RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 RAPGEF3O95398 923 aa15.02■□□□□ -0
ZNF250-209ENST00000533543 TROQ12816 1431 aaPredicted RBP15.01□□□□□ -0.01
ZNF250-209ENST00000533543 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
ZNF250-209ENST00000533543 FANCAO15360 1455 aa15□□□□□ -0.01
ZNF250-209ENST00000533543 AKNAQ7Z591 1439 aa15□□□□□ -0.01
ZNF250-209ENST00000533543 CCDC18Q5T9S5 1454 aa14.99□□□□□ -0.01
ZNF250-209ENST00000533543 FYCO1Q9BQS8 1478 aa14.99□□□□□ -0.01
ZNF250-209ENST00000533543 CEP162Q5TB80 1403 aa14.99□□□□□ -0.01
ZNF250-209ENST00000533543 KIF14Q15058 1648 aa14.99□□□□□ -0.01
ZNF250-209ENST00000533543 ADGRL1O94910 1474 aa14.98□□□□□ -0.01
ZNF250-209ENST00000533543 LOC105371045A0A1W2PR82 267 aa14.98□□□□□ -0.01
ZNF250-209ENST00000533543 PLCH2O75038 1416 aa14.98□□□□□ -0.01
ZNF250-209ENST00000533543 FRMPD1Q5SYB0 1578 aa14.96□□□□□ -0.01
ZNF250-209ENST00000533543 DENND4BO75064 1496 aaPredicted RBP14.95□□□□□ -0.02
ZNF250-209ENST00000533543 CFAP74Q9C0B2 1584 aa14.94□□□□□ -0.02
ZNF250-209ENST00000533543 EFCAB2Q5VUJ9 269 aa14.93□□□□□ -0.02
ZNF250-209ENST00000533543 SCAPERQ9BY12 1400 aa14.92□□□□□ -0.02
ZNF250-209ENST00000533543 MYO5CQ9NQX4 1742 aa14.91□□□□□ -0.02
ZNF250-209ENST00000533543 ARHGAP5Q13017 1502 aa14.9□□□□□ -0.02
ZNF250-209ENST00000533543 RICTORQ6R327 1708 aa14.89□□□□□ -0.03
ZNF250-209ENST00000533543 POGZQ7Z3K3 1410 aa14.89□□□□□ -0.03
ZNF250-209ENST00000533543 ARHGEF40Q8TER5 1519 aa14.87□□□□□ -0.03
ZNF250-209ENST00000533543 ZMYM4Q5VZL5 1548 aa14.86□□□□□ -0.03
ZNF250-209ENST00000533543 YEATS2Q9ULM3 1422 aa14.85□□□□□ -0.03
ZNF250-209ENST00000533543 ARID4BQ4LE39 1312 aaPredicted RBP14.85□□□□□ -0.03
ZNF250-209ENST00000533543 MTUS2Q5JR59 1369 aa14.85□□□□□ -0.03
ZNF250-209ENST00000533543 ZFYVE16Q7Z3T8 1539 aa14.84□□□□□ -0.03
ZNF250-209ENST00000533543 PREX2Q70Z35 1606 aa14.84□□□□□ -0.03
ZNF250-209ENST00000533543 CDC42BPBQ9Y5S2 1711 aa14.83□□□□□ -0.03
ZNF250-209ENST00000533543 AFAP1Q8N556 730 aa14.83□□□□□ -0.04
ZNF250-209ENST00000533543 MAGI2Q86UL8 1455 aa14.82□□□□□ -0.04
ZNF250-209ENST00000533543 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
ZNF250-209ENST00000533543 GPATCH8Q9UKJ3 1502 aaKnown RBP14.82□□□□□ -0.04
ZNF250-209ENST00000533543 ZNF777Q9ULD5 760 aaPredicted RBP14.81□□□□□ -0.04
ZNF250-209ENST00000533543 VPS8Q8N3P4 1428 aa14.81□□□□□ -0.04
ZNF250-209ENST00000533543 ZNF518AQ6AHZ1 1483 aa14.81□□□□□ -0.04
ZNF250-209ENST00000533543 ABCC1P33527 1531 aa14.8□□□□□ -0.04
ZNF250-209ENST00000533543 ARHGEF12Q9NZN5 1544 aa14.8□□□□□ -0.04
ZNF250-209ENST00000533543 CDC42BPAQ5VT25 1732 aa14.8□□□□□ -0.04
ZNF250-209ENST00000533543 EHBP1L1Q8N3D4 1523 aa14.79□□□□□ -0.04
ZNF250-209ENST00000533543 CCNB3Q8WWL7 1395 aa14.79□□□□□ -0.04
ZNF250-209ENST00000533543 TRAPPC8Q9Y2L5 1435 aa14.79□□□□□ -0.04
ZNF250-209ENST00000533543 MYT1LQ9UL68 1186 aa14.78□□□□□ -0.04
ZNF250-209ENST00000533543 ADAMTSL3P82987 1691 aa14.77□□□□□ -0.04
ZNF250-209ENST00000533543 KDM5CP41229 1560 aa14.77□□□□□ -0.04
ZNF250-209ENST00000533543 CFDP1Q9UEE9 299 aaPredicted RBP14.77□□□□□ -0.05
ZNF250-209ENST00000533543 BCORL1Q5H9F3 1711 aa14.77□□□□□ -0.05
ZNF250-209ENST00000533543 ATP10AO60312 1499 aa14.76□□□□□ -0.05
ZNF250-209ENST00000533543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
ZNF250-209ENST00000533543 C9orf84Q5VXU9 1444 aa14.75□□□□□ -0.05
ZNF250-209ENST00000533543 SIGLEC1Q9BZZ2 1709 aa14.75□□□□□ -0.05
ZNF250-209ENST00000533543 ITSN2Q9NZM3 1697 aa14.75□□□□□ -0.05
ZNF250-209ENST00000533543 MLECQ14165 292 aa14.75□□□□□ -0.05
ZNF250-209ENST00000533543 TIAM1Q13009 1591 aa14.75□□□□□ -0.05
ZNF250-209ENST00000533543 SAMD9LQ8IVG5 1584 aa14.75□□□□□ -0.05
ZNF250-209ENST00000533543 MADDQ8WXG6 1647 aa14.74□□□□□ -0.05
ZNF250-209ENST00000533543 HECW2Q9P2P5 1572 aa14.74□□□□□ -0.05
ZNF250-209ENST00000533543 HNRNPMP52272 730 aaKnown RBP eCLIP14.74□□□□□ -0.05
ZNF250-209ENST00000533543 PTPRMP28827 1452 aa14.74□□□□□ -0.05
ZNF250-209ENST00000533543 SYCP2Q9BX26 1530 aa14.73□□□□□ -0.05
ZNF250-209ENST00000533543 MLH3Q9UHC1 1453 aa14.73□□□□□ -0.05
ZNF250-209ENST00000533543 NCOA2Q15596 1464 aa14.72□□□□□ -0.05
ZNF250-209ENST00000533543 ZNF644Q9H582 1327 aaPredicted RBP14.71□□□□□ -0.05
ZNF250-209ENST00000533543 PLEKHH2Q8IVE3 1493 aa14.71□□□□□ -0.05
ZNF250-209ENST00000533543 KIAA1107Q9UPP5 1409 aa14.71□□□□□ -0.05
ZNF250-209ENST00000533543 DIP2CQ9Y2E4 1556 aa14.71□□□□□ -0.05
ZNF250-209ENST00000533543 LRRC9Q6ZRR7 1453 aa14.7□□□□□ -0.06
ZNF250-209ENST00000533543 ABCA6Q8N139 1617 aa14.7□□□□□ -0.06
ZNF250-209ENST00000533543 SPAG9O60271 1321 aaKnown RBP14.69□□□□□ -0.06
ZNF250-209ENST00000533543 KANK4Q5T7N3 995 aaPredicted RBP14.69□□□□□ -0.06
ZNF250-209ENST00000533543 SUPT6HQ7KZ85 1726 aaKnown RBP14.69□□□□□ -0.06
ZNF250-209ENST00000533543 RIMS1Q86UR5 1692 aaKnown RBP14.68□□□□□ -0.06
ZNF250-209ENST00000533543 CACNB1Q02641 598 aaPredicted RBP14.68□□□□□ -0.06
ZNF250-209ENST00000533543 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
ZNF250-209ENST00000533543 KIDINS220Q9ULH0 1771 aa14.67□□□□□ -0.06
ZNF250-209ENST00000533543 MAP3K1Q13233 1512 aa14.66□□□□□ -0.06
ZNF250-209ENST00000533543 REREQ9P2R6 1566 aa14.66□□□□□ -0.06
ZNF250-209ENST00000533543 MBD5Q9P267 1494 aa14.64□□□□□ -0.07
ZNF250-209ENST00000533543 ATP7AQ04656 1500 aa14.63□□□□□ -0.07
ZNF250-209ENST00000533543 APLP2Q06481 763 aa14.63□□□□□ -0.07
ZNF250-209ENST00000533543 CAMSAP2Q08AD1 1489 aa14.63□□□□□ -0.07
ZNF250-209ENST00000533543 FER1L4A9Z1Z3 1794 aa14.62□□□□□ -0.07
ZNF250-209ENST00000533543 AGLP35573 1532 aa14.62□□□□□ -0.07
ZNF250-209ENST00000533543 INO80Q9ULG1 1556 aaPredicted RBP14.61□□□□□ -0.07
ZNF250-209ENST00000533543 CCDC141Q6ZP82 1450 aa14.59□□□□□ -0.07
ZNF250-209ENST00000533543 CEBPAP49715 358 aaPredicted RBP14.59□□□□□ -0.07
ZNF250-209ENST00000533543 A2MP01023 1474 aa14.58□□□□□ -0.08
ZNF250-209ENST00000533543 MYOM3Q5VTT5 1437 aa14.58□□□□□ -0.08
ZNF250-209ENST00000533543 RTEL1-TNFRSF6BF6WH68 1400 aa14.57□□□□□ -0.08
ZNF250-209ENST00000533543 LMTK3Q96Q04 1460 aa14.57□□□□□ -0.08
ZNF250-209ENST00000533543 PLXNC1O60486 1568 aa14.56□□□□□ -0.08
ZNF250-209ENST00000533543 RSPH4AQ5TD94 716 aa14.56□□□□□ -0.08
ZNF250-209ENST00000533543 ESF1Q9H501 851 aaKnown RBP14.56□□□□□ -0.08
ZNF250-209ENST00000533543 MIA2Q96PC5 1412 aa14.55□□□□□ -0.08
ZNF250-209ENST00000533543 ARHGEF5Q12774 1597 aa14.54□□□□□ -0.08
ZNF250-209ENST00000533543 TSPY4P0CV99 314 aa14.53□□□□□ -0.08
ZNF250-209ENST00000533543 TSPY10P0CW01 314 aa14.53□□□□□ -0.08
ZNF250-209ENST00000533543 HSPA2P54652 639 aa14.53□□□□□ -0.08
ZNF250-209ENST00000533543 GGT6Q6P531 493 aa14.53□□□□□ -0.08
ZNF250-209ENST00000533543 CNTLNQ9NXG0 1405 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms