RNA–Protein interactions for RNA: ENST00000534093.5

ROM1-205, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ROM1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-205ENST00000534093 ADGRL1O94910 1474 aa20.07■□□□□ 0.8
ROM1-205ENST00000534093 PREX2Q70Z35 1606 aa20.07■□□□□ 0.8
ROM1-205ENST00000534093 CDC42BPAQ5VT25 1732 aa20.07■□□□□ 0.8
ROM1-205ENST00000534093 TIAM1Q13009 1591 aa20.06■□□□□ 0.8
ROM1-205ENST00000534093 RICTORQ6R327 1708 aa20.06■□□□□ 0.8
ROM1-205ENST00000534093 SCAPERQ9BY12 1400 aa20.06■□□□□ 0.8
ROM1-205ENST00000534093 GPATCH8Q9UKJ3 1502 aaKnown RBP20.02■□□□□ 0.8
ROM1-205ENST00000534093 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
ROM1-205ENST00000534093 MAP3K1Q13233 1512 aa20■□□□□ 0.79
ROM1-205ENST00000534093 POGZQ7Z3K3 1410 aa20■□□□□ 0.79
ROM1-205ENST00000534093 LRRC9Q6ZRR7 1453 aa19.98■□□□□ 0.79
ROM1-205ENST00000534093 ZMYM4Q5VZL5 1548 aa19.97■□□□□ 0.79
ROM1-205ENST00000534093 SUPT6HQ7KZ85 1726 aaKnown RBP19.97■□□□□ 0.79
ROM1-205ENST00000534093 KDM4FA0A1W2PPD8 638 aa19.97■□□□□ 0.79
ROM1-205ENST00000534093 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
ROM1-205ENST00000534093 KANK4Q5T7N3 995 aaPredicted RBP19.96■□□□□ 0.79
ROM1-205ENST00000534093 CFDP1Q9UEE9 299 aaPredicted RBP19.96■□□□□ 0.79
ROM1-205ENST00000534093 ABCC1P33527 1531 aa19.96■□□□□ 0.79
ROM1-205ENST00000534093 NCOA2Q15596 1464 aa19.95■□□□□ 0.78
ROM1-205ENST00000534093 ARHGEF12Q9NZN5 1544 aa19.95■□□□□ 0.78
ROM1-205ENST00000534093 ZNF518AQ6AHZ1 1483 aa19.94■□□□□ 0.78
ROM1-205ENST00000534093 APLP2Q06481 763 aa19.94■□□□□ 0.78
ROM1-205ENST00000534093 AFAP1Q8N556 730 aa19.94■□□□□ 0.78
ROM1-205ENST00000534093 SAMD9LQ8IVG5 1584 aa19.94■□□□□ 0.78
ROM1-205ENST00000534093 MAGI2Q86UL8 1455 aa19.93■□□□□ 0.78
ROM1-205ENST00000534093 ARHGEF40Q8TER5 1519 aa19.93■□□□□ 0.78
ROM1-205ENST00000534093 ITSN2Q9NZM3 1697 aa19.93■□□□□ 0.78
ROM1-205ENST00000534093 ZFYVE16Q7Z3T8 1539 aa19.92■□□□□ 0.78
ROM1-205ENST00000534093 YEATS2Q9ULM3 1422 aa19.92■□□□□ 0.78
ROM1-205ENST00000534093 TRAPPC8Q9Y2L5 1435 aa19.92■□□□□ 0.78
ROM1-205ENST00000534093 KDM5CP41229 1560 aa19.91■□□□□ 0.78
ROM1-205ENST00000534093 SYCP2Q9BX26 1530 aa19.88■□□□□ 0.77
ROM1-205ENST00000534093 PLEKHH2Q8IVE3 1493 aa19.88■□□□□ 0.77
ROM1-205ENST00000534093 KIAA1107Q9UPP5 1409 aa19.88■□□□□ 0.77
ROM1-205ENST00000534093 HNRNPMP52272 730 aaKnown RBP eCLIP19.88■□□□□ 0.77
ROM1-205ENST00000534093 ZNF644Q9H582 1327 aaPredicted RBP19.87■□□□□ 0.77
ROM1-205ENST00000534093 MYT1LQ9UL68 1186 aa19.86■□□□□ 0.77
ROM1-205ENST00000534093 HECW2Q9P2P5 1572 aa19.86■□□□□ 0.77
ROM1-205ENST00000534093 ARID4BQ4LE39 1312 aaPredicted RBP19.85■□□□□ 0.77
ROM1-205ENST00000534093 MLH3Q9UHC1 1453 aa19.85■□□□□ 0.77
ROM1-205ENST00000534093 ATP10AO60312 1499 aa19.83■□□□□ 0.76
ROM1-205ENST00000534093 C9orf84Q5VXU9 1444 aa19.81■□□□□ 0.76
ROM1-205ENST00000534093 SIGLEC1Q9BZZ2 1709 aa19.81■□□□□ 0.76
ROM1-205ENST00000534093 KIDINS220Q9ULH0 1771 aa19.8■□□□□ 0.76
ROM1-205ENST00000534093 BCORL1Q5H9F3 1711 aa19.8■□□□□ 0.76
ROM1-205ENST00000534093 CAMSAP2Q08AD1 1489 aa19.79■□□□□ 0.76
ROM1-205ENST00000534093 MBD5Q9P267 1494 aa19.79■□□□□ 0.76
ROM1-205ENST00000534093 SPAG9O60271 1321 aaKnown RBP19.79■□□□□ 0.76
ROM1-205ENST00000534093 DIP2CQ9Y2E4 1556 aa19.79■□□□□ 0.76
ROM1-205ENST00000534093 MYOM3Q5VTT5 1437 aa19.79■□□□□ 0.76
ROM1-205ENST00000534093 ABCA6Q8N139 1617 aa19.79■□□□□ 0.76
ROM1-205ENST00000534093 ADAMTSL3P82987 1691 aa19.78■□□□□ 0.76
ROM1-205ENST00000534093 MIA2Q96PC5 1412 aa19.76■□□□□ 0.75
ROM1-205ENST00000534093 ATP7AQ04656 1500 aa19.74■□□□□ 0.75
ROM1-205ENST00000534093 REREQ9P2R6 1566 aa19.74■□□□□ 0.75
ROM1-205ENST00000534093 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
ROM1-205ENST00000534093 RSPH4AQ5TD94 716 aa19.73■□□□□ 0.75
ROM1-205ENST00000534093 CCDC141Q6ZP82 1450 aa19.73■□□□□ 0.75
ROM1-205ENST00000534093 MLECQ14165 292 aa19.72■□□□□ 0.75
ROM1-205ENST00000534093 MADDQ8WXG6 1647 aa19.72■□□□□ 0.75
ROM1-205ENST00000534093 ARHGEF5Q12774 1597 aa19.71■□□□□ 0.75
ROM1-205ENST00000534093 RTEL1-TNFRSF6BF6WH68 1400 aa19.69■□□□□ 0.74
ROM1-205ENST00000534093 AGLP35573 1532 aa19.68■□□□□ 0.74
ROM1-205ENST00000534093 FGD6Q6ZV73 1430 aa19.68■□□□□ 0.74
ROM1-205ENST00000534093 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
ROM1-205ENST00000534093 PTPRMP28827 1452 aa19.67■□□□□ 0.74
ROM1-205ENST00000534093 RIMS1Q86UR5 1692 aaKnown RBP19.66■□□□□ 0.74
ROM1-205ENST00000534093 TSPY4P0CV99 314 aa19.66■□□□□ 0.74
ROM1-205ENST00000534093 TSPY10P0CW01 314 aa19.66■□□□□ 0.74
ROM1-205ENST00000534093 A2MP01023 1474 aa19.65■□□□□ 0.74
ROM1-205ENST00000534093 FER1L4A9Z1Z3 1794 aa19.65■□□□□ 0.74
ROM1-205ENST00000534093 ADGBQ8N7X0 1667 aa19.64■□□□□ 0.73
ROM1-205ENST00000534093 TCOF1Q13428 1488 aaKnown RBP19.63■□□□□ 0.73
ROM1-205ENST00000534093 PLXNC1O60486 1568 aa19.62■□□□□ 0.73
ROM1-205ENST00000534093 ILDR1Q86SU0 546 aaPredicted RBP19.62■□□□□ 0.73
ROM1-205ENST00000534093 PPARGC1BQ86YN6 1023 aaKnown RBP19.62■□□□□ 0.73
ROM1-205ENST00000534093 MAST1Q9Y2H9 1570 aa19.61■□□□□ 0.73
ROM1-205ENST00000534093 DHX29Q7Z478 1369 aaKnown RBP19.59■□□□□ 0.73
ROM1-205ENST00000534093 ABCC5O15440 1437 aa19.58■□□□□ 0.72
ROM1-205ENST00000534093 DNMT1P26358 1616 aaKnown RBP19.56■□□□□ 0.72
ROM1-205ENST00000534093 PLPPR3Q6T4P5 718 aa19.56■□□□□ 0.72
ROM1-205ENST00000534093 DAPK1P53355 1430 aa19.56■□□□□ 0.72
ROM1-205ENST00000534093 CROCC2H7BZ55 1655 aa19.56■□□□□ 0.72
ROM1-205ENST00000534093 FAM50AQ14320 339 aaKnown RBP19.55■□□□□ 0.72
ROM1-205ENST00000534093 SHANK2Q9UPX8 1470 aa19.54■□□□□ 0.72
ROM1-205ENST00000534093 ESF1Q9H501 851 aaKnown RBP19.54■□□□□ 0.72
ROM1-205ENST00000534093 GGT6Q6P531 493 aa19.53■□□□□ 0.72
ROM1-205ENST00000534093 KIF3BO15066 747 aa19.51■□□□□ 0.71
ROM1-205ENST00000534093 CEBPAP49715 358 aaPredicted RBP19.51■□□□□ 0.71
ROM1-205ENST00000534093 CNTLNQ9NXG0 1405 aa19.51■□□□□ 0.71
ROM1-205ENST00000534093 CHIC2Q9UKJ5 165 aa19.49■□□□□ 0.71
ROM1-205ENST00000534093 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
ROM1-205ENST00000534093 KIF15Q9NS87 1388 aa19.47■□□□□ 0.71
ROM1-205ENST00000534093 C3P01024 1663 aa19.47■□□□□ 0.71
ROM1-205ENST00000534093 RRP7BPQ9NSQ0 103 aa19.47■□□□□ 0.71
ROM1-205ENST00000534093 CLTCQ00610 1675 aaKnown RBP19.46■□□□□ 0.71
ROM1-205ENST00000534093 DUOX2Q9NRD8 1548 aa19.46■□□□□ 0.71
ROM1-205ENST00000534093 MROH2AA6NES4 1674 aa19.46■□□□□ 0.71
ROM1-205ENST00000534093 ANKRD30AQ9BXX3 1397 aa19.45■□□□□ 0.7
ROM1-205ENST00000534093 ZMYM3Q14202 1370 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms