RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 PREX2Q70Z35 1606 aa22.78■■□□□ 1.24
SF3B2-214ENST00000533595 NCOA2Q15596 1464 aa22.78■■□□□ 1.24
SF3B2-214ENST00000533595 GPATCH8Q9UKJ3 1502 aaKnown RBP22.77■■□□□ 1.24
SF3B2-214ENST00000533595 CDC42BPAQ5VT25 1732 aa22.77■■□□□ 1.23
SF3B2-214ENST00000533595 AKNAQ7Z591 1439 aa22.76■■□□□ 1.23
SF3B2-214ENST00000533595 AEBP2Q6ZN18 517 aaPredicted RBP22.76■■□□□ 1.23
SF3B2-214ENST00000533595 CDC42BPBQ9Y5S2 1711 aa22.76■■□□□ 1.23
SF3B2-214ENST00000533595 COL17A1Q9UMD9 1497 aaPredicted RBP22.75■■□□□ 1.23
SF3B2-214ENST00000533595 CFDP1Q9UEE9 299 aaPredicted RBP22.71■■□□□ 1.23
SF3B2-214ENST00000533595 ADGRL1O94910 1474 aa22.7■■□□□ 1.22
SF3B2-214ENST00000533595 ITSN2Q9NZM3 1697 aa22.7■■□□□ 1.22
SF3B2-214ENST00000533595 ZNF777Q9ULD5 760 aaPredicted RBP22.67■■□□□ 1.22
SF3B2-214ENST00000533595 DENND4BO75064 1496 aaPredicted RBP22.66■■□□□ 1.22
SF3B2-214ENST00000533595 SCAPERQ9BY12 1400 aa22.66■■□□□ 1.22
SF3B2-214ENST00000533595 RAPGEF3O95398 923 aa22.65■■□□□ 1.22
SF3B2-214ENST00000533595 SAMD9LQ8IVG5 1584 aa22.63■■□□□ 1.21
SF3B2-214ENST00000533595 MYOM3Q5VTT5 1437 aa22.62■■□□□ 1.21
SF3B2-214ENST00000533595 ABCC1P33527 1531 aa22.62■■□□□ 1.21
SF3B2-214ENST00000533595 PLEKHH2Q8IVE3 1493 aa22.6■■□□□ 1.21
SF3B2-214ENST00000533595 RICTORQ6R327 1708 aa22.6■■□□□ 1.21
SF3B2-214ENST00000533595 FRMPD1Q5SYB0 1578 aa22.6■■□□□ 1.21
SF3B2-214ENST00000533595 POGZQ7Z3K3 1410 aa22.6■■□□□ 1.21
SF3B2-214ENST00000533595 PPARGC1BQ86YN6 1023 aaKnown RBP22.59■■□□□ 1.21
SF3B2-214ENST00000533595 ZNF644Q9H582 1327 aaPredicted RBP22.58■■□□□ 1.21
SF3B2-214ENST00000533595 ARHGEF12Q9NZN5 1544 aa22.58■■□□□ 1.21
SF3B2-214ENST00000533595 MIA2Q96PC5 1412 aa22.57■■□□□ 1.2
SF3B2-214ENST00000533595 KIAA1107Q9UPP5 1409 aa22.57■■□□□ 1.2
SF3B2-214ENST00000533595 ZNF518AQ6AHZ1 1483 aa22.57■■□□□ 1.2
SF3B2-214ENST00000533595 SYCP2Q9BX26 1530 aa22.57■■□□□ 1.2
SF3B2-214ENST00000533595 HNRNPMP52272 730 aaKnown RBP eCLIP22.55■■□□□ 1.2
SF3B2-214ENST00000533595 TRAPPC8Q9Y2L5 1435 aa22.55■■□□□ 1.2
SF3B2-214ENST00000533595 CAMSAP2Q08AD1 1489 aa22.54■■□□□ 1.2
SF3B2-214ENST00000533595 AFAP1Q8N556 730 aa22.54■■□□□ 1.2
SF3B2-214ENST00000533595 ZMYM4Q5VZL5 1548 aa22.53■■□□□ 1.2
SF3B2-214ENST00000533595 KDM5CP41229 1560 aa22.51■■□□□ 1.19
SF3B2-214ENST00000533595 FGD6Q6ZV73 1430 aa22.51■■□□□ 1.19
SF3B2-214ENST00000533595 MAGI2Q86UL8 1455 aa22.49■■□□□ 1.19
SF3B2-214ENST00000533595 MBD5Q9P267 1494 aa22.49■■□□□ 1.19
SF3B2-214ENST00000533595 PTPN23Q9H3S7 1636 aa22.47■■□□□ 1.19
SF3B2-214ENST00000533595 RSPH4AQ5TD94 716 aa22.46■■□□□ 1.19
SF3B2-214ENST00000533595 MYT1LQ9UL68 1186 aa22.46■■□□□ 1.19
SF3B2-214ENST00000533595 ZFYVE16Q7Z3T8 1539 aa22.46■■□□□ 1.19
SF3B2-214ENST00000533595 MLH3Q9UHC1 1453 aa22.45■■□□□ 1.18
SF3B2-214ENST00000533595 HECW2Q9P2P5 1572 aa22.45■■□□□ 1.18
SF3B2-214ENST00000533595 SPAG9O60271 1321 aaKnown RBP22.44■■□□□ 1.18
SF3B2-214ENST00000533595 TCOF1Q13428 1488 aaKnown RBP22.44■■□□□ 1.18
SF3B2-214ENST00000533595 CCDC141Q6ZP82 1450 aa22.44■■□□□ 1.18
SF3B2-214ENST00000533595 ARHGEF40Q8TER5 1519 aa22.44■■□□□ 1.18
SF3B2-214ENST00000533595 YEATS2Q9ULM3 1422 aa22.44■■□□□ 1.18
SF3B2-214ENST00000533595 ARHGEF5Q12774 1597 aa22.43■■□□□ 1.18
SF3B2-214ENST00000533595 FAM50AQ14320 339 aaKnown RBP22.39■■□□□ 1.17
SF3B2-214ENST00000533595 KIDINS220Q9ULH0 1771 aa22.39■■□□□ 1.17
SF3B2-214ENST00000533595 TSPY4P0CV99 314 aa22.38■■□□□ 1.17
SF3B2-214ENST00000533595 TSPY10P0CW01 314 aa22.38■■□□□ 1.17
SF3B2-214ENST00000533595 ATP7AQ04656 1500 aa22.37■■□□□ 1.17
SF3B2-214ENST00000533595 ATP10AO60312 1499 aa22.37■■□□□ 1.17
SF3B2-214ENST00000533595 INO80Q9ULG1 1556 aaPredicted RBP22.37■■□□□ 1.17
SF3B2-214ENST00000533595 RTEL1-TNFRSF6BF6WH68 1400 aa22.36■■□□□ 1.17
SF3B2-214ENST00000533595 ABCA6Q8N139 1617 aa22.35■■□□□ 1.17
SF3B2-214ENST00000533595 DIP2CQ9Y2E4 1556 aa22.35■■□□□ 1.17
SF3B2-214ENST00000533595 DNMT1P26358 1616 aaKnown RBP22.34■■□□□ 1.17
SF3B2-214ENST00000533595 C9orf84Q5VXU9 1444 aa22.33■■□□□ 1.17
SF3B2-214ENST00000533595 ABCC5O15440 1437 aa22.32■■□□□ 1.16
SF3B2-214ENST00000533595 DAPK1P53355 1430 aa22.32■■□□□ 1.16
SF3B2-214ENST00000533595 ARID4BQ4LE39 1312 aaPredicted RBP22.31■■□□□ 1.16
SF3B2-214ENST00000533595 RRBP1Q9P2E9 1410 aaKnown RBP22.31■■□□□ 1.16
SF3B2-214ENST00000533595 MAST1Q9Y2H9 1570 aa22.3■■□□□ 1.16
SF3B2-214ENST00000533595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.3■■□□□ 1.16
SF3B2-214ENST00000533595 SHANK2Q9UPX8 1470 aa22.29■■□□□ 1.16
SF3B2-214ENST00000533595 CROCC2H7BZ55 1655 aa22.29■■□□□ 1.16
SF3B2-214ENST00000533595 REREQ9P2R6 1566 aa22.29■■□□□ 1.16
SF3B2-214ENST00000533595 ADGBQ8N7X0 1667 aa22.26■■□□□ 1.15
SF3B2-214ENST00000533595 SIGLEC1Q9BZZ2 1709 aa22.26■■□□□ 1.15
SF3B2-214ENST00000533595 A2MP01023 1474 aa22.25■■□□□ 1.15
SF3B2-214ENST00000533595 CHIC2Q9UKJ5 165 aa22.24■■□□□ 1.15
SF3B2-214ENST00000533595 AGLP35573 1532 aa22.22■■□□□ 1.15
SF3B2-214ENST00000533595 PLXNC1O60486 1568 aa22.22■■□□□ 1.15
SF3B2-214ENST00000533595 DHX29Q7Z478 1369 aaKnown RBP22.22■■□□□ 1.15
SF3B2-214ENST00000533595 ITGAEP38570 1179 aa22.2■■□□□ 1.14
SF3B2-214ENST00000533595 ANKRD30AQ9BXX3 1397 aa22.2■■□□□ 1.14
SF3B2-214ENST00000533595 BCORL1Q5H9F3 1711 aa22.2■■□□□ 1.14
SF3B2-214ENST00000533595 KDM4FA0A1W2PPD8 638 aa22.19■■□□□ 1.14
SF3B2-214ENST00000533595 PTPRKQ15262 1439 aa22.19■■□□□ 1.14
SF3B2-214ENST00000533595 KIF15Q9NS87 1388 aa22.18■■□□□ 1.14
SF3B2-214ENST00000533595 MLECQ14165 292 aa22.18■■□□□ 1.14
SF3B2-214ENST00000533595 RRP7BPQ9NSQ0 103 aa22.18■■□□□ 1.14
SF3B2-214ENST00000533595 ADGRL2O95490 1459 aa22.17■■□□□ 1.14
SF3B2-214ENST00000533595 NCOA1Q15788 1441 aa22.16■■□□□ 1.14
SF3B2-214ENST00000533595 DUOX2Q9NRD8 1548 aa22.15■■□□□ 1.14
SF3B2-214ENST00000533595 ADAMTSL3P82987 1691 aa22.14■■□□□ 1.14
SF3B2-214ENST00000533595 ROCK1Q13464 1354 aa22.12■■□□□ 1.13
SF3B2-214ENST00000533595 KIF3BO15066 747 aa22.12■■□□□ 1.13
SF3B2-214ENST00000533595 MADDQ8WXG6 1647 aa22.09■■□□□ 1.13
SF3B2-214ENST00000533595 ERBINQ96RT1 1412 aa22.09■■□□□ 1.13
SF3B2-214ENST00000533595 GGT6Q6P531 493 aa22.09■■□□□ 1.13
SF3B2-214ENST00000533595 EIF2AK4Q9P2K8 1649 aaKnown RBP22.08■■□□□ 1.13
SF3B2-214ENST00000533595 FER1L4A9Z1Z3 1794 aa22.07■■□□□ 1.12
SF3B2-214ENST00000533595 ESF1Q9H501 851 aaKnown RBP22.05■■□□□ 1.12
SF3B2-214ENST00000533595 PPP6R1Q9UPN7 881 aa22.05■■□□□ 1.12
SF3B2-214ENST00000533595 ANKRD50Q9ULJ7 1429 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms