RNA–Protein interactions for RNA: ENST00000534171.5

ALKBH3-212, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 5

Gene ALKBH3, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-212ENST00000534171 KIF14Q15058 1648 aa24.43■■□□□ 1.5
ALKBH3-212ENST00000534171 ZFYVE16Q7Z3T8 1539 aa24.43■■□□□ 1.5
ALKBH3-212ENST00000534171 CLIP1P30622 1438 aa24.43■■□□□ 1.5
ALKBH3-212ENST00000534171 LRRIQ1Q96JM4 1722 aa24.42■■□□□ 1.5
ALKBH3-212ENST00000534171 YEATS2Q9ULM3 1422 aa24.42■■□□□ 1.5
ALKBH3-212ENST00000534171 MADDQ8WXG6 1647 aa24.42■■□□□ 1.5
ALKBH3-212ENST00000534171 CASKIN1Q8WXD9 1431 aa24.41■■□□□ 1.5
ALKBH3-212ENST00000534171 CCDC18Q5T9S5 1454 aa24.38■■□□□ 1.49
ALKBH3-212ENST00000534171 PCF11O94913 1555 aaKnown RBP24.36■■□□□ 1.49
ALKBH3-212ENST00000534171 ARHGAP5Q13017 1502 aa24.35■■□□□ 1.49
ALKBH3-212ENST00000534171 SIGLEC1Q9BZZ2 1709 aa24.33■■□□□ 1.49
ALKBH3-212ENST00000534171 RIMS1Q86UR5 1692 aaKnown RBP24.33■■□□□ 1.49
ALKBH3-212ENST00000534171 ATP10AO60312 1499 aa24.32■■□□□ 1.48
ALKBH3-212ENST00000534171 ZNF518AQ6AHZ1 1483 aa24.32■■□□□ 1.48
ALKBH3-212ENST00000534171 FYCO1Q9BQS8 1478 aa24.31■■□□□ 1.48
ALKBH3-212ENST00000534171 CDC42BPBQ9Y5S2 1711 aa24.28■■□□□ 1.48
ALKBH3-212ENST00000534171 C9orf84Q5VXU9 1444 aa24.27■■□□□ 1.48
ALKBH3-212ENST00000534171 AFAP1Q8N556 730 aa24.27■■□□□ 1.48
ALKBH3-212ENST00000534171 KDM5CP41229 1560 aa24.27■■□□□ 1.48
ALKBH3-212ENST00000534171 LMTK3Q96Q04 1460 aa24.26■■□□□ 1.47
ALKBH3-212ENST00000534171 PREX2Q70Z35 1606 aa24.25■■□□□ 1.47
ALKBH3-212ENST00000534171 MLECQ14165 292 aa24.24■■□□□ 1.47
ALKBH3-212ENST00000534171 FER1L4A9Z1Z3 1794 aa24.21■■□□□ 1.47
ALKBH3-212ENST00000534171 ARHGEF12Q9NZN5 1544 aa24.21■■□□□ 1.47
ALKBH3-212ENST00000534171 ABCC1P33527 1531 aa24.2■■□□□ 1.46
ALKBH3-212ENST00000534171 MLH3Q9UHC1 1453 aa24.19■■□□□ 1.46
ALKBH3-212ENST00000534171 CDC42BPAQ5VT25 1732 aa24.18■■□□□ 1.46
ALKBH3-212ENST00000534171 MYT1LQ9UL68 1186 aa24.17■■□□□ 1.46
ALKBH3-212ENST00000534171 TRAPPC8Q9Y2L5 1435 aa24.17■■□□□ 1.46
ALKBH3-212ENST00000534171 DIP2CQ9Y2E4 1556 aa24.16■■□□□ 1.46
ALKBH3-212ENST00000534171 PLPPR3Q6T4P5 718 aa24.16■■□□□ 1.46
ALKBH3-212ENST00000534171 REREQ9P2R6 1566 aa24.16■■□□□ 1.46
ALKBH3-212ENST00000534171 ITSN2Q9NZM3 1697 aa24.15■■□□□ 1.46
ALKBH3-212ENST00000534171 GPATCH8Q9UKJ3 1502 aaKnown RBP24.12■■□□□ 1.45
ALKBH3-212ENST00000534171 ABCA6Q8N139 1617 aa24.12■■□□□ 1.45
ALKBH3-212ENST00000534171 HSPA2P54652 639 aa24.09■■□□□ 1.45
ALKBH3-212ENST00000534171 AGLP35573 1532 aa24.09■■□□□ 1.45
ALKBH3-212ENST00000534171 KIDINS220Q9ULH0 1771 aa24.07■■□□□ 1.44
ALKBH3-212ENST00000534171 ZNF777Q9ULD5 760 aaPredicted RBP24.07■■□□□ 1.44
ALKBH3-212ENST00000534171 SAMD9LQ8IVG5 1584 aa24.07■■□□□ 1.44
ALKBH3-212ENST00000534171 MTUS2Q5JR59 1369 aa24.06■■□□□ 1.44
ALKBH3-212ENST00000534171 FBXO41Q8TF61 875 aa24.06■■□□□ 1.44
ALKBH3-212ENST00000534171 SETD1BQ9UPS6 1966 aaKnown RBP24.05■■□□□ 1.44
ALKBH3-212ENST00000534171 CEBPAP49715 358 aaPredicted RBP24.05■■□□□ 1.44
ALKBH3-212ENST00000534171 KIAA1107Q9UPP5 1409 aa24.04■■□□□ 1.44
ALKBH3-212ENST00000534171 CFDP1Q9UEE9 299 aaPredicted RBP24.04■■□□□ 1.44
ALKBH3-212ENST00000534171 CCNB3Q8WWL7 1395 aa24.03■■□□□ 1.44
ALKBH3-212ENST00000534171 CEP162Q5TB80 1403 aa24.03■■□□□ 1.44
ALKBH3-212ENST00000534171 PLEKHH2Q8IVE3 1493 aa24.03■■□□□ 1.44
ALKBH3-212ENST00000534171 SYCP2Q9BX26 1530 aa24.03■■□□□ 1.44
ALKBH3-212ENST00000534171 PREX1Q8TCU6 1659 aa24.02■■□□□ 1.44
ALKBH3-212ENST00000534171 HNRNPMP52272 730 aaKnown RBP eCLIP24.01■■□□□ 1.43
ALKBH3-212ENST00000534171 SPAG9O60271 1321 aaKnown RBP24.01■■□□□ 1.43
ALKBH3-212ENST00000534171 ESF1Q9H501 851 aaKnown RBP23.98■■□□□ 1.43
ALKBH3-212ENST00000534171 EHBP1L1Q8N3D4 1523 aa23.97■■□□□ 1.43
ALKBH3-212ENST00000534171 UHRF1BP1Q6BDS2 1440 aa23.94■■□□□ 1.42
ALKBH3-212ENST00000534171 CNTLNQ9NXG0 1405 aa23.94■■□□□ 1.42
ALKBH3-212ENST00000534171 C3P01024 1663 aa23.94■■□□□ 1.42
ALKBH3-212ENST00000534171 ATP7AQ04656 1500 aa23.94■■□□□ 1.42
ALKBH3-212ENST00000534171 TIAM1Q13009 1591 aa23.93■■□□□ 1.42
ALKBH3-212ENST00000534171 INO80Q9ULG1 1556 aaPredicted RBP23.92■■□□□ 1.42
ALKBH3-212ENST00000534171 ZNF644Q9H582 1327 aaPredicted RBP23.88■■□□□ 1.41
ALKBH3-212ENST00000534171 A2MP01023 1474 aa23.87■■□□□ 1.41
ALKBH3-212ENST00000534171 SUPT6HQ7KZ85 1726 aaKnown RBP23.87■■□□□ 1.41
ALKBH3-212ENST00000534171 PLXNC1O60486 1568 aa23.87■■□□□ 1.41
ALKBH3-212ENST00000534171 MBD5Q9P267 1494 aa23.87■■□□□ 1.41
ALKBH3-212ENST00000534171 DMRT2Q9Y5R5 561 aa23.86■■□□□ 1.41
ALKBH3-212ENST00000534171 MROH2AA6NES4 1674 aa23.86■■□□□ 1.41
ALKBH3-212ENST00000534171 STRCQ7RTU9 1775 aa23.85■■□□□ 1.41
ALKBH3-212ENST00000534171 RTEL1-TNFRSF6BF6WH68 1400 aa23.83■■□□□ 1.4
ALKBH3-212ENST00000534171 NPATQ14207 1427 aa23.83■■□□□ 1.4
ALKBH3-212ENST00000534171 NCOA2Q15596 1464 aa23.82■■□□□ 1.4
ALKBH3-212ENST00000534171 ZMYM3Q14202 1370 aa23.82■■□□□ 1.4
ALKBH3-212ENST00000534171 ADGBQ8N7X0 1667 aa23.82■■□□□ 1.4
ALKBH3-212ENST00000534171 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
ALKBH3-212ENST00000534171 CERKQ8TCT0 537 aa23.81■■□□□ 1.4
ALKBH3-212ENST00000534171 PPP6R1Q9UPN7 881 aa23.8■■□□□ 1.4
ALKBH3-212ENST00000534171 VPS8Q8N3P4 1428 aa23.78■■□□□ 1.4
ALKBH3-212ENST00000534171 RSPH4AQ5TD94 716 aa23.77■■□□□ 1.4
ALKBH3-212ENST00000534171 GGT6Q6P531 493 aa23.77■■□□□ 1.4
ALKBH3-212ENST00000534171 CLTCQ00610 1675 aaKnown RBP23.76■■□□□ 1.39
ALKBH3-212ENST00000534171 PTPRTO14522 1441 aa23.76■■□□□ 1.39
ALKBH3-212ENST00000534171 CAMSAP2Q08AD1 1489 aa23.75■■□□□ 1.39
ALKBH3-212ENST00000534171 CCDC141Q6ZP82 1450 aa23.75■■□□□ 1.39
ALKBH3-212ENST00000534171 DHX29Q7Z478 1369 aaKnown RBP23.75■■□□□ 1.39
ALKBH3-212ENST00000534171 LRRC9Q6ZRR7 1453 aa23.73■■□□□ 1.39
ALKBH3-212ENST00000534171 NCOA1Q15788 1441 aa23.72■■□□□ 1.39
ALKBH3-212ENST00000534171 PTPRKQ15262 1439 aa23.7■■□□□ 1.38
ALKBH3-212ENST00000534171 MAP3K1Q13233 1512 aa23.69■■□□□ 1.38
ALKBH3-212ENST00000534171 ARHGEF5Q12774 1597 aa23.69■■□□□ 1.38
ALKBH3-212ENST00000534171 CAMSAP1Q5T5Y3 1602 aa23.66■■□□□ 1.38
ALKBH3-212ENST00000534171 KIF3BO15066 747 aa23.65■■□□□ 1.38
ALKBH3-212ENST00000534171 TSPY4P0CV99 314 aa23.65■■□□□ 1.38
ALKBH3-212ENST00000534171 TSPY10P0CW01 314 aa23.65■■□□□ 1.38
ALKBH3-212ENST00000534171 ZNF142P52746 1687 aaPredicted RBP23.64■■□□□ 1.38
ALKBH3-212ENST00000534171 MYO3AQ8NEV4 1616 aa23.64■■□□□ 1.38
ALKBH3-212ENST00000534171 KANK4Q5T7N3 995 aaPredicted RBP23.63■■□□□ 1.37
ALKBH3-212ENST00000534171 FAM135AQ9P2D6 1515 aa23.63■■□□□ 1.37
ALKBH3-212ENST00000534171 ILDR2Q71H61 639 aa23.62■■□□□ 1.37
ALKBH3-212ENST00000534171 CEP170BQ9Y4F5 1589 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms