RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TMEM92Q6UXU6 159 aa10.76□□□□□ -0.69
ITGB1-219ENST00000534049 KIF3CO14782 793 aa10.73□□□□□ -0.69
ITGB1-219ENST00000534049 ZNF710Q8N1W2 664 aa10.72□□□□□ -0.69
ITGB1-219ENST00000534049 SPRYD3Q8NCJ5 442 aa10.72□□□□□ -0.69
ITGB1-219ENST00000534049 ZSWIM6Q9HCJ5 1215 aa10.72□□□□□ -0.69
ITGB1-219ENST00000534049 C2orf72A6NCS6 295 aa10.71□□□□□ -0.69
ITGB1-219ENST00000534049 ST18O60284 1047 aa10.71□□□□□ -0.69
ITGB1-219ENST00000534049 HOXB3P14651 431 aaPredicted RBP10.69□□□□□ -0.7
ITGB1-219ENST00000534049 GPHNQ9NQX3 736 aaPredicted RBP10.69□□□□□ -0.7
ITGB1-219ENST00000534049 LCE2DQ5TA82 110 aaPredicted RBP10.68□□□□□ -0.7
ITGB1-219ENST00000534049 POTEMA6NI47 508 aa10.67□□□□□ -0.7
ITGB1-219ENST00000534049 FOXK1P85037 733 aa10.66□□□□□ -0.7
ITGB1-219ENST00000534049 POTEGQ6S5H5 508 aa10.66□□□□□ -0.7
ITGB1-219ENST00000534049 PDE4AP27815 886 aa10.65□□□□□ -0.7
ITGB1-219ENST00000534049 SLC34A2O95436 690 aa10.64□□□□□ -0.71
ITGB1-219ENST00000534049 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
ITGB1-219ENST00000534049 HOXB1P14653 301 aaPredicted RBP10.63□□□□□ -0.71
ITGB1-219ENST00000534049 PCDH10Q9P2E7 1040 aa10.63□□□□□ -0.71
ITGB1-219ENST00000534049 PAXIP1Q6ZW49 1069 aaPredicted RBP10.62□□□□□ -0.71
ITGB1-219ENST00000534049 EMP3P54852 163 aa10.6□□□□□ -0.71
ITGB1-219ENST00000534049 CFAP44Q96MT7 982 aa10.6□□□□□ -0.71
ITGB1-219ENST00000534049 PLPP6Q8IY26 295 aa10.59□□□□□ -0.71
ITGB1-219ENST00000534049 DSG2Q14126 1118 aa10.58□□□□□ -0.72
ITGB1-219ENST00000534049 PPP1R15BQ5SWA1 713 aa10.57□□□□□ -0.72
ITGB1-219ENST00000534049 NCKAP5LQ9HCH0 1330 aa10.57□□□□□ -0.72
ITGB1-219ENST00000534049 GPR153Q6NV75 609 aa10.56□□□□□ -0.72
ITGB1-219ENST00000534049 DDX27Q96GQ7 796 aaKnown RBP10.56□□□□□ -0.72
ITGB1-219ENST00000534049 TBC1D12O60347 775 aa10.55□□□□□ -0.72
ITGB1-219ENST00000534049 MFSD10Q14728 455 aa10.55□□□□□ -0.72
ITGB1-219ENST00000534049 MARVELD3Q96A59 401 aa10.55□□□□□ -0.72
ITGB1-219ENST00000534049 LARP6Q9BRS8 491 aaKnown RBP10.55□□□□□ -0.72
ITGB1-219ENST00000534049 PTCD2Q8WV60 388 aaKnown RBP10.54□□□□□ -0.72
ITGB1-219ENST00000534049 PCDHGA4Q9Y5G9 962 aa10.52□□□□□ -0.73
ITGB1-219ENST00000534049 ARSIQ5FYB1 569 aa10.51□□□□□ -0.73
ITGB1-219ENST00000534049 ERBB3P21860 1342 aa10.51□□□□□ -0.73
ITGB1-219ENST00000534049 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
ITGB1-219ENST00000534049 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
ITGB1-219ENST00000534049 HS3ST6Q96QI5 342 aa10.48□□□□□ -0.73
ITGB1-219ENST00000534049 PSDA5PKW4 1024 aaPredicted RBP10.47□□□□□ -0.73
ITGB1-219ENST00000534049 ZNF316A6NFI3 1004 aaPredicted RBP10.47□□□□□ -0.73
ITGB1-219ENST00000534049 CDAN1Q8IWY9 1227 aa10.47□□□□□ -0.73
ITGB1-219ENST00000534049 OXER1Q8TDS5 423 aa10.46□□□□□ -0.73
ITGB1-219ENST00000534049 PLSCR2Q9NRY7 297 aa10.45□□□□□ -0.74
ITGB1-219ENST00000534049 NUDT7P0C024 238 aa10.44□□□□□ -0.74
ITGB1-219ENST00000534049 VARS2Q5ST30 1063 aaKnown RBP10.43□□□□□ -0.74
ITGB1-219ENST00000534049 WDR70Q9NW82 654 aa10.43□□□□□ -0.74
ITGB1-219ENST00000534049 PLCB2Q00722 1185 aa10.42□□□□□ -0.74
ITGB1-219ENST00000534049 UPF1Q92900 1129 aaKnown RBP eCLIP10.41□□□□□ -0.74
ITGB1-219ENST00000534049 KHSRPQ92945 711 aaKnown RBP eCLIP10.41□□□□□ -0.744e-6■■□□□ 14.1
ITGB1-219ENST00000534049 CAMK2BQ13554 666 aa10.4□□□□□ -0.74
ITGB1-219ENST00000534049 KDM4FA0A1W2PPD8 638 aa10.39□□□□□ -0.75
ITGB1-219ENST00000534049 ZNF687Q8N1G0 1237 aa10.39□□□□□ -0.75
ITGB1-219ENST00000534049 MAP3K9P80192 1104 aa10.38□□□□□ -0.75
ITGB1-219ENST00000534049 LHX6Q9UPM6 363 aa10.38□□□□□ -0.75
ITGB1-219ENST00000534049 POTEB3A0JP26 581 aa10.36□□□□□ -0.75
ITGB1-219ENST00000534049 PBX2P40425 430 aa10.36□□□□□ -0.75
ITGB1-219ENST00000534049 POTEBQ6S5H4 581 aa10.36□□□□□ -0.75
ITGB1-219ENST00000534049 E2F4Q16254 413 aa10.35□□□□□ -0.75
ITGB1-219ENST00000534049 PPP4R3BQ5MIZ7 849 aa10.34□□□□□ -0.75
ITGB1-219ENST00000534049 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
ITGB1-219ENST00000534049 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
ITGB1-219ENST00000534049 EVI5O60447 810 aa10.33□□□□□ -0.76
ITGB1-219ENST00000534049 ANO8Q9HCE9 1232 aaPredicted RBP10.33□□□□□ -0.76
ITGB1-219ENST00000534049 ARIH1Q9Y4X5 557 aaPredicted RBP10.31□□□□□ -0.76
ITGB1-219ENST00000534049 KCNH8Q96L42 1107 aa10.3□□□□□ -0.76
ITGB1-219ENST00000534049 JPH4Q96JJ6 628 aa10.29□□□□□ -0.76
ITGB1-219ENST00000534049 SPDYE16A6NNV3 312 aaPredicted RBP10.28□□□□□ -0.76
ITGB1-219ENST00000534049 KRTAP3-3Q9BYR6 98 aa10.28□□□□□ -0.76
ITGB1-219ENST00000534049 KRTAP3-2Q9BYR7 98 aa10.28□□□□□ -0.76
ITGB1-219ENST00000534049 DPYSL4O14531 572 aa10.27□□□□□ -0.77
ITGB1-219ENST00000534049 FOSBP53539 338 aa10.26□□□□□ -0.77
ITGB1-219ENST00000534049 ZNF454Q8N9F8 522 aa10.26□□□□□ -0.77
ITGB1-219ENST00000534049 PDIA6Q15084 440 aa10.25□□□□□ -0.77
ITGB1-219ENST00000534049 P3H3Q8IVL6 736 aa10.25□□□□□ -0.77
ITGB1-219ENST00000534049 ARHGAP33O14559 1287 aa10.24□□□□□ -0.77
ITGB1-219ENST00000534049 PTGER2P43116 358 aa10.24□□□□□ -0.77
ITGB1-219ENST00000534049 HAP1P54257 671 aaPredicted RBP10.23□□□□□ -0.77
ITGB1-219ENST00000534049 FBXW7Q969H0 707 aa10.23□□□□□ -0.77
ITGB1-219ENST00000534049 PHF14O94880 888 aa10.22□□□□□ -0.77
ITGB1-219ENST00000534049 LSM11P83369 360 aaKnown RBP eCLIP10.22□□□□□ -0.77
ITGB1-219ENST00000534049 ZDHHC16Q969W1 377 aa10.22□□□□□ -0.77
ITGB1-219ENST00000534049 BCL2L12Q9HB09 334 aa10.22□□□□□ -0.77
ITGB1-219ENST00000534049 ARHGEF1Q92888 912 aaKnown RBP10.21□□□□□ -0.77
ITGB1-219ENST00000534049 EPAS1Q99814 870 aa10.21□□□□□ -0.77
ITGB1-219ENST00000534049 TYW1BQ6NUM6 668 aa10.2□□□□□ -0.78
ITGB1-219ENST00000534049 PTPREP23469 700 aa10.19□□□□□ -0.78
ITGB1-219ENST00000534049 SPNS2Q8IVW8 549 aa10.19□□□□□ -0.78
ITGB1-219ENST00000534049 TK2O00142 265 aa10.17□□□□□ -0.78
ITGB1-219ENST00000534049 PCDHGA10Q9Y5H3 936 aa10.17□□□□□ -0.78
ITGB1-219ENST00000534049 ANKRD13DQ6ZTN6 518 aa10.16□□□□□ -0.78
ITGB1-219ENST00000534049 KCNK17Q96T54 332 aa10.16□□□□□ -0.78
ITGB1-219ENST00000534049 POTEEQ6S8J3 1075 aa10.15□□□□□ -0.78
ITGB1-219ENST00000534049 AXIN2Q9Y2T1 843 aa10.15□□□□□ -0.78
ITGB1-219ENST00000534049 VSIG10Q8N0Z9 540 aa10.14□□□□□ -0.79
ITGB1-219ENST00000534049 KCNV2Q8TDN2 545 aa10.14□□□□□ -0.79
ITGB1-219ENST00000534049 SLC4A5Q9BY07 1137 aa10.13□□□□□ -0.79
ITGB1-219ENST00000534049 PSEN2P49810 448 aa10.12□□□□□ -0.79
ITGB1-219ENST00000534049 DDX12PQ92771 950 aa10.12□□□□□ -0.79
ITGB1-219ENST00000534049 ADAM33Q9BZ11 813 aa10.12□□□□□ -0.79
ITGB1-219ENST00000534049 MMRN1Q13201 1228 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms