RNA–Protein interactions for RNA: ENST00000533348.5

GSDMD-213, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-213ENST00000533348 ZFYVE16Q7Z3T8 1539 aa24.67■■□□□ 1.54
GSDMD-213ENST00000533348 EFCAB2Q5VUJ9 269 aa24.67■■□□□ 1.54
GSDMD-213ENST00000533348 MADDQ8WXG6 1647 aa24.67■■□□□ 1.54
GSDMD-213ENST00000533348 CASKIN1Q8WXD9 1431 aa24.67■■□□□ 1.54
GSDMD-213ENST00000533348 POGZQ7Z3K3 1410 aa24.66■■□□□ 1.54
GSDMD-213ENST00000533348 PCF11O94913 1555 aaKnown RBP24.65■■□□□ 1.54
GSDMD-213ENST00000533348 CCDC18Q5T9S5 1454 aa24.64■■□□□ 1.54
GSDMD-213ENST00000533348 YEATS2Q9ULM3 1422 aa24.63■■□□□ 1.53
GSDMD-213ENST00000533348 SIGLEC1Q9BZZ2 1709 aa24.61■■□□□ 1.53
GSDMD-213ENST00000533348 CDC42BPBQ9Y5S2 1711 aa24.61■■□□□ 1.53
GSDMD-213ENST00000533348 ARHGAP5Q13017 1502 aa24.6■■□□□ 1.53
GSDMD-213ENST00000533348 RIMS1Q86UR5 1692 aaKnown RBP24.59■■□□□ 1.53
GSDMD-213ENST00000533348 FYCO1Q9BQS8 1478 aa24.58■■□□□ 1.52
GSDMD-213ENST00000533348 ZNF518AQ6AHZ1 1483 aa24.56■■□□□ 1.52
GSDMD-213ENST00000533348 PREX2Q70Z35 1606 aa24.55■■□□□ 1.52
GSDMD-213ENST00000533348 ATP10AO60312 1499 aa24.55■■□□□ 1.52
GSDMD-213ENST00000533348 KDM5CP41229 1560 aa24.54■■□□□ 1.52
GSDMD-213ENST00000533348 CDC42BPAQ5VT25 1732 aa24.51■■□□□ 1.51
GSDMD-213ENST00000533348 FER1L4A9Z1Z3 1794 aa24.51■■□□□ 1.51
GSDMD-213ENST00000533348 C9orf84Q5VXU9 1444 aa24.51■■□□□ 1.51
GSDMD-213ENST00000533348 AFAP1Q8N556 730 aa24.48■■□□□ 1.51
GSDMD-213ENST00000533348 ITSN2Q9NZM3 1697 aa24.46■■□□□ 1.51
GSDMD-213ENST00000533348 ABCC1P33527 1531 aa24.45■■□□□ 1.51
GSDMD-213ENST00000533348 ARHGEF12Q9NZN5 1544 aa24.45■■□□□ 1.5
GSDMD-213ENST00000533348 LMTK3Q96Q04 1460 aa24.45■■□□□ 1.5
GSDMD-213ENST00000533348 MLECQ14165 292 aa24.44■■□□□ 1.5
GSDMD-213ENST00000533348 ILDR1Q86SU0 546 aaPredicted RBP24.44■■□□□ 1.5
GSDMD-213ENST00000533348 MLH3Q9UHC1 1453 aa24.44■■□□□ 1.5
GSDMD-213ENST00000533348 REREQ9P2R6 1566 aa24.42■■□□□ 1.5
GSDMD-213ENST00000533348 DIP2CQ9Y2E4 1556 aa24.42■■□□□ 1.5
GSDMD-213ENST00000533348 ABCA6Q8N139 1617 aa24.39■■□□□ 1.5
GSDMD-213ENST00000533348 TRAPPC8Q9Y2L5 1435 aa24.39■■□□□ 1.5
GSDMD-213ENST00000533348 MYT1LQ9UL68 1186 aa24.39■■□□□ 1.49
GSDMD-213ENST00000533348 KIDINS220Q9ULH0 1771 aa24.37■■□□□ 1.49
GSDMD-213ENST00000533348 GPATCH8Q9UKJ3 1502 aaKnown RBP24.36■■□□□ 1.49
GSDMD-213ENST00000533348 SAMD9LQ8IVG5 1584 aa24.35■■□□□ 1.49
GSDMD-213ENST00000533348 PLPPR3Q6T4P5 718 aa24.34■■□□□ 1.49
GSDMD-213ENST00000533348 AGLP35573 1532 aa24.33■■□□□ 1.49
GSDMD-213ENST00000533348 SETD1BQ9UPS6 1966 aaKnown RBP24.32■■□□□ 1.48
GSDMD-213ENST00000533348 MTUS2Q5JR59 1369 aa24.3■■□□□ 1.48
GSDMD-213ENST00000533348 ZNF777Q9ULD5 760 aaPredicted RBP24.3■■□□□ 1.48
GSDMD-213ENST00000533348 PREX1Q8TCU6 1659 aa24.3■■□□□ 1.48
GSDMD-213ENST00000533348 CEP162Q5TB80 1403 aa24.29■■□□□ 1.48
GSDMD-213ENST00000533348 SYCP2Q9BX26 1530 aa24.29■■□□□ 1.48
GSDMD-213ENST00000533348 CCNB3Q8WWL7 1395 aa24.28■■□□□ 1.48
GSDMD-213ENST00000533348 KIAA1107Q9UPP5 1409 aa24.27■■□□□ 1.48
GSDMD-213ENST00000533348 PLEKHH2Q8IVE3 1493 aa24.27■■□□□ 1.48
GSDMD-213ENST00000533348 HSPA2P54652 639 aa24.26■■□□□ 1.47
GSDMD-213ENST00000533348 CFDP1Q9UEE9 299 aaPredicted RBP24.26■■□□□ 1.47
GSDMD-213ENST00000533348 EHBP1L1Q8N3D4 1523 aa24.25■■□□□ 1.47
GSDMD-213ENST00000533348 CEBPAP49715 358 aaPredicted RBP24.24■■□□□ 1.47
GSDMD-213ENST00000533348 HNRNPMP52272 730 aaKnown RBP eCLIP24.24■■□□□ 1.47
GSDMD-213ENST00000533348 C3P01024 1663 aa24.23■■□□□ 1.47
GSDMD-213ENST00000533348 SPAG9O60271 1321 aaKnown RBP24.22■■□□□ 1.47
GSDMD-213ENST00000533348 TIAM1Q13009 1591 aa24.21■■□□□ 1.47
GSDMD-213ENST00000533348 INO80Q9ULG1 1556 aaPredicted RBP24.2■■□□□ 1.46
GSDMD-213ENST00000533348 ATP7AQ04656 1500 aa24.2■■□□□ 1.46
GSDMD-213ENST00000533348 ESF1Q9H501 851 aaKnown RBP24.18■■□□□ 1.46
GSDMD-213ENST00000533348 SUPT6HQ7KZ85 1726 aaKnown RBP24.18■■□□□ 1.46
GSDMD-213ENST00000533348 FBXO41Q8TF61 875 aa24.17■■□□□ 1.46
GSDMD-213ENST00000533348 CNTLNQ9NXG0 1405 aa24.17■■□□□ 1.46
GSDMD-213ENST00000533348 MROH2AA6NES4 1674 aa24.15■■□□□ 1.46
GSDMD-213ENST00000533348 UHRF1BP1Q6BDS2 1440 aa24.15■■□□□ 1.46
GSDMD-213ENST00000533348 PLXNC1O60486 1568 aa24.14■■□□□ 1.45
GSDMD-213ENST00000533348 ADGBQ8N7X0 1667 aa24.13■■□□□ 1.45
GSDMD-213ENST00000533348 STRCQ7RTU9 1775 aa24.11■■□□□ 1.45
GSDMD-213ENST00000533348 A2MP01023 1474 aa24.11■■□□□ 1.45
GSDMD-213ENST00000533348 MBD5Q9P267 1494 aa24.11■■□□□ 1.45
GSDMD-213ENST00000533348 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
GSDMD-213ENST00000533348 NCOA2Q15596 1464 aa24.08■■□□□ 1.45
GSDMD-213ENST00000533348 LOC105371045A0A1W2PR82 267 aa24.07■■□□□ 1.44
GSDMD-213ENST00000533348 RTEL1-TNFRSF6BF6WH68 1400 aa24.07■■□□□ 1.44
GSDMD-213ENST00000533348 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
GSDMD-213ENST00000533348 DMRT2Q9Y5R5 561 aa24.05■■□□□ 1.44
GSDMD-213ENST00000533348 CLTCQ00610 1675 aaKnown RBP24.05■■□□□ 1.44
GSDMD-213ENST00000533348 NPATQ14207 1427 aa24.04■■□□□ 1.44
GSDMD-213ENST00000533348 ZMYM3Q14202 1370 aa24.03■■□□□ 1.44
GSDMD-213ENST00000533348 RSPH4AQ5TD94 716 aa24.02■■□□□ 1.44
GSDMD-213ENST00000533348 PPP6R1Q9UPN7 881 aa24.02■■□□□ 1.44
GSDMD-213ENST00000533348 CAMSAP2Q08AD1 1489 aa24.01■■□□□ 1.43
GSDMD-213ENST00000533348 CCDC141Q6ZP82 1450 aa24■■□□□ 1.43
GSDMD-213ENST00000533348 LRRC9Q6ZRR7 1453 aa24■■□□□ 1.43
GSDMD-213ENST00000533348 MAP3K1Q13233 1512 aa23.99■■□□□ 1.43
GSDMD-213ENST00000533348 GGT6Q6P531 493 aa23.98■■□□□ 1.43
GSDMD-213ENST00000533348 CERKQ8TCT0 537 aa23.98■■□□□ 1.43
GSDMD-213ENST00000533348 ARHGEF5Q12774 1597 aa23.97■■□□□ 1.43
GSDMD-213ENST00000533348 DHX29Q7Z478 1369 aaKnown RBP23.97■■□□□ 1.43
GSDMD-213ENST00000533348 PTPRTO14522 1441 aa23.95■■□□□ 1.42
GSDMD-213ENST00000533348 PTPRKQ15262 1439 aa23.93■■□□□ 1.42
GSDMD-213ENST00000533348 ZNF142P52746 1687 aaPredicted RBP23.92■■□□□ 1.42
GSDMD-213ENST00000533348 NCOA1Q15788 1441 aa23.92■■□□□ 1.42
GSDMD-213ENST00000533348 MYO3AQ8NEV4 1616 aa23.91■■□□□ 1.42
GSDMD-213ENST00000533348 CAMSAP1Q5T5Y3 1602 aa23.89■■□□□ 1.42
GSDMD-213ENST00000533348 FAM135AQ9P2D6 1515 aa23.89■■□□□ 1.41
GSDMD-213ENST00000533348 TSPY4P0CV99 314 aa23.88■■□□□ 1.41
GSDMD-213ENST00000533348 TSPY10P0CW01 314 aa23.88■■□□□ 1.41
GSDMD-213ENST00000533348 KIF3BO15066 747 aa23.87■■□□□ 1.41
GSDMD-213ENST00000533348 KANK4Q5T7N3 995 aaPredicted RBP23.87■■□□□ 1.41
GSDMD-213ENST00000533348 MAST1Q9Y2H9 1570 aa23.86■■□□□ 1.41
GSDMD-213ENST00000533348 CEP170BQ9Y4F5 1589 aaPredicted RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms