Q9Y4X5 557 aaPredicted RBP8.87□□□□□ -0.99
HIPK3-206ENST00000534262 SNPHO15079 494 aa8.86□□□□□ -0.99
HIPK3-206ENST00000534262 KCNV2Q8TDN2 545 aa8.86□□□□□ -0.99
HIPK3-206ENST00000534262 DOK7Q18PE1 504 aa8.85□□□□□ -0.99
HIPK3-206ENST00000534262 P3H3Q8IVL6 736 aa8.83□□□□□ -1
HIPK3-206ENST00000534262 ARHGEF1Q92888 912 aaKnown RBP8.83□□□□□ -1
HIPK3-206ENST00000534262 GPR153Q6NV75 609 aa8.82□□□□□ -1
HIPK3-206ENST00000534262 ZSWIM6Q9HCJ5 1215 aa8.82□□□□□ -1
HIPK3-206ENST00000534262 PCDHGA4Q9Y5G9 962 aa8.81□□□□□ -1
HIPK3-206ENST00000534262 KDM4FA0A1W2PPD8 638 aa8.8□□□□□ -1
HIPK3-206ENST00000534262 UPF1Q92900 1129 aaKnown RBP eCLIP8.8□□□□□ -1
HIPK3-206ENST00000534262 DPYSL4O14531 572 aa8.79□□□□□ -1
HIPK3-206ENST00000534262 RIMBP2O15034 1052 aa8.79□□□□□ -1
HIPK3-206ENST00000534262 TBC1D12O60347 775 aa8.79□□□□□ -1
HIPK3-206ENST00000534262 MAP3K9P80192 1104 aa8.79□□□□□ -1
HIPK3-206ENST00000534262 ZNF710Q8N1W2 664 aa8.79□□□□□ -1
HIPK3-206ENST00000534262 ARSIQ5FYB1 569 aa8.78□□□□□ -1
HIPK3-206ENST00000534262 ST18O60284 1047 aa8.77□□□□□ -1.01
HIPK3-206ENST00000534262 HOXB1P14653 301 aaPredicted RBP8.77□□□□□ -1.01
HIPK3-206ENST00000534262 ANO8Q9HCE9 1232 aaPredicted RBP8.77□□□□□ -1.01
HIPK3-206ENST00000534262 KHSRPQ92945 711 aaKnown RBP eCLIP8.76□□□□□ -1.01
HIPK3-206ENST00000534262 FAM163AQ96GL9 167 aaPredicted RBP8.76□□□□□ -1.01
HIPK3-206ENST00000534262 SPDYE16A6NNV3 312 aaPredicted RBP8.75□□□□□ -1.01
HIPK3-206ENST00000534262 PDIA6Q15084 440 aa8.75□□□□□ -1.01
HIPK3-206ENST00000534262 LCE2DQ5TA82 110 aaPredicted RBP8.75□□□□□ -1.01
HIPK3-206ENST00000534262 EVI5O60447 810 aa8.74□□□□□ -1.01
HIPK3-206ENST00000534262 NUDT7P0C024 238 aa8.73□□□□□ -1.01
HIPK3-206ENST00000534262 PTGER2P43116 358 aa8.71□□□□□ -1.02
HIPK3-206ENST00000534262 SEMA3EO15041 775 aa8.69□□□□□ -1.02
HIPK3-206ENST00000534262 LHX6Q9UPM6 363 aa8.68□□□□□ -1.02
HIPK3-206ENST00000534262 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
HIPK3-206ENST00000534262 ZNF316A6NFI3 1004 aaPredicted RBP8.66□□□□□ -1.02
HIPK3-206ENST00000534262 MARVELD3Q96A59 401 aa8.66□□□□□ -1.02
HIPK3-206ENST00000534262 MLLT3P42568 568 aaPredicted RBP8.65□□□□□ -1.02
HIPK3-206ENST00000534262 FOSBP53539 338 aa8.64□□□□□ -1.03
HIPK3-206ENST00000534262 NBR1Q14596 966 aa8.64□□□□□ -1.03
HIPK3-206ENST00000534262 BCANQ96GW7 911 aa8.64□□□□□ -1.03
HIPK3-206ENST00000534262 PHF14O94880 888 aa8.63□□□□□ -1.03
HIPK3-206ENST00000534262 EMP3P54852 163 aa8.63□□□□□ -1.03
HIPK3-206ENST00000534262 DDX12PQ92771 950 aa8.63□□□□□ -1.03
HIPK3-206ENST00000534262 PCDHGA10Q9Y5H3 936 aa8.63□□□□□ -1.03
HIPK3-206ENST00000534262 JPH4Q96JJ6 628 aa8.62□□□□□ -1.03
HIPK3-206ENST00000534262 ERBB3P21860 1342 aa8.61□□□□□ -1.03
HIPK3-206ENST00000534262 POTEB3A0JP26 581 aa8.61□□□□□ -1.03
HIPK3-206ENST00000534262 PSDA5PKW4 1024 aaPredicted RBP8.61□□□□□ -1.03
HIPK3-206ENST00000534262 GRXCR2A6NFK2 248 aa8.61□□□□□ -1.03
HIPK3-206ENST00000534262 OSBPP22059 807 aa8.61□□□□□ -1.03
HIPK3-206ENST00000534262 POTEBQ6S5H4 581 aa8.61□□□□□ -1.03
HIPK3-206ENST00000534262 FAM205CA6NFA0 338 aa8.6□□□□□ -1.03
HIPK3-206ENST00000534262 EPAS1Q99814 870 aa8.6□□□□□ -1.03
HIPK3-206ENST00000534262 VARS2Q5ST30 1063 aaKnown RBP8.59□□□□□ -1.03
HIPK3-206ENST00000534262 ZNF454Q8N9F8 522 aa8.59□□□□□ -1.03
HIPK3-206ENST00000534262 PRIM1P49642 420 aaKnown RBP8.58□□□□□ -1.04
HIPK3-206ENST00000534262 SMYD5Q6GMV2 418 aa8.58□□□□□ -1.04
HIPK3-206ENST00000534262 TYW1BQ6NUM6 668 aa8.58□□□□□ -1.04
HIPK3-206ENST00000534262 HS3ST6Q96QI5 342 aa8.58□□□□□ -1.04
HIPK3-206ENST00000534262 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.57□□□□□ -1.04
HIPK3-206ENST00000534262 FBXW7Q969H0 707 aa8.57□□□□□ -1.04
HIPK3-206ENST00000534262 ZDHHC16Q969W1 377 aa8.57□□□□□ -1.04
HIPK3-206ENST00000534262 PPP4R3BQ5MIZ7 849 aa8.56□□□□□ -1.04
HIPK3-206ENST00000534262 ZNF687Q8N1G0 1237 aa8.56□□□□□ -1.04
HIPK3-206ENST00000534262 EN1Q05925 392 aaPredicted RBP8.55□□□□□ -1.04
HIPK3-206ENST00000534262 ADAM33Q9BZ11 813 aa8.55□□□□□ -1.04
HIPK3-206ENST00000534262 PRKCSHP14314 528 aaPredicted RBP8.54□□□□□ -1.04
HIPK3-206ENST00000534262 POTEGQ6S5H5 508 aa8.54□□□□□ -1.04
HIPK3-206ENST00000534262 POTEEQ6S8J3 1075 aa8.54□□□□□ -1.04
HIPK3-206ENST00000534262 BCL2L12Q9HB09 334 aa8.54□□□□□ -1.04
HIPK3-206ENST00000534262 POTEMA6NI47 508 aa8.53□□□□□ -1.04
HIPK3-206ENST00000534262 C6orf132Q5T0Z8 1188 aa8.53□□□□□ -1.04
HIPK3-206ENST00000534262 RBM26Q5T8P6 1007 aaKnown RBP8.53□□□□□ -1.04
HIPK3-206ENST00000534262 TULP1O00294 542 aaPredicted RBP8.51□□□□□ -1.05
HIPK3-206ENST00000534262 RBM33Q96EV2 1170 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms