RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
RDX-215ENST00000533961 RIOK3O14730 519 aaKnown RBP11.08□□□□□ -0.64
RDX-215ENST00000533961 MS4A4AQ96JQ5 239 aa11.08□□□□□ -0.64
RDX-215ENST00000533961 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
RDX-215ENST00000533961 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
RDX-215ENST00000533961 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.04□□□□□ -0.64
RDX-215ENST00000533961 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
RDX-215ENST00000533961 LSM11P83369 360 aaKnown RBP eCLIP11.04□□□□□ -0.64
RDX-215ENST00000533961 ZFP91Q96JP5 570 aaPredicted RBP11.04□□□□□ -0.64
RDX-215ENST00000533961 NLRP6P59044 892 aa11□□□□□ -0.65
RDX-215ENST00000533961 KHSRPQ92945 711 aaKnown RBP eCLIP10.99□□□□□ -0.65
RDX-215ENST00000533961 PBX2P40425 430 aa10.98□□□□□ -0.65
RDX-215ENST00000533961 RNF25Q96BH1 459 aaPredicted RBP10.98□□□□□ -0.65
RDX-215ENST00000533961 TAOK2Q9UL54 1235 aa10.94□□□□□ -0.66
RDX-215ENST00000533961 FBXO22Q8NEZ5 403 aa10.92□□□□□ -0.66
RDX-215ENST00000533961 NUDT7P0C024 238 aa10.91□□□□□ -0.66
RDX-215ENST00000533961 HCSTQ9UBK5 93 aa10.91□□□□□ -0.66
RDX-215ENST00000533961 PLA2G2EQ9NZK7 142 aa10.9□□□□□ -0.66
RDX-215ENST00000533961 KIF3CO14782 793 aa10.89□□□□□ -0.67
RDX-215ENST00000533961 C2orf72A6NCS6 295 aa10.88□□□□□ -0.67
RDX-215ENST00000533961 BCL11BQ9C0K0 894 aaPredicted RBP10.88□□□□□ -0.67
RDX-215ENST00000533961 LHX6Q9UPM6 363 aa10.88□□□□□ -0.67
RDX-215ENST00000533961 SLC34A2O95436 690 aa10.87□□□□□ -0.67
RDX-215ENST00000533961 AXIN2Q9Y2T1 843 aa10.86□□□□□ -0.67
RDX-215ENST00000533961 PCDHGA4Q9Y5G9 962 aa10.86□□□□□ -0.67
RDX-215ENST00000533961 POTEEQ6S8J3 1075 aa10.85□□□□□ -0.67
RDX-215ENST00000533961 STK24Q9Y6E0 443 aa10.84□□□□□ -0.67
RDX-215ENST00000533961 MFRPQ9BY79 579 aa10.83□□□□□ -0.68
RDX-215ENST00000533961 PSDA5PKW4 1024 aaPredicted RBP10.82□□□□□ -0.68
RDX-215ENST00000533961 ADGRD1Q6QNK2 874 aa10.81□□□□□ -0.68
RDX-215ENST00000533961 TMC2Q8TDI7 906 aa10.81□□□□□ -0.68
RDX-215ENST00000533961 ARHGAP33O14559 1287 aa10.8□□□□□ -0.68
RDX-215ENST00000533961 STK25O00506 426 aa10.77□□□□□ -0.69
RDX-215ENST00000533961 TK2O00142 265 aa10.75□□□□□ -0.69
RDX-215ENST00000533961 STAC3Q96MF2 364 aa10.71□□□□□ -0.69
RDX-215ENST00000533961 HRO43593 1189 aa10.7□□□□□ -0.7
RDX-215ENST00000533961 PTCD2Q8WV60 388 aaKnown RBP10.68□□□□□ -0.7
RDX-215ENST00000533961 KDM4FA0A1W2PPD8 638 aa10.67□□□□□ -0.7
RDX-215ENST00000533961 DMRTA1Q5VZB9 504 aa10.67□□□□□ -0.7
RDX-215ENST00000533961 PSEN2P49810 448 aa10.66□□□□□ -0.7
RDX-215ENST00000533961 KCTD12Q96CX2 325 aaKnown RBP10.66□□□□□ -0.7
RDX-215ENST00000533961 PPP4R3BQ5MIZ7 849 aa10.65□□□□□ -0.7
RDX-215ENST00000533961 KCNH8Q96L42 1107 aa10.64□□□□□ -0.71
RDX-215ENST00000533961 ECM2O94769 699 aaPredicted RBP10.63□□□□□ -0.71
RDX-215ENST00000533961 TBC1D12O60347 775 aa10.62□□□□□ -0.71
RDX-215ENST00000533961 RGS20O76081 388 aa10.6□□□□□ -0.71
RDX-215ENST00000533961 FOXK1P85037 733 aa10.6□□□□□ -0.71
RDX-215ENST00000533961 PPP1R37O75864 691 aa10.59□□□□□ -0.71
RDX-215ENST00000533961 PLPP6Q8IY26 295 aa10.59□□□□□ -0.71
RDX-215ENST00000533961 KCNK17Q96T54 332 aa10.57□□□□□ -0.72
RDX-215ENST00000533961 PTPN5P54829 565 aa10.55□□□□□ -0.72
RDX-215ENST00000533961 IFFO2Q5TF58 517 aa10.55□□□□□ -0.72
RDX-215ENST00000533961 GPHNQ9NQX3 736 aaPredicted RBP10.55□□□□□ -0.72
RDX-215ENST00000533961 VPS9D1Q9Y2B5 631 aa10.54□□□□□ -0.72
RDX-215ENST00000533961 RGL2O15211 777 aa10.52□□□□□ -0.73
RDX-215ENST00000533961 IRX2Q9BZI1 471 aaPredicted RBP10.51□□□□□ -0.73
RDX-215ENST00000533961 DSG2Q14126 1118 aa10.5□□□□□ -0.73
RDX-215ENST00000533961 SLC4A5Q9BY07 1137 aa10.49□□□□□ -0.73
RDX-215ENST00000533961 GOLGA8CPA6NN73 597 aa10.46□□□□□ -0.73
RDX-215ENST00000533961 THSD4Q6ZMP0 1018 aa10.46□□□□□ -0.73
RDX-215ENST00000533961 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.73
RDX-215ENST00000533961 A0A0G2JS52 829 aa10.45□□□□□ -0.74
RDX-215ENST00000533961 PKD2Q13563 968 aa10.45□□□□□ -0.74
RDX-215ENST00000533961 ZNF454Q8N9F8 522 aa10.45□□□□□ -0.74
RDX-215ENST00000533961 BHMG1C9JSJ3 638 aaPredicted RBP10.43□□□□□ -0.74
RDX-215ENST00000533961 OXER1Q8TDS5 423 aa10.43□□□□□ -0.74
RDX-215ENST00000533961 PTPREP23469 700 aa10.42□□□□□ -0.74
RDX-215ENST00000533961 WNT2BQ93097 391 aa10.42□□□□□ -0.74
RDX-215ENST00000533961 MRPL50Q8N5N7 158 aaKnown RBP10.41□□□□□ -0.74
RDX-215ENST00000533961 UPF1Q92900 1129 aaKnown RBP eCLIP10.39□□□□□ -0.75
RDX-215ENST00000533961 FOSBP53539 338 aa10.38□□□□□ -0.75
RDX-215ENST00000533961 ZBED2Q9BTP6 218 aa10.38□□□□□ -0.75
RDX-215ENST00000533961 NBPF3Q9H094 633 aa10.37□□□□□ -0.75
RDX-215ENST00000533961 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
RDX-215ENST00000533961 JPH4Q96JJ6 628 aa10.32□□□□□ -0.76
RDX-215ENST00000533961 ANO8Q9HCE9 1232 aaPredicted RBP10.32□□□□□ -0.76
RDX-215ENST00000533961 PPP1R15BQ5SWA1 713 aa10.31□□□□□ -0.76
RDX-215ENST00000533961 ZDHHC16Q969W1 377 aa10.31□□□□□ -0.76
RDX-215ENST00000533961 CRISPLD2Q9H0B8 497 aa10.3□□□□□ -0.76
RDX-215ENST00000533961 RYDENQ9NUL5 291 aaKnown RBP10.29□□□□□ -0.76
RDX-215ENST00000533961 ADAM33Q9BZ11 813 aa10.28□□□□□ -0.76
RDX-215ENST00000533961 EVI5O60447 810 aa10.27□□□□□ -0.77
RDX-215ENST00000533961 ITGBL1O95965 494 aaPredicted RBP10.27□□□□□ -0.77
RDX-215ENST00000533961 ANKK1Q8NFD2 765 aa10.27□□□□□ -0.77
RDX-215ENST00000533961 Q6ZNB5 142 aa10.26□□□□□ -0.77
RDX-215ENST00000533961 PDE4AP27815 886 aa10.25□□□□□ -0.77
RDX-215ENST00000533961 RABGEF1Q9UJ41 708 aa10.25□□□□□ -0.77
RDX-215ENST00000533961 CHGAP10645 457 aaKnown RBP10.23□□□□□ -0.77
RDX-215ENST00000533961 NYAP1Q6ZVC0 841 aa10.23□□□□□ -0.77
RDX-215ENST00000533961 PPP1R3GB7ZBB8 358 aa10.22□□□□□ -0.77
RDX-215ENST00000533961 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
RDX-215ENST00000533961 LAPTM4BQ86VI4 370 aa10.2□□□□□ -0.78
RDX-215ENST00000533961 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
RDX-215ENST00000533961 NCKAP5LQ9HCH0 1330 aa10.18□□□□□ -0.78
RDX-215ENST00000533961 SOWAHBA6NEL2 793 aa10.18□□□□□ -0.78
RDX-215ENST00000533961 BCAMP50895 628 aa10.18□□□□□ -0.78
RDX-215ENST00000533961 KCNC4Q03721 635 aa10.18□□□□□ -0.78
RDX-215ENST00000533961 LAPTM4AQ15012 233 aa10.17□□□□□ -0.78
RDX-215ENST00000533961 PROX2Q3B8N5 592 aa10.17□□□□□ -0.78
RDX-215ENST00000533961 NKX1-1Q15270 411 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms