RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 ARHGAP5Q13017 1502 aa28.62■■■□□ 2.17
AP003555.3-201ENST00000534086 POGZQ7Z3K3 1410 aa28.61■■■□□ 2.17
AP003555.3-201ENST00000534086 MAGI2Q86UL8 1455 aa28.6■■■□□ 2.17
AP003555.3-201ENST00000534086 ZFYVE16Q7Z3T8 1539 aa28.59■■■□□ 2.17
AP003555.3-201ENST00000534086 ADAMTSL3P82987 1691 aa28.58■■■□□ 2.17
AP003555.3-201ENST00000534086 YEATS2Q9ULM3 1422 aa28.58■■■□□ 2.17
AP003555.3-201ENST00000534086 BCORL1Q5H9F3 1711 aa28.56■■■□□ 2.16
AP003555.3-201ENST00000534086 CDC42BPBQ9Y5S2 1711 aa28.54■■■□□ 2.16
AP003555.3-201ENST00000534086 CEP162Q5TB80 1403 aa28.53■■■□□ 2.16
AP003555.3-201ENST00000534086 AFAP1Q8N556 730 aa28.51■■■□□ 2.15
AP003555.3-201ENST00000534086 PTPRMP28827 1452 aa28.51■■■□□ 2.15
AP003555.3-201ENST00000534086 ZNF518AQ6AHZ1 1483 aa28.51■■■□□ 2.15
AP003555.3-201ENST00000534086 PREX2Q70Z35 1606 aa28.5■■■□□ 2.15
AP003555.3-201ENST00000534086 HECW2Q9P2P5 1572 aa28.48■■■□□ 2.15
AP003555.3-201ENST00000534086 MADDQ8WXG6 1647 aa28.47■■■□□ 2.15
AP003555.3-201ENST00000534086 MYT1LQ9UL68 1186 aa28.46■■■□□ 2.15
AP003555.3-201ENST00000534086 ATP10AO60312 1499 aa28.46■■■□□ 2.15
AP003555.3-201ENST00000534086 LOC105371045A0A1W2PR82 267 aa28.45■■■□□ 2.14
AP003555.3-201ENST00000534086 CDC42BPAQ5VT25 1732 aa28.45■■■□□ 2.14
AP003555.3-201ENST00000534086 MTUS2Q5JR59 1369 aa28.44■■■□□ 2.14
AP003555.3-201ENST00000534086 SIGLEC1Q9BZZ2 1709 aa28.43■■■□□ 2.14
AP003555.3-201ENST00000534086 KDM5CP41229 1560 aa28.42■■■□□ 2.14
AP003555.3-201ENST00000534086 MLECQ14165 292 aa28.42■■■□□ 2.14
AP003555.3-201ENST00000534086 ZNF777Q9ULD5 760 aaPredicted RBP28.41■■■□□ 2.14
AP003555.3-201ENST00000534086 C9orf84Q5VXU9 1444 aa28.41■■■□□ 2.14
AP003555.3-201ENST00000534086 ABCC1P33527 1531 aa28.4■■■□□ 2.14
AP003555.3-201ENST00000534086 ARHGEF12Q9NZN5 1544 aa28.39■■■□□ 2.14
AP003555.3-201ENST00000534086 GPATCH8Q9UKJ3 1502 aaKnown RBP28.39■■■□□ 2.14
AP003555.3-201ENST00000534086 TRAPPC8Q9Y2L5 1435 aa28.39■■■□□ 2.14
AP003555.3-201ENST00000534086 RIMS1Q86UR5 1692 aaKnown RBP28.38■■■□□ 2.13
AP003555.3-201ENST00000534086 CCNB3Q8WWL7 1395 aa28.37■■■□□ 2.13
AP003555.3-201ENST00000534086 ITSN2Q9NZM3 1697 aa28.35■■■□□ 2.13
AP003555.3-201ENST00000534086 MLH3Q9UHC1 1453 aa28.35■■■□□ 2.13
AP003555.3-201ENST00000534086 CFDP1Q9UEE9 299 aaPredicted RBP28.35■■■□□ 2.13
AP003555.3-201ENST00000534086 PLPPR3Q6T4P5 718 aa28.31■■■□□ 2.12
AP003555.3-201ENST00000534086 SAMD9LQ8IVG5 1584 aa28.31■■■□□ 2.12
AP003555.3-201ENST00000534086 DIP2CQ9Y2E4 1556 aa28.3■■■□□ 2.12
AP003555.3-201ENST00000534086 HNRNPMP52272 730 aaKnown RBP eCLIP28.3■■■□□ 2.12
AP003555.3-201ENST00000534086 EHBP1L1Q8N3D4 1523 aa28.29■■■□□ 2.12
AP003555.3-201ENST00000534086 FER1L4A9Z1Z3 1794 aa28.27■■■□□ 2.12
AP003555.3-201ENST00000534086 ABCA6Q8N139 1617 aa28.27■■■□□ 2.12
AP003555.3-201ENST00000534086 SYCP2Q9BX26 1530 aa28.27■■■□□ 2.12
AP003555.3-201ENST00000534086 PLEKHH2Q8IVE3 1493 aa28.25■■■□□ 2.11
AP003555.3-201ENST00000534086 KIAA1107Q9UPP5 1409 aa28.25■■■□□ 2.11
AP003555.3-201ENST00000534086 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
AP003555.3-201ENST00000534086 KIDINS220Q9ULH0 1771 aa28.24■■■□□ 2.11
AP003555.3-201ENST00000534086 SPAG9O60271 1321 aaKnown RBP28.23■■■□□ 2.11
AP003555.3-201ENST00000534086 VPS8Q8N3P4 1428 aa28.22■■■□□ 2.11
AP003555.3-201ENST00000534086 TIAM1Q13009 1591 aa28.21■■■□□ 2.11
AP003555.3-201ENST00000534086 LMTK3Q96Q04 1460 aa28.18■■■□□ 2.1
AP003555.3-201ENST00000534086 AGLP35573 1532 aa28.18■■■□□ 2.1
AP003555.3-201ENST00000534086 ZNF644Q9H582 1327 aaPredicted RBP28.18■■■□□ 2.1
AP003555.3-201ENST00000534086 SUPT6HQ7KZ85 1726 aaKnown RBP28.15■■■□□ 2.1
AP003555.3-201ENST00000534086 CEBPAP49715 358 aaPredicted RBP28.14■■■□□ 2.1
AP003555.3-201ENST00000534086 NCOA2Q15596 1464 aa28.14■■■□□ 2.09
AP003555.3-201ENST00000534086 ESF1Q9H501 851 aaKnown RBP28.13■■■□□ 2.09
AP003555.3-201ENST00000534086 ATP7AQ04656 1500 aa28.12■■■□□ 2.09
AP003555.3-201ENST00000534086 HSPA2P54652 639 aa28.09■■■□□ 2.09
AP003555.3-201ENST00000534086 LRRC9Q6ZRR7 1453 aa28.08■■■□□ 2.09
AP003555.3-201ENST00000534086 MBD5Q9P267 1494 aa28.08■■■□□ 2.09
AP003555.3-201ENST00000534086 INO80Q9ULG1 1556 aaPredicted RBP28.07■■■□□ 2.08
AP003555.3-201ENST00000534086 MAP3K1Q13233 1512 aa28.03■■■□□ 2.08
AP003555.3-201ENST00000534086 A2MP01023 1474 aa28.03■■■□□ 2.08
AP003555.3-201ENST00000534086 KANK4Q5T7N3 995 aaPredicted RBP28.03■■■□□ 2.08
AP003555.3-201ENST00000534086 CAMSAP2Q08AD1 1489 aa28.01■■■□□ 2.07
AP003555.3-201ENST00000534086 CNTLNQ9NXG0 1405 aa28.01■■■□□ 2.07
AP003555.3-201ENST00000534086 RSPH4AQ5TD94 716 aa28■■■□□ 2.07
AP003555.3-201ENST00000534086 RTEL1-TNFRSF6BF6WH68 1400 aa28■■■□□ 2.07
AP003555.3-201ENST00000534086 SETD1BQ9UPS6 1966 aaKnown RBP27.99■■■□□ 2.07
AP003555.3-201ENST00000534086 C3P01024 1663 aa27.98■■■□□ 2.07
AP003555.3-201ENST00000534086 PREX1Q8TCU6 1659 aa27.98■■■□□ 2.07
AP003555.3-201ENST00000534086 ILDR1Q86SU0 546 aaPredicted RBP27.98■■■□□ 2.07
AP003555.3-201ENST00000534086 PLXNC1O60486 1568 aa27.98■■■□□ 2.07
AP003555.3-201ENST00000534086 CCDC141Q6ZP82 1450 aa27.96■■■□□ 2.07
AP003555.3-201ENST00000534086 APLP2Q06481 763 aa27.96■■■□□ 2.07
AP003555.3-201ENST00000534086 ADGBQ8N7X0 1667 aa27.96■■■□□ 2.07
AP003555.3-201ENST00000534086 GGT6Q6P531 493 aa27.95■■■□□ 2.06
AP003555.3-201ENST00000534086 UHRF1BP1Q6BDS2 1440 aa27.94■■■□□ 2.06
AP003555.3-201ENST00000534086 ZMYM3Q14202 1370 aa27.91■■■□□ 2.06
AP003555.3-201ENST00000534086 TSPY4P0CV99 314 aa27.91■■■□□ 2.06
AP003555.3-201ENST00000534086 TSPY10P0CW01 314 aa27.91■■■□□ 2.06
AP003555.3-201ENST00000534086 DHX29Q7Z478 1369 aaKnown RBP27.9■■■□□ 2.06
AP003555.3-201ENST00000534086 ARHGEF5Q12774 1597 aa27.89■■■□□ 2.05
AP003555.3-201ENST00000534086 MROH2AA6NES4 1674 aa27.88■■■□□ 2.05
AP003555.3-201ENST00000534086 PPP6R1Q9UPN7 881 aa27.88■■■□□ 2.05
AP003555.3-201ENST00000534086 MYOM3Q5VTT5 1437 aa27.87■■■□□ 2.05
AP003555.3-201ENST00000534086 MIA2Q96PC5 1412 aa27.85■■■□□ 2.05
AP003555.3-201ENST00000534086 CLTCQ00610 1675 aaKnown RBP27.84■■■□□ 2.05
AP003555.3-201ENST00000534086 KIF3BO15066 747 aa27.84■■■□□ 2.05
AP003555.3-201ENST00000534086 NPATQ14207 1427 aa27.83■■■□□ 2.05
AP003555.3-201ENST00000534086 DMRT2Q9Y5R5 561 aa27.78■■■□□ 2.04
AP003555.3-201ENST00000534086 STRCQ7RTU9 1775 aa27.75■■■□□ 2.03
AP003555.3-201ENST00000534086 PTPRKQ15262 1439 aa27.75■■■□□ 2.03
AP003555.3-201ENST00000534086 MAST1Q9Y2H9 1570 aa27.74■■■□□ 2.03
AP003555.3-201ENST00000534086 FBXO41Q8TF61 875 aa27.74■■■□□ 2.03
AP003555.3-201ENST00000534086 WASHC2CQ9Y4E1 1318 aa27.7■■■□□ 2.03
AP003555.3-201ENST00000534086 PTPN23Q9H3S7 1636 aa27.67■■■□□ 2.02
AP003555.3-201ENST00000534086 KDM5DQ9BY66 1539 aa27.67■■■□□ 2.02
AP003555.3-201ENST00000534086 FAM135AQ9P2D6 1515 aa27.66■■■□□ 2.02
AP003555.3-201ENST00000534086 FGD6Q6ZV73 1430 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms