RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CABP2Q9NPB3 220 aa9.97□□□□□ -0.81
BRCA2-205ENST00000533776 ARSIQ5FYB1 569 aa9.96□□□□□ -0.82
BRCA2-205ENST00000533776 IRX2Q9BZI1 471 aaPredicted RBP9.95□□□□□ -0.82
BRCA2-205ENST00000533776 RGS20O76081 388 aa9.94□□□□□ -0.82
BRCA2-205ENST00000533776 PBX2P40425 430 aa9.92□□□□□ -0.82
BRCA2-205ENST00000533776 RNF25Q96BH1 459 aaPredicted RBP9.92□□□□□ -0.82
BRCA2-205ENST00000533776 RIOK3O14730 519 aaKnown RBP9.91□□□□□ -0.82
BRCA2-205ENST00000533776 POTEEQ6S8J3 1075 aa9.91□□□□□ -0.82
BRCA2-205ENST00000533776 KHSRPQ92945 711 aaKnown RBP eCLIP9.88□□□□□ -0.83
BRCA2-205ENST00000533776 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.86□□□□□ -0.83
BRCA2-205ENST00000533776 VGFO15240 615 aaPredicted RBP9.86□□□□□ -0.83
BRCA2-205ENST00000533776 MICALL2Q8IY33 904 aa9.86□□□□□ -0.83
BRCA2-205ENST00000533776 ZFP91Q96JP5 570 aaPredicted RBP9.86□□□□□ -0.83
BRCA2-205ENST00000533776 EFCAB3Q8N7B9 438 aa9.85□□□□□ -0.83
BRCA2-205ENST00000533776 AXIN2Q9Y2T1 843 aa9.85□□□□□ -0.83
BRCA2-205ENST00000533776 ECM2O94769 699 aaPredicted RBP9.84□□□□□ -0.83
BRCA2-205ENST00000533776 ADGRD1Q6QNK2 874 aa9.81□□□□□ -0.84
BRCA2-205ENST00000533776 PKD2Q13563 968 aa9.79□□□□□ -0.84
BRCA2-205ENST00000533776 IFFO2Q5TF58 517 aa9.79□□□□□ -0.84
BRCA2-205ENST00000533776 BCL11BQ9C0K0 894 aaPredicted RBP9.77□□□□□ -0.85
BRCA2-205ENST00000533776 TAOK2Q9UL54 1235 aa9.77□□□□□ -0.85
BRCA2-205ENST00000533776 RGL2O15211 777 aa9.75□□□□□ -0.85
BRCA2-205ENST00000533776 HRO43593 1189 aa9.75□□□□□ -0.85
BRCA2-205ENST00000533776 STK24Q9Y6E0 443 aa9.75□□□□□ -0.85
BRCA2-205ENST00000533776 SOX12O15370 315 aa9.74□□□□□ -0.85
BRCA2-205ENST00000533776 PHF8Q9UPP1 1060 aa9.74□□□□□ -0.85
BRCA2-205ENST00000533776 STK25O00506 426 aa9.72□□□□□ -0.85
BRCA2-205ENST00000533776 LHX6Q9UPM6 363 aa9.72□□□□□ -0.85
BRCA2-205ENST00000533776 ARHGAP33O14559 1287 aa9.71□□□□□ -0.86
BRCA2-205ENST00000533776 NUDT7P0C024 238 aa9.71□□□□□ -0.86
BRCA2-205ENST00000533776 MS4A4AQ96JQ5 239 aa9.71□□□□□ -0.86
BRCA2-205ENST00000533776 A0A0G2JS52 829 aa9.7□□□□□ -0.86
BRCA2-205ENST00000533776 TK2O00142 265 aa9.7□□□□□ -0.86
BRCA2-205ENST00000533776 KCTD12Q96CX2 325 aaKnown RBP9.7□□□□□ -0.86
BRCA2-205ENST00000533776 NLRP6P59044 892 aa9.66□□□□□ -0.86
BRCA2-205ENST00000533776 Q6ZNB5 142 aa9.66□□□□□ -0.86
BRCA2-205ENST00000533776 FBXO22Q8NEZ5 403 aa9.64□□□□□ -0.87
BRCA2-205ENST00000533776 MFRPQ9BY79 579 aa9.64□□□□□ -0.87
BRCA2-205ENST00000533776 DMRTA1Q5VZB9 504 aa9.62□□□□□ -0.87
BRCA2-205ENST00000533776 PTPN5P54829 565 aa9.59□□□□□ -0.87
BRCA2-205ENST00000533776 PCDHGA4Q9Y5G9 962 aa9.59□□□□□ -0.87
BRCA2-205ENST00000533776 SLC34A2O95436 690 aa9.58□□□□□ -0.88
BRCA2-205ENST00000533776 LCE2BO14633 110 aa9.56□□□□□ -0.88
BRCA2-205ENST00000533776 KIF3CO14782 793 aa9.56□□□□□ -0.88
BRCA2-205ENST00000533776 PSEN2P49810 448 aa9.56□□□□□ -0.88
BRCA2-205ENST00000533776 PSDA5PKW4 1024 aaPredicted RBP9.55□□□□□ -0.88
BRCA2-205ENST00000533776 HS6ST3Q8IZP7 471 aa9.53□□□□□ -0.88
BRCA2-205ENST00000533776 STAC3Q96MF2 364 aa9.53□□□□□ -0.88
BRCA2-205ENST00000533776 CHGAP10645 457 aaKnown RBP9.51□□□□□ -0.89
BRCA2-205ENST00000533776 KDM4FA0A1W2PPD8 638 aa9.5□□□□□ -0.89
BRCA2-205ENST00000533776 C2orf72A6NCS6 295 aa9.49□□□□□ -0.89
BRCA2-205ENST00000533776 PPP1R37O75864 691 aa9.49□□□□□ -0.89
BRCA2-205ENST00000533776 THSD4Q6ZMP0 1018 aa9.47□□□□□ -0.89
BRCA2-205ENST00000533776 TRAF7Q6Q0C0 670 aa9.46□□□□□ -0.9
BRCA2-205ENST00000533776 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
BRCA2-205ENST00000533776 VPS9D1Q9Y2B5 631 aa9.43□□□□□ -0.9
BRCA2-205ENST00000533776 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
BRCA2-205ENST00000533776 NKX1-1Q15270 411 aaPredicted RBP9.41□□□□□ -0.9
BRCA2-205ENST00000533776 TMC2Q8TDI7 906 aa9.41□□□□□ -0.9
BRCA2-205ENST00000533776 DNAJC5Q9H3Z4 198 aa9.38□□□□□ -0.91
BRCA2-205ENST00000533776 ITGBL1O95965 494 aaPredicted RBP9.37□□□□□ -0.91
BRCA2-205ENST00000533776 PPP4R3BQ5MIZ7 849 aa9.37□□□□□ -0.91
BRCA2-205ENST00000533776 BHMG1C9JSJ3 638 aaPredicted RBP9.36□□□□□ -0.91
BRCA2-205ENST00000533776 KCNK17Q96T54 332 aa9.35□□□□□ -0.91
BRCA2-205ENST00000533776 SLC4A5Q9BY07 1137 aa9.34□□□□□ -0.91
BRCA2-205ENST00000533776 RYDENQ9NUL5 291 aaKnown RBP9.33□□□□□ -0.92
BRCA2-205ENST00000533776 GFRA3O60609 400 aa9.32□□□□□ -0.92
BRCA2-205ENST00000533776 PTCD2Q8WV60 388 aaKnown RBP9.32□□□□□ -0.92
BRCA2-205ENST00000533776 WNT2BQ93097 391 aa9.32□□□□□ -0.92
BRCA2-205ENST00000533776 ZNF775Q96BV0 537 aaPredicted RBP9.32□□□□□ -0.92
BRCA2-205ENST00000533776 KCNH8Q96L42 1107 aa9.3□□□□□ -0.92
BRCA2-205ENST00000533776 PLPP6Q8IY26 295 aa9.29□□□□□ -0.92
BRCA2-205ENST00000533776 GPHNQ9NQX3 736 aaPredicted RBP9.29□□□□□ -0.92
BRCA2-205ENST00000533776 FOXK1P85037 733 aa9.28□□□□□ -0.92
BRCA2-205ENST00000533776 DSG2Q14126 1118 aa9.28□□□□□ -0.92
BRCA2-205ENST00000533776 ZNF787Q6DD87 383 aa9.28□□□□□ -0.92
BRCA2-205ENST00000533776 GOLGA8CPA6NN73 597 aa9.27□□□□□ -0.93
BRCA2-205ENST00000533776 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.93
BRCA2-205ENST00000533776 MRPL50Q8N5N7 158 aaKnown RBP9.24□□□□□ -0.93
BRCA2-205ENST00000533776 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
BRCA2-205ENST00000533776 NRG2O14511 850 aaPredicted RBP9.21□□□□□ -0.94
BRCA2-205ENST00000533776 ZBED2Q9BTP6 218 aa9.2□□□□□ -0.94
BRCA2-205ENST00000533776 NCKAP5LQ9HCH0 1330 aa9.2□□□□□ -0.94
BRCA2-205ENST00000533776 PPP1R15BQ5SWA1 713 aa9.19□□□□□ -0.94
BRCA2-205ENST00000533776 UPF1Q92900 1129 aaKnown RBP eCLIP9.19□□□□□ -0.94
BRCA2-205ENST00000533776 BCL2L12Q9HB09 334 aa9.19□□□□□ -0.94
BRCA2-205ENST00000533776 TBC1D12O60347 775 aa9.17□□□□□ -0.94
BRCA2-205ENST00000533776 PDE4AP27815 886 aa9.17□□□□□ -0.94
BRCA2-205ENST00000533776 KCNC4Q03721 635 aa9.17□□□□□ -0.94
BRCA2-205ENST00000533776 AMER1Q5JTC6 1135 aaPredicted RBP9.16□□□□□ -0.94
BRCA2-205ENST00000533776 LARP6Q9BRS8 491 aaKnown RBP9.15□□□□□ -0.94
BRCA2-205ENST00000533776 OXER1Q8TDS5 423 aa9.14□□□□□ -0.95
BRCA2-205ENST00000533776 NBPF3Q9H094 633 aa9.14□□□□□ -0.95
BRCA2-205ENST00000533776 RTN4Q9NQC3 1192 aaKnown RBP9.14□□□□□ -0.95
BRCA2-205ENST00000533776 LOC100996750A0A140TA64 210 aa9.13□□□□□ -0.95
BRCA2-205ENST00000533776 DDX27Q96GQ7 796 aaKnown RBP9.13□□□□□ -0.95
BRCA2-205ENST00000533776 KRTAP4-6Q9BYQ5 205 aa9.13□□□□□ -0.95
BRCA2-205ENST00000533776 CADPS2Q86UW7 1296 aa9.12□□□□□ -0.95
BRCA2-205ENST00000533776 NYAP1Q6ZVC0 841 aa9.11□□□□□ -0.95
BRCA2-205ENST00000533776 PTPREP23469 700 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms