RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 CCDC18Q5T9S5 1454 aa18.46■□□□□ 0.55
CLCF1-202ENST00000533438 CLIP1P30622 1438 aa18.45■□□□□ 0.54
CLCF1-202ENST00000533438 POGZQ7Z3K3 1410 aa18.44■□□□□ 0.54
CLCF1-202ENST00000533438 SCAPERQ9BY12 1400 aa18.44■□□□□ 0.54
CLCF1-202ENST00000533438 MAGI2Q86UL8 1455 aa18.44■□□□□ 0.54
CLCF1-202ENST00000533438 FYCO1Q9BQS8 1478 aa18.44■□□□□ 0.54
CLCF1-202ENST00000533438 SIGLEC1Q9BZZ2 1709 aa18.43■□□□□ 0.54
CLCF1-202ENST00000533438 CDC42BPBQ9Y5S2 1711 aa18.43■□□□□ 0.54
CLCF1-202ENST00000533438 ZFYVE16Q7Z3T8 1539 aa18.43■□□□□ 0.54
CLCF1-202ENST00000533438 MADDQ8WXG6 1647 aa18.42■□□□□ 0.54
CLCF1-202ENST00000533438 YEATS2Q9ULM3 1422 aa18.41■□□□□ 0.54
CLCF1-202ENST00000533438 EFCAB2Q5VUJ9 269 aa18.41■□□□□ 0.54
CLCF1-202ENST00000533438 LMTK3Q96Q04 1460 aa18.4■□□□□ 0.54
CLCF1-202ENST00000533438 ARHGAP5Q13017 1502 aa18.4■□□□□ 0.54
CLCF1-202ENST00000533438 PREX2Q70Z35 1606 aa18.4■□□□□ 0.54
CLCF1-202ENST00000533438 ARID4BQ4LE39 1312 aaPredicted RBP18.38■□□□□ 0.53
CLCF1-202ENST00000533438 KDM5CP41229 1560 aa18.37■□□□□ 0.53
CLCF1-202ENST00000533438 CDC42BPAQ5VT25 1732 aa18.37■□□□□ 0.53
CLCF1-202ENST00000533438 ZNF518AQ6AHZ1 1483 aa18.36■□□□□ 0.53
CLCF1-202ENST00000533438 RIMS1Q86UR5 1692 aaKnown RBP18.36■□□□□ 0.53
CLCF1-202ENST00000533438 ITSN2Q9NZM3 1697 aa18.32■□□□□ 0.52
CLCF1-202ENST00000533438 ABCC1P33527 1531 aa18.32■□□□□ 0.52
CLCF1-202ENST00000533438 ATP10AO60312 1499 aa18.32■□□□□ 0.52
CLCF1-202ENST00000533438 C9orf84Q5VXU9 1444 aa18.31■□□□□ 0.52
CLCF1-202ENST00000533438 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
CLCF1-202ENST00000533438 ARHGEF12Q9NZN5 1544 aa18.29■□□□□ 0.52
CLCF1-202ENST00000533438 AFAP1Q8N556 730 aa18.28■□□□□ 0.52
CLCF1-202ENST00000533438 DIP2CQ9Y2E4 1556 aa18.28■□□□□ 0.52
CLCF1-202ENST00000533438 CEP162Q5TB80 1403 aa18.27■□□□□ 0.52
CLCF1-202ENST00000533438 ABCA6Q8N139 1617 aa18.27■□□□□ 0.51
CLCF1-202ENST00000533438 MLH3Q9UHC1 1453 aa18.26■□□□□ 0.51
CLCF1-202ENST00000533438 REREQ9P2R6 1566 aa18.26■□□□□ 0.51
CLCF1-202ENST00000533438 TRAPPC8Q9Y2L5 1435 aa18.26■□□□□ 0.51
CLCF1-202ENST00000533438 SAMD9LQ8IVG5 1584 aa18.25■□□□□ 0.51
CLCF1-202ENST00000533438 GPATCH8Q9UKJ3 1502 aaKnown RBP18.25■□□□□ 0.51
CLCF1-202ENST00000533438 HSPA2P54652 639 aa18.24■□□□□ 0.51
CLCF1-202ENST00000533438 KIDINS220Q9ULH0 1771 aa18.24■□□□□ 0.51
CLCF1-202ENST00000533438 MLECQ14165 292 aa18.22■□□□□ 0.51
CLCF1-202ENST00000533438 CERKQ8TCT0 537 aa18.22■□□□□ 0.51
CLCF1-202ENST00000533438 EHBP1L1Q8N3D4 1523 aa18.2■□□□□ 0.5
CLCF1-202ENST00000533438 SYCP2Q9BX26 1530 aa18.2■□□□□ 0.5
CLCF1-202ENST00000533438 MTUS2Q5JR59 1369 aa18.19■□□□□ 0.5
CLCF1-202ENST00000533438 AGLP35573 1532 aa18.18■□□□□ 0.5
CLCF1-202ENST00000533438 TIAM1Q13009 1591 aa18.17■□□□□ 0.5
CLCF1-202ENST00000533438 MYT1LQ9UL68 1186 aa18.17■□□□□ 0.5
CLCF1-202ENST00000533438 CCNB3Q8WWL7 1395 aa18.17■□□□□ 0.5
CLCF1-202ENST00000533438 KIAA1107Q9UPP5 1409 aa18.15■□□□□ 0.5
CLCF1-202ENST00000533438 PLEKHH2Q8IVE3 1493 aa18.15■□□□□ 0.5
CLCF1-202ENST00000533438 ZNF777Q9ULD5 760 aaPredicted RBP18.15■□□□□ 0.5
CLCF1-202ENST00000533438 DMRT2Q9Y5R5 561 aa18.14■□□□□ 0.49
CLCF1-202ENST00000533438 INO80Q9ULG1 1556 aaPredicted RBP18.13■□□□□ 0.49
CLCF1-202ENST00000533438 CFDP1Q9UEE9 299 aaPredicted RBP18.13■□□□□ 0.49
CLCF1-202ENST00000533438 PREX1Q8TCU6 1659 aa18.12■□□□□ 0.49
CLCF1-202ENST00000533438 HNRNPMP52272 730 aaKnown RBP eCLIP18.12■□□□□ 0.49
CLCF1-202ENST00000533438 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
CLCF1-202ENST00000533438 ATP7AQ04656 1500 aa18.12■□□□□ 0.49
CLCF1-202ENST00000533438 SUPT6HQ7KZ85 1726 aaKnown RBP18.1■□□□□ 0.49
CLCF1-202ENST00000533438 C3P01024 1663 aa18.1■□□□□ 0.49
CLCF1-202ENST00000533438 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
CLCF1-202ENST00000533438 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
CLCF1-202ENST00000533438 CEBPAP49715 358 aaPredicted RBP18.09■□□□□ 0.49
CLCF1-202ENST00000533438 PLXNC1O60486 1568 aa18.08■□□□□ 0.49
CLCF1-202ENST00000533438 VPS8Q8N3P4 1428 aa18.08■□□□□ 0.49
CLCF1-202ENST00000533438 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
CLCF1-202ENST00000533438 SETD1BQ9UPS6 1966 aaKnown RBP18.07■□□□□ 0.48
CLCF1-202ENST00000533438 NCOA2Q15596 1464 aa18.06■□□□□ 0.48
CLCF1-202ENST00000533438 ZNF644Q9H582 1327 aaPredicted RBP18.05■□□□□ 0.48
CLCF1-202ENST00000533438 ADGBQ8N7X0 1667 aa18.05■□□□□ 0.48
CLCF1-202ENST00000533438 MROH2AA6NES4 1674 aa18.04■□□□□ 0.48
CLCF1-202ENST00000533438 A2MP01023 1474 aa18.03■□□□□ 0.48
CLCF1-202ENST00000533438 PTPRTO14522 1441 aa18.03■□□□□ 0.48
CLCF1-202ENST00000533438 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
CLCF1-202ENST00000533438 STRCQ7RTU9 1775 aa18.02■□□□□ 0.47
CLCF1-202ENST00000533438 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
CLCF1-202ENST00000533438 UHRF1BP1Q6BDS2 1440 aa18.01■□□□□ 0.47
CLCF1-202ENST00000533438 MAP3K1Q13233 1512 aa18.01■□□□□ 0.47
CLCF1-202ENST00000533438 CAMSAP2Q08AD1 1489 aa18.01■□□□□ 0.47
CLCF1-202ENST00000533438 RTEL1-TNFRSF6BF6WH68 1400 aa18■□□□□ 0.47
CLCF1-202ENST00000533438 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
CLCF1-202ENST00000533438 CCDC141Q6ZP82 1450 aa17.98■□□□□ 0.47
CLCF1-202ENST00000533438 CLTCQ00610 1675 aaKnown RBP17.98■□□□□ 0.47
CLCF1-202ENST00000533438 ARHGEF5Q12774 1597 aa17.96■□□□□ 0.47
CLCF1-202ENST00000533438 ZMYM3Q14202 1370 aa17.93■□□□□ 0.46
CLCF1-202ENST00000533438 NPATQ14207 1427 aa17.93■□□□□ 0.46
CLCF1-202ENST00000533438 KANK4Q5T7N3 995 aaPredicted RBP17.93■□□□□ 0.46
CLCF1-202ENST00000533438 RSPH4AQ5TD94 716 aa17.93■□□□□ 0.46
CLCF1-202ENST00000533438 DHX29Q7Z478 1369 aaKnown RBP17.92■□□□□ 0.46
CLCF1-202ENST00000533438 IQSEC2Q5JU85 1478 aa17.92■□□□□ 0.46
CLCF1-202ENST00000533438 LTBP4Q8N2S1 1624 aa17.91■□□□□ 0.46
CLCF1-202ENST00000533438 ILDR2Q71H61 639 aa17.91■□□□□ 0.46
CLCF1-202ENST00000533438 SOCS7O14512 581 aa17.9■□□□□ 0.46
CLCF1-202ENST00000533438 GGT6Q6P531 493 aa17.9■□□□□ 0.46
CLCF1-202ENST00000533438 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
CLCF1-202ENST00000533438 NCOA1Q15788 1441 aa17.89■□□□□ 0.46
CLCF1-202ENST00000533438 MAST1Q9Y2H9 1570 aa17.88■□□□□ 0.45
CLCF1-202ENST00000533438 ZNF142P52746 1687 aaPredicted RBP17.88■□□□□ 0.45
CLCF1-202ENST00000533438 PTPRKQ15262 1439 aa17.88■□□□□ 0.45
CLCF1-202ENST00000533438 MYOM3Q5VTT5 1437 aa17.88■□□□□ 0.45
CLCF1-202ENST00000533438 MIA2Q96PC5 1412 aa17.88■□□□□ 0.45
CLCF1-202ENST00000533438 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms