RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-223ENST00000533299 FBXO3Q9UK99 471 aa9.36□□□□□ -0.91
LMO7-223ENST00000533299 ADGRD1Q6QNK2 874 aa9.35□□□□□ -0.91
LMO7-223ENST00000533299 POTEEQ6S8J3 1075 aa9.34□□□□□ -0.91
LMO7-223ENST00000533299 KHSRPQ92945 711 aaKnown RBP eCLIP9.33□□□□□ -0.92
LMO7-223ENST00000533299 TK2O00142 265 aa9.32□□□□□ -0.92
LMO7-223ENST00000533299 AXIN2Q9Y2T1 843 aa9.3□□□□□ -0.92
LMO7-223ENST00000533299 A0A0G2JS52 829 aa9.28□□□□□ -0.92
LMO7-223ENST00000533299 ARHGAP33O14559 1287 aa9.28□□□□□ -0.92
LMO7-223ENST00000533299 HRO43593 1189 aa9.28□□□□□ -0.92
LMO7-223ENST00000533299 EFCAB3Q8N7B9 438 aa9.26□□□□□ -0.93
LMO7-223ENST00000533299 LHX6Q9UPM6 363 aa9.24□□□□□ -0.93
LMO7-223ENST00000533299 KCTD12Q96CX2 325 aaKnown RBP9.24□□□□□ -0.93
LMO7-223ENST00000533299 PSDA5PKW4 1024 aaPredicted RBP9.22□□□□□ -0.93
LMO7-223ENST00000533299 NUDT7P0C024 238 aa9.22□□□□□ -0.93
LMO7-223ENST00000533299 Q6ZNB5 142 aa9.22□□□□□ -0.93
LMO7-223ENST00000533299 KLHL34Q8N239 644 aa9.21□□□□□ -0.93
LMO7-223ENST00000533299 SOX12O15370 315 aa9.21□□□□□ -0.94
LMO7-223ENST00000533299 STAC3Q96MF2 364 aa9.19□□□□□ -0.94
LMO7-223ENST00000533299 SLC34A2O95436 690 aa9.17□□□□□ -0.94
LMO7-223ENST00000533299 PCDHGA4Q9Y5G9 962 aa9.15□□□□□ -0.95
LMO7-223ENST00000533299 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
LMO7-223ENST00000533299 MS4A4AQ96JQ5 239 aa9.14□□□□□ -0.95
LMO7-223ENST00000533299 AMER1Q5JTC6 1135 aaPredicted RBP9.13□□□□□ -0.95
LMO7-223ENST00000533299 DMRTA1Q5VZB9 504 aa9.12□□□□□ -0.95
LMO7-223ENST00000533299 LAPTM4AQ15012 233 aa9.12□□□□□ -0.95
LMO7-223ENST00000533299 PTPN5P54829 565 aa9.11□□□□□ -0.95
LMO7-223ENST00000533299 KIF3CO14782 793 aa9.08□□□□□ -0.96
LMO7-223ENST00000533299 PSEN2P49810 448 aa9.05□□□□□ -0.96
LMO7-223ENST00000533299 PHF8Q9UPP1 1060 aa9.04□□□□□ -0.96
LMO7-223ENST00000533299 TRAF7Q6Q0C0 670 aa9.03□□□□□ -0.96
LMO7-223ENST00000533299 THSD4Q6ZMP0 1018 aa9.03□□□□□ -0.96
LMO7-223ENST00000533299 CIZ1Q9ULV3 898 aaPredicted RBP9.03□□□□□ -0.96
LMO7-223ENST00000533299 TRIM41Q8WV44 630 aa9.02□□□□□ -0.97
LMO7-223ENST00000533299 C2orf72A6NCS6 295 aa9.01□□□□□ -0.97
LMO7-223ENST00000533299 KDM4FA0A1W2PPD8 638 aa9□□□□□ -0.97
LMO7-223ENST00000533299 KCNH8Q96L42 1107 aa9□□□□□ -0.97
LMO7-223ENST00000533299 PPP4R3BQ5MIZ7 849 aa8.99□□□□□ -0.97
LMO7-223ENST00000533299 RTN4Q9NQC3 1192 aaKnown RBP8.99□□□□□ -0.97
LMO7-223ENST00000533299 LCE2BO14633 110 aa8.98□□□□□ -0.97
LMO7-223ENST00000533299 IFNLR1Q8IU57 520 aaPredicted RBP8.98□□□□□ -0.97
LMO7-223ENST00000533299 SPOCK2Q92563 424 aa8.98□□□□□ -0.97
LMO7-223ENST00000533299 VPS9D1Q9Y2B5 631 aa8.98□□□□□ -0.97
LMO7-223ENST00000533299 NLRP6P59044 892 aa8.98□□□□□ -0.97
LMO7-223ENST00000533299 SLC4A5Q9BY07 1137 aa8.98□□□□□ -0.97
LMO7-223ENST00000533299 ITGBL1O95965 494 aaPredicted RBP8.96□□□□□ -0.97
LMO7-223ENST00000533299 GOLGA8CPA6NN73 597 aa8.92□□□□□ -0.98
LMO7-223ENST00000533299 WNT2BQ93097 391 aa8.91□□□□□ -0.98
LMO7-223ENST00000533299 BHMG1C9JSJ3 638 aaPredicted RBP8.91□□□□□ -0.98
LMO7-223ENST00000533299 KCNK17Q96T54 332 aa8.91□□□□□ -0.98
LMO7-223ENST00000533299 FBXO22Q8NEZ5 403 aa8.9□□□□□ -0.98
LMO7-223ENST00000533299 PTCD2Q8WV60 388 aaKnown RBP8.9□□□□□ -0.98
LMO7-223ENST00000533299 GFRA3O60609 400 aa8.89□□□□□ -0.99
LMO7-223ENST00000533299 TMC2Q8TDI7 906 aa8.89□□□□□ -0.99
LMO7-223ENST00000533299 ZNF787Q6DD87 383 aa8.87□□□□□ -0.99
LMO7-223ENST00000533299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.86□□□□□ -0.99
LMO7-223ENST00000533299 ZFP91Q96JP5 570 aaPredicted RBP8.86□□□□□ -0.99
LMO7-223ENST00000533299 VGFO15240 615 aaPredicted RBP8.85□□□□□ -0.99
LMO7-223ENST00000533299 NRG2O14511 850 aaPredicted RBP8.84□□□□□ -0.99
LMO7-223ENST00000533299 RIOK3O14730 519 aaKnown RBP8.84□□□□□ -0.99
LMO7-223ENST00000533299 MRPL50Q8N5N7 158 aaKnown RBP8.84□□□□□ -0.99
LMO7-223ENST00000533299 ZNF775Q96BV0 537 aaPredicted RBP8.84□□□□□ -0.99
LMO7-223ENST00000533299 TBC1D12O60347 775 aa8.8□□□□□ -1
LMO7-223ENST00000533299 NYAP1Q6ZVC0 841 aa8.8□□□□□ -1
LMO7-223ENST00000533299 NBPF3Q9H094 633 aa8.79□□□□□ -1
LMO7-223ENST00000533299 BCL2L12Q9HB09 334 aa8.79□□□□□ -1
LMO7-223ENST00000533299 KCNC4Q03721 635 aa8.78□□□□□ -1
LMO7-223ENST00000533299 ZBED2Q9BTP6 218 aa8.76□□□□□ -1.01
LMO7-223ENST00000533299 MFRPQ9BY79 579 aa8.74□□□□□ -1.01
LMO7-223ENST00000533299 PKD2Q13563 968 aa8.73□□□□□ -1.01
LMO7-223ENST00000533299 ECM2O94769 699 aaPredicted RBP8.73□□□□□ -1.01
LMO7-223ENST00000533299 PTPREP23469 700 aa8.73□□□□□ -1.01
LMO7-223ENST00000533299 ANKK1Q8NFD2 765 aa8.73□□□□□ -1.01
LMO7-223ENST00000533299 RNF25Q96BH1 459 aaPredicted RBP8.7□□□□□ -1.02
LMO7-223ENST00000533299 DCAF8L2P0C7V8 631 aa8.7□□□□□ -1.02
LMO7-223ENST00000533299 TAOK2Q9UL54 1235 aa8.7□□□□□ -1.02
LMO7-223ENST00000533299 FOXK1P85037 733 aa8.68□□□□□ -1.02
LMO7-223ENST00000533299 ZNF454Q8N9F8 522 aa8.68□□□□□ -1.02
LMO7-223ENST00000533299 PLPP6Q8IY26 295 aa8.66□□□□□ -1.02
LMO7-223ENST00000533299 LOC100996750A0A140TA64 210 aa8.66□□□□□ -1.02
LMO7-223ENST00000533299 KRTAP4-6Q9BYQ5 205 aa8.66□□□□□ -1.02
LMO7-223ENST00000533299 BCL11BQ9C0K0 894 aaPredicted RBP8.66□□□□□ -1.02
LMO7-223ENST00000533299 V9GY48 417 aaPredicted RBP8.66□□□□□ -1.02
LMO7-223ENST00000533299 SOWAHBA6NEL2 793 aa8.64□□□□□ -1.03
LMO7-223ENST00000533299 PRKD2Q9BZL6 878 aa8.64□□□□□ -1.03
LMO7-223ENST00000533299 FOSBP53539 338 aa8.63□□□□□ -1.03
LMO7-223ENST00000533299 LAPTM4BQ86VI4 370 aa8.63□□□□□ -1.03
LMO7-223ENST00000533299 RABGEF1Q9UJ41 708 aa8.61□□□□□ -1.03
LMO7-223ENST00000533299 BCAMP50895 628 aa8.61□□□□□ -1.03
LMO7-223ENST00000533299 STK24Q9Y6E0 443 aa8.61□□□□□ -1.03
LMO7-223ENST00000533299 TREML4Q6UXN2 200 aa8.59□□□□□ -1.03
LMO7-223ENST00000533299 RGL2O15211 777 aa8.57□□□□□ -1.04
LMO7-223ENST00000533299 OXER1Q8TDS5 423 aa8.57□□□□□ -1.04
LMO7-223ENST00000533299 GPHNQ9NQX3 736 aaPredicted RBP8.57□□□□□ -1.04
LMO7-223ENST00000533299 WBP1LQ9NX94 342 aa8.57□□□□□ -1.04
LMO7-223ENST00000533299 PDZRN3Q9UPQ7 1066 aa8.57□□□□□ -1.04
LMO7-223ENST00000533299 STK17AQ9UEE5 414 aa8.57□□□□□ -1.04
LMO7-223ENST00000533299 LCE2AQ5TA79 106 aaPredicted RBP8.55□□□□□ -1.04
LMO7-223ENST00000533299 JPH4Q96JJ6 628 aa8.55□□□□□ -1.04
LMO7-223ENST00000533299 ZDHHC16Q969W1 377 aa8.54□□□□□ -1.04
LMO7-223ENST00000533299 PPP1R3GB7ZBB8 358 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms