RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 CDC42BPAQ5VT25 1732 aa24.2■■□□□ 1.46
CTTN-215ENST00000533931 EFCAB2Q5VUJ9 269 aa24.18■■□□□ 1.46
CTTN-215ENST00000533931 ARHGAP5Q13017 1502 aa24.18■■□□□ 1.46
CTTN-215ENST00000533931 MYOM3Q5VTT5 1437 aa24.17■■□□□ 1.46
CTTN-215ENST00000533931 MIA2Q96PC5 1412 aa24.17■■□□□ 1.46
CTTN-215ENST00000533931 CDC42BPBQ9Y5S2 1711 aa24.15■■□□□ 1.46
CTTN-215ENST00000533931 TSPOAP1O95153 1857 aa24.15■■□□□ 1.46
CTTN-215ENST00000533931 CFDP1Q9UEE9 299 aaPredicted RBP24.13■■□□□ 1.45
CTTN-215ENST00000533931 AKNAQ7Z591 1439 aa24.12■■□□□ 1.45
CTTN-215ENST00000533931 PLEKHH2Q8IVE3 1493 aa24.12■■□□□ 1.45
CTTN-215ENST00000533931 KIAA1107Q9UPP5 1409 aa24.09■■□□□ 1.45
CTTN-215ENST00000533931 ADGRL1O94910 1474 aa24.07■■□□□ 1.44
CTTN-215ENST00000533931 ABCC1P33527 1531 aa24.07■■□□□ 1.44
CTTN-215ENST00000533931 FGD6Q6ZV73 1430 aa24.07■■□□□ 1.44
CTTN-215ENST00000533931 SAMD9LQ8IVG5 1584 aa24.06■■□□□ 1.44
CTTN-215ENST00000533931 KDM6BO15054 1643 aa24.03■■□□□ 1.44
CTTN-215ENST00000533931 DENND4BO75064 1496 aaPredicted RBP24.03■■□□□ 1.44
CTTN-215ENST00000533931 CAMSAP2Q08AD1 1489 aa24.02■■□□□ 1.44
CTTN-215ENST00000533931 TCOF1Q13428 1488 aaKnown RBP24.02■■□□□ 1.44
CTTN-215ENST00000533931 SCAPERQ9BY12 1400 aa24.01■■□□□ 1.43
CTTN-215ENST00000533931 POGZQ7Z3K3 1410 aa24■■□□□ 1.43
CTTN-215ENST00000533931 ZNF518AQ6AHZ1 1483 aa23.99■■□□□ 1.43
CTTN-215ENST00000533931 COL17A1Q9UMD9 1497 aaPredicted RBP23.99■■□□□ 1.43
CTTN-215ENST00000533931 PTPN23Q9H3S7 1636 aa23.99■■□□□ 1.43
CTTN-215ENST00000533931 RSPH4AQ5TD94 716 aa23.98■■□□□ 1.43
CTTN-215ENST00000533931 ZNF777Q9ULD5 760 aaPredicted RBP23.98■■□□□ 1.43
CTTN-215ENST00000533931 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.98■■□□□ 1.43
CTTN-215ENST00000533931 PPARGC1BQ86YN6 1023 aaKnown RBP23.97■■□□□ 1.43
CTTN-215ENST00000533931 SYCP2Q9BX26 1530 aa23.97■■□□□ 1.43
CTTN-215ENST00000533931 MBD5Q9P267 1494 aa23.97■■□□□ 1.43
CTTN-215ENST00000533931 ARHGEF5Q12774 1597 aa23.96■■□□□ 1.43
CTTN-215ENST00000533931 ARHGEF12Q9NZN5 1544 aa23.96■■□□□ 1.43
CTTN-215ENST00000533931 ZMYM4Q5VZL5 1548 aa23.95■■□□□ 1.43
CTTN-215ENST00000533931 RRBP1Q9P2E9 1410 aaKnown RBP23.95■■□□□ 1.42
CTTN-215ENST00000533931 ZNF644Q9H582 1327 aaPredicted RBP23.94■■□□□ 1.42
CTTN-215ENST00000533931 RICTORQ6R327 1708 aa23.94■■□□□ 1.42
CTTN-215ENST00000533931 KDM5CP41229 1560 aa23.94■■□□□ 1.42
CTTN-215ENST00000533931 FRMPD1Q5SYB0 1578 aa23.94■■□□□ 1.42
CTTN-215ENST00000533931 CCDC141Q6ZP82 1450 aa23.92■■□□□ 1.42
CTTN-215ENST00000533931 MAGI2Q86UL8 1455 aa23.92■■□□□ 1.42
CTTN-215ENST00000533931 TRAPPC8Q9Y2L5 1435 aa23.91■■□□□ 1.42
CTTN-215ENST00000533931 MLH3Q9UHC1 1453 aa23.88■■□□□ 1.41
CTTN-215ENST00000533931 RAPGEF3O95398 923 aa23.88■■□□□ 1.41
CTTN-215ENST00000533931 HNRNPMP52272 730 aaKnown RBP eCLIP23.88■■□□□ 1.41
CTTN-215ENST00000533931 SHANK2Q9UPX8 1470 aa23.86■■□□□ 1.41
CTTN-215ENST00000533931 DNMT1P26358 1616 aaKnown RBP23.85■■□□□ 1.41
CTTN-215ENST00000533931 RTEL1-TNFRSF6BF6WH68 1400 aa23.84■■□□□ 1.41
CTTN-215ENST00000533931 HECW2Q9P2P5 1572 aa23.84■■□□□ 1.41
CTTN-215ENST00000533931 AFAP1Q8N556 730 aa23.84■■□□□ 1.41
CTTN-215ENST00000533931 MAST1Q9Y2H9 1570 aa23.83■■□□□ 1.41
CTTN-215ENST00000533931 ABCC5O15440 1437 aa23.82■■□□□ 1.4
CTTN-215ENST00000533931 DAPK1P53355 1430 aa23.82■■□□□ 1.4
CTTN-215ENST00000533931 INO80Q9ULG1 1556 aaPredicted RBP23.82■■□□□ 1.4
CTTN-215ENST00000533931 FAM50AQ14320 339 aaKnown RBP23.81■■□□□ 1.4
CTTN-215ENST00000533931 SPAG9O60271 1321 aaKnown RBP23.81■■□□□ 1.4
CTTN-215ENST00000533931 ZFYVE16Q7Z3T8 1539 aa23.8■■□□□ 1.4
CTTN-215ENST00000533931 TSPY4P0CV99 314 aa23.8■■□□□ 1.4
CTTN-215ENST00000533931 TSPY10P0CW01 314 aa23.8■■□□□ 1.4
CTTN-215ENST00000533931 ARHGEF40Q8TER5 1519 aa23.79■■□□□ 1.4
CTTN-215ENST00000533931 CROCC2H7BZ55 1655 aa23.79■■□□□ 1.4
CTTN-215ENST00000533931 ATP7AQ04656 1500 aa23.79■■□□□ 1.4
CTTN-215ENST00000533931 C9orf84Q5VXU9 1444 aa23.77■■□□□ 1.4
CTTN-215ENST00000533931 KIDINS220Q9ULH0 1771 aa23.75■■□□□ 1.39
CTTN-215ENST00000533931 REREQ9P2R6 1566 aa23.74■■□□□ 1.39
CTTN-215ENST00000533931 ADGRL2O95490 1459 aa23.73■■□□□ 1.39
CTTN-215ENST00000533931 PLXNC1O60486 1568 aa23.73■■□□□ 1.39
CTTN-215ENST00000533931 YEATS2Q9ULM3 1422 aa23.72■■□□□ 1.39
CTTN-215ENST00000533931 DIP2CQ9Y2E4 1556 aa23.72■■□□□ 1.39
CTTN-215ENST00000533931 ATP10AO60312 1499 aa23.71■■□□□ 1.39
CTTN-215ENST00000533931 ABCA6Q8N139 1617 aa23.7■■□□□ 1.39
CTTN-215ENST00000533931 ROCK1Q13464 1354 aa23.7■■□□□ 1.38
CTTN-215ENST00000533931 ANKRD30AQ9BXX3 1397 aa23.68■■□□□ 1.38
CTTN-215ENST00000533931 PTPRKQ15262 1439 aa23.67■■□□□ 1.38
CTTN-215ENST00000533931 ADGBQ8N7X0 1667 aa23.67■■□□□ 1.38
CTTN-215ENST00000533931 MYT1LQ9UL68 1186 aa23.66■■□□□ 1.38
CTTN-215ENST00000533931 NCOA1Q15788 1441 aa23.66■■□□□ 1.38
CTTN-215ENST00000533931 A2MP01023 1474 aa23.64■■□□□ 1.38
CTTN-215ENST00000533931 AGLP35573 1532 aa23.64■■□□□ 1.37
CTTN-215ENST00000533931 DUOX2Q9NRD8 1548 aa23.62■■□□□ 1.37
CTTN-215ENST00000533931 DHX29Q7Z478 1369 aaKnown RBP23.62■■□□□ 1.37
CTTN-215ENST00000533931 KIF15Q9NS87 1388 aa23.62■■□□□ 1.37
CTTN-215ENST00000533931 ERBINQ96RT1 1412 aa23.59■■□□□ 1.37
CTTN-215ENST00000533931 BCORL1Q5H9F3 1711 aa23.56■■□□□ 1.36
CTTN-215ENST00000533931 ITGAEP38570 1179 aa23.56■■□□□ 1.36
CTTN-215ENST00000533931 CHIC2Q9UKJ5 165 aa23.56■■□□□ 1.36
CTTN-215ENST00000533931 EIF2AK4Q9P2K8 1649 aaKnown RBP23.55■■□□□ 1.36
CTTN-215ENST00000533931 HFM1A2PYH4 1435 aa23.54■■□□□ 1.36
CTTN-215ENST00000533931 RRP7BPQ9NSQ0 103 aa23.53■■□□□ 1.36
CTTN-215ENST00000533931 TRIM26Q12899 539 aaPredicted RBP23.51■■□□□ 1.35
CTTN-215ENST00000533931 ANKRD50Q9ULJ7 1429 aa23.5■■□□□ 1.35
CTTN-215ENST00000533931 SIGLEC1Q9BZZ2 1709 aa23.49■■□□□ 1.35
CTTN-215ENST00000533931 NAIPQ13075 1403 aa23.49■■□□□ 1.35
CTTN-215ENST00000533931 FAM135AQ9P2D6 1515 aa23.49■■□□□ 1.35
CTTN-215ENST00000533931 GCC2Q8IWJ2 1684 aa23.48■■□□□ 1.35
CTTN-215ENST00000533931 RNF17Q9BXT8 1623 aaKnown RBP23.46■■□□□ 1.35
CTTN-215ENST00000533931 PPP6R1Q9UPN7 881 aa23.46■■□□□ 1.35
CTTN-215ENST00000533931 ARID4BQ4LE39 1312 aaPredicted RBP23.45■■□□□ 1.34
CTTN-215ENST00000533931 ACIN1Q9UKV3 1341 aaKnown RBP23.44■■□□□ 1.34
CTTN-215ENST00000533931 DEPDC5O75140 1603 aa23.42■■□□□ 1.34
CTTN-215ENST00000533931 KIF3BO15066 747 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms