RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 CCDC18Q5T9S5 1454 aa18.46■□□□□ 0.55
CLCF1-202ENST00000533438 CLIP1P30622 1438 aa18.45■□□□□ 0.54
CLCF1-202ENST00000533438 POGZQ7Z3K3 1410 aa18.44■□□□□ 0.54
CLCF1-202ENST00000533438 SCAPERQ9BY12 1400 aa18.44■□□□□ 0.54
CLCF1-202ENST00000533438 MAGI2Q86UL8 1455 aa18.44■□□□□ 0.54
CLCF1-202ENST00000533438 FYCO1Q9BQS8 1478 aa18.44■□□□□ 0.54
CLCF1-202ENST00000533438 SIGLEC1Q9BZZ2 1709 aa18.43■□□□□ 0.54
CLCF1-202ENST00000533438 CDC42BPBQ9Y5S2 1711 aa18.43■□□□□ 0.54
CLCF1-202ENST00000533438 ZFYVE16Q7Z3T8 1539 aa18.43■□□□□ 0.54
CLCF1-202ENST00000533438 MADDQ8WXG6 1647 aa18.42■□□□□ 0.54
CLCF1-202ENST00000533438 YEATS2Q9ULM3 1422 aa18.41■□□□□ 0.54
CLCF1-202ENST00000533438 EFCAB2Q5VUJ9 269 aa18.41■□□□□ 0.54
CLCF1-202ENST00000533438 LMTK3Q96Q04 1460 aa18.4■□□□□ 0.54
CLCF1-202ENST00000533438 ARHGAP5Q13017 1502 aa18.4■□□□□ 0.54
CLCF1-202ENST00000533438 PREX2Q70Z35 1606 aa18.4■□□□□ 0.54
CLCF1-202ENST00000533438 ARID4BQ4LE39 1312 aaPredicted RBP18.38■□□□□ 0.53
CLCF1-202ENST00000533438 KDM5CP41229 1560 aa18.37■□□□□ 0.53
CLCF1-202ENST00000533438 CDC42BPAQ5VT25 1732 aa18.37■□□□□ 0.53
CLCF1-202ENST00000533438 ZNF518AQ6AHZ1 1483 aa18.36■□□□□ 0.53
CLCF1-202ENST00000533438 RIMS1Q86UR5 1692 aaKnown RBP18.36■□□□□ 0.53
CLCF1-202ENST00000533438 ITSN2Q9NZM3 1697 aa18.32■□□□□ 0.52
CLCF1-202ENST00000533438 ABCC1P33527 1531 aa18.32■□□□□ 0.52
CLCF1-202ENST00000533438 ATP10AO60312 1499 aa18.32■□□□□ 0.52
CLCF1-202ENST00000533438 C9orf84Q5VXU9 1444 aa18.31■□□□□ 0.52
CLCF1-202ENST00000533438 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
CLCF1-202ENST00000533438 ARHGEF12Q9NZN5 1544 aa18.29■□□□□ 0.52
CLCF1-202ENST00000533438 AFAP1Q8N556 730 aa18.28■□□□□ 0.52
CLCF1-202ENST00000533438 DIP2CQ9Y2E4 1556 aa18.28■□□□□ 0.52
CLCF1-202ENST00000533438 CEP162Q5TB80 1403 aa18.27■□□□□ 0.52
CLCF1-202ENST00000533438 ABCA6Q8N139 1617 aa18.27■□□□□ 0.51
CLCF1-202ENST00000533438 MLH3Q9UHC1 1453 aa18.26■□□□□ 0.51
CLCF1-202ENST00000533438 REREQ9P2R6 1566 aa18.26■□□□□ 0.51
CLCF1-202ENST00000533438 TRAPPC8Q9Y2L5 1435 aa18.26■□□□□ 0.51
CLCF1-202ENST00000533438 SAMD9LQ8IVG5 1584 aa18.25■□□□□ 0.51
CLCF1-202ENST00000533438 GPATCH8Q9UKJ3 1502 aaKnown RBP18.25■□□□□ 0.51
CLCF1-202ENST00000533438 HSPA2P54652 639 aa18.24■□□□□ 0.51
CLCF1-202ENST00000533438 KIDINS220Q9ULH0 1771 aa18.24■□□□□ 0.51
CLCF1-202ENST00000533438 MLECQ14165 292 aa18.22■□□□□ 0.51
CLCF1-202ENST00000533438 CERKQ8TCT0 537 aa18.22■□□□□ 0.51
CLCF1-202ENST00000533438 EHBP1L1Q8N3D4 1523 aa18.2■□□□□ 0.5
CLCF1-202ENST00000533438 SYCP2Q9BX26 1530 aa18.2■□□□□ 0.5
CLCF1-202ENST00000533438 MTUS2Q5JR59 1369 aa18.19■□□□□ 0.5
CLCF1-202ENST00000533438 AGLP35573 1532 aa18.18■□□□□ 0.5
CLCF1-202ENST00000533438 TIAM1Q13009 1591 aa18.17■□□□□ 0.5
CLCF1-202ENST00000533438 MYT1LQ9UL68 1186 aa18.17■□□□□ 0.5
CLCF1-202ENST00000533438 CCNB3Q8WWL7 1395 aa18.17■□□□□ 0.5
CLCF1-202ENST00000533438 KIAA1107Q9UPP5 1409 aa18.15■□□□□ 0.5
CLCF1-202ENST00000533438 PLEKHH2Q8IVE3 1493 aa18.15■□□□□ 0.5
CLCF1-202ENST00000533438 ZNF777Q9ULD5 760 aaPredicted RBP18.15■□□□□ 0.5
CLCF1-202ENST00000533438 DMRT2Q9Y5R5 561 aa18.14■□□□□ 0.49
CLCF1-202ENST00000533438 INO80Q9ULG1 1556 aaPredicted RBP18.13■□□□□ 0.49
CLCF1-202ENST00000533438 CFDP1Q9UEE9 299 aaPredicted RBP18.13■□□□□ 0.49
CLCF1-202ENST00000533438 PREX1Q8TCU6 1659 aa18.12■□□□□ 0.49
CLCF1-202ENST00000533438 HNRNPMP52272 730 aaKnown RBP eCLIP18.12■□□□□ 0.49
CLCF1-202ENST00000533438 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
CLCF1-202ENST00000533438 ATP7AQ04656 1500 aa18.12■□□□□ 0.49
CLCF1-202ENST00000533438 SUPT6HQ7KZ85 1726 aaKnown RBP18.1■□□□□ 0.49
CLCF1-202ENST00000533438 C3P01024 1663 aa18.1■□□□□ 0.49
CLCF1-202ENST00000533438 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
CLCF1-202ENST00000533438 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
CLCF1-202ENST00000533438 CEBPAP49715 358 aaPredicted RBP18.09■□□□□ 0.49
CLCF1-202ENST00000533438 PLXNC1O60486 1568 aa18.08■□□□□ 0.49
CLCF1-202ENST00000533438 VPS8Q8N3P4 1428 aa18.08■□□□□ 0.49
CLCF1-202ENST00000533438 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
CLCF1-202ENST00000533438 SETD1BQ9UPS6 1966 aaKnown RBP18.07■□□□□ 0.48
CLCF1-202ENST00000533438 NCOA2Q15596 1464 aa18.06■□□□□ 0.48
CLCF1-202ENST00000533438 ZNF644Q9H582 1327 aaPredicted RBP18.05■□□□□ 0.48
CLCF1-202ENST00000533438 ADGBQ8N7X0 1667 aa18.05■□□□□ 0.48
CLCF1-202ENST00000533438 MROH2AA6NES4 1674 aa18.04■□□□□ 0.48
CLCF1-202ENST00000533438 A2MP01023 1474 aa18.03■□□□□ 0.48
CLCF1-202ENST00000533438 PTPRTO14522 1441 aa18.03■□□□□ 0.48
CLCF1-202ENST00000533438 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
CLCF1-202ENST00000533438 STRCQ7RTU9 1775 aa18.02■□□□□ 0.47
CLCF1-202ENST00000533438 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
CLCF1-202ENST00000533438 UHRF1BP1Q6BDS2 1440 aa18.01■□□□□ 0.47
CLCF1-202ENST00000533438 MAP3K1Q13233 1512 aa18.01■□□□□ 0.47
CLCF1-202ENST00000533438 CAMSAP2Q08AD1 1489 aa18.01■□□□□ 0.47
CLCF1-202ENST00000533438 RTEL1-TNFRSF6BF6WH68 1400 aa18■□□□□ 0.47
CLCF1-202ENST00000533438 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
CLCF1-202ENST00000533438 CCDC141Q6ZP82 1450 aa17.98■□□□□ 0.47
CLCF1-202ENST00000533438 CLTCQ00610 1675 aaKnown RBP17.98■□□□□ 0.47
CLCF1-202ENST00000533438 ARHGEF5Q12774 1597 aa17.96■□□□□ 0.47
CLCF1-202ENST00000533438 ZMYM3Q14202 1370 aa17.93■□□□□ 0.46
CLCF1-202ENST00000533438 NPATQ14207 1427 aa17.93■□□□□ 0.46
CLCF1-202ENST00000533438 KANK4Q5T7N3 995 aaPredicted RBP17.93■□□□□ 0.46
CLCF1-202ENST00000533438 RSPH4AQ5TD94 716 aa17.93■□□□□ 0.46
CLCF1-202ENST00000533438 DHX29Q7Z478 1369 aaKnown RBP17.92■□□□□ 0.46
CLCF1-202ENST00000533438 IQSEC2Q5JU85 1478 aa17.92■□□□□ 0.46
CLCF1-202ENST00000533438 LTBP4Q8N2S1 1624 aa17.91■□□□□ 0.46
CLCF1-202ENST00000533438 ILDR2Q71H61 639 aa17.91■□□□□ 0.46
CLCF1-202ENST00000533438 SOCS7O14512 581 aa17.9■□□□□ 0.46
CLCF1-202ENST00000533438 GGT6Q6P531 493 aa17.9■□□□□ 0.46
CLCF1-202ENST00000533438 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
CLCF1-202ENST00000533438 NCOA1Q15788 1441 aa17.89■□□□□ 0.46
CLCF1-202ENST00000533438 MAST1Q9Y2H9 1570 aa17.88■□□□□ 0.45
CLCF1-202ENST00000533438 ZNF142P52746 1687 aaPredicted RBP17.88■□□□□ 0.45
CLCF1-202ENST00000533438 PTPRKQ15262 1439 aa17.88■□□□□ 0.45
CLCF1-202ENST00000533438 MYOM3Q5VTT5 1437 aa17.88■□□□□ 0.45
CLCF1-202ENST00000533438 MIA2Q96PC5 1412 aa17.88■□□□□ 0.45
CLCF1-202ENST00000533438 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms