RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 PLCH2O75038 1416 aa17.36■□□□□ 0.37
GMDS-210ENST00000533279 MIA2Q96PC5 1412 aa17.36■□□□□ 0.37
GMDS-210ENST00000533279 MAP3K4Q9Y6R4 1608 aa17.35■□□□□ 0.37
GMDS-210ENST00000533279 PHLDB1Q86UU1 1377 aa17.34■□□□□ 0.37
GMDS-210ENST00000533279 GPATCH8Q9UKJ3 1502 aaKnown RBP17.34■□□□□ 0.37
GMDS-210ENST00000533279 CDC42BPAQ5VT25 1732 aa17.33■□□□□ 0.37
GMDS-210ENST00000533279 ZNF777Q9ULD5 760 aaPredicted RBP17.33■□□□□ 0.36
GMDS-210ENST00000533279 KIF13AQ9H1H9 1805 aa17.33■□□□□ 0.36
GMDS-210ENST00000533279 FANCAO15360 1455 aa17.32■□□□□ 0.36
GMDS-210ENST00000533279 PLEKHH2Q8IVE3 1493 aa17.32■□□□□ 0.36
GMDS-210ENST00000533279 FGD6Q6ZV73 1430 aa17.32■□□□□ 0.36
GMDS-210ENST00000533279 FAM50AQ14320 339 aaKnown RBP17.29■□□□□ 0.36
GMDS-210ENST00000533279 NEO1Q92859 1461 aa17.29■□□□□ 0.36
GMDS-210ENST00000533279 TSPOAP1O95153 1857 aa17.28■□□□□ 0.36
GMDS-210ENST00000533279 PTPN23Q9H3S7 1636 aa17.28■□□□□ 0.36
GMDS-210ENST00000533279 CDC42BPBQ9Y5S2 1711 aa17.27■□□□□ 0.36
GMDS-210ENST00000533279 CAMSAP2Q08AD1 1489 aa17.26■□□□□ 0.35
GMDS-210ENST00000533279 AKNAQ7Z591 1439 aa17.25■□□□□ 0.35
GMDS-210ENST00000533279 RRBP1Q9P2E9 1410 aaKnown RBP17.25■□□□□ 0.35
GMDS-210ENST00000533279 ADGRL1O94910 1474 aa17.24■□□□□ 0.35
GMDS-210ENST00000533279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.24■□□□□ 0.35
GMDS-210ENST00000533279 RSPH4AQ5TD94 716 aa17.23■□□□□ 0.35
GMDS-210ENST00000533279 TCOF1Q13428 1488 aaKnown RBP17.23■□□□□ 0.35
GMDS-210ENST00000533279 KIAA1107Q9UPP5 1409 aa17.22■□□□□ 0.35
GMDS-210ENST00000533279 SAMD9LQ8IVG5 1584 aa17.21■□□□□ 0.35
GMDS-210ENST00000533279 ABCC1P33527 1531 aa17.21■□□□□ 0.34
GMDS-210ENST00000533279 SYCP2Q9BX26 1530 aa17.2■□□□□ 0.34
GMDS-210ENST00000533279 SCAPERQ9BY12 1400 aa17.2■□□□□ 0.34
GMDS-210ENST00000533279 DENND4BO75064 1496 aaPredicted RBP17.19■□□□□ 0.34
GMDS-210ENST00000533279 TRIM26Q12899 539 aaPredicted RBP17.19■□□□□ 0.34
GMDS-210ENST00000533279 PPRC1Q5VV67 1664 aaKnown RBP17.19■□□□□ 0.34
GMDS-210ENST00000533279 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
GMDS-210ENST00000533279 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
GMDS-210ENST00000533279 MYT1LQ9UL68 1186 aa17.18■□□□□ 0.34
GMDS-210ENST00000533279 CCDC141Q6ZP82 1450 aa17.18■□□□□ 0.34
GMDS-210ENST00000533279 ZNF518AQ6AHZ1 1483 aa17.17■□□□□ 0.34
GMDS-210ENST00000533279 ZNF644Q9H582 1327 aaPredicted RBP17.17■□□□□ 0.34
GMDS-210ENST00000533279 ARHGEF5Q12774 1597 aa17.16■□□□□ 0.34
GMDS-210ENST00000533279 ITGAEP38570 1179 aa17.15■□□□□ 0.34
GMDS-210ENST00000533279 HNRNPMP52272 730 aaKnown RBP eCLIP17.15■□□□□ 0.347e-6■□□□□ 9.7
GMDS-210ENST00000533279 DNMT1P26358 1616 aaKnown RBP17.14■□□□□ 0.33
GMDS-210ENST00000533279 DAPK1P53355 1430 aa17.13■□□□□ 0.33
GMDS-210ENST00000533279 POGZQ7Z3K3 1410 aa17.13■□□□□ 0.33
GMDS-210ENST00000533279 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
GMDS-210ENST00000533279 KDM6BO15054 1643 aa17.12■□□□□ 0.33
GMDS-210ENST00000533279 SPAG9O60271 1321 aaKnown RBP17.12■□□□□ 0.33
GMDS-210ENST00000533279 MBD5Q9P267 1494 aa17.1■□□□□ 0.33
GMDS-210ENST00000533279 C9orf84Q5VXU9 1444 aa17.09■□□□□ 0.33
GMDS-210ENST00000533279 CROCC2H7BZ55 1655 aa17.09■□□□□ 0.33
GMDS-210ENST00000533279 ARHGEF12Q9NZN5 1544 aa17.08■□□□□ 0.32
GMDS-210ENST00000533279 ABCC5O15440 1437 aa17.08■□□□□ 0.32
GMDS-210ENST00000533279 TRAPPC8Q9Y2L5 1435 aa17.08■□□□□ 0.32
GMDS-210ENST00000533279 ANKRD30AQ9BXX3 1397 aa17.08■□□□□ 0.32
GMDS-210ENST00000533279 HECW2Q9P2P5 1572 aa17.06■□□□□ 0.32
GMDS-210ENST00000533279 RTEL1-TNFRSF6BF6WH68 1400 aa17.06■□□□□ 0.32
GMDS-210ENST00000533279 RAPGEF3O95398 923 aa17.06■□□□□ 0.32
GMDS-210ENST00000533279 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
GMDS-210ENST00000533279 KDM5CP41229 1560 aa17.06■□□□□ 0.32
GMDS-210ENST00000533279 MAST1Q9Y2H9 1570 aa17.06■□□□□ 0.32
GMDS-210ENST00000533279 RICTORQ6R327 1708 aa17.05■□□□□ 0.32
GMDS-210ENST00000533279 ADGBQ8N7X0 1667 aa17.05■□□□□ 0.32
GMDS-210ENST00000533279 CHIC2Q9UKJ5 165 aa17.05■□□□□ 0.32
GMDS-210ENST00000533279 MAGI2Q86UL8 1455 aa17.05■□□□□ 0.32
GMDS-210ENST00000533279 ATP7AQ04656 1500 aa17.04■□□□□ 0.32
GMDS-210ENST00000533279 ZMYM4Q5VZL5 1548 aa17.04■□□□□ 0.32
GMDS-210ENST00000533279 ROCK1Q13464 1354 aa17.03■□□□□ 0.32
GMDS-210ENST00000533279 MLH3Q9UHC1 1453 aa17.03■□□□□ 0.32
GMDS-210ENST00000533279 ZFYVE16Q7Z3T8 1539 aa17.02■□□□□ 0.32
GMDS-210ENST00000533279 ADGRL2O95490 1459 aa17.01■□□□□ 0.31
GMDS-210ENST00000533279 PLXNC1O60486 1568 aa17.01■□□□□ 0.31
GMDS-210ENST00000533279 FRMPD1Q5SYB0 1578 aa17.01■□□□□ 0.31
GMDS-210ENST00000533279 INO80Q9ULG1 1556 aaPredicted RBP17.01■□□□□ 0.31
GMDS-210ENST00000533279 KIF15Q9NS87 1388 aa16.99■□□□□ 0.31
GMDS-210ENST00000533279 PCGF6Q9BYE7 350 aa16.98■□□□□ 0.31
GMDS-210ENST00000533279 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
GMDS-210ENST00000533279 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
GMDS-210ENST00000533279 COL17A1Q9UMD9 1497 aaPredicted RBP16.97■□□□□ 0.31
GMDS-210ENST00000533279 NCOA1Q15788 1441 aa16.96■□□□□ 0.31
GMDS-210ENST00000533279 ARHGEF40Q8TER5 1519 aa16.96■□□□□ 0.31
GMDS-210ENST00000533279 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.31
GMDS-210ENST00000533279 FOXD1Q16676 465 aa16.96■□□□□ 0.31
GMDS-210ENST00000533279 HFM1A2PYH4 1435 aa16.96■□□□□ 0.3
GMDS-210ENST00000533279 PTPRKQ15262 1439 aa16.96■□□□□ 0.3
GMDS-210ENST00000533279 KIDINS220Q9ULH0 1771 aa16.95■□□□□ 0.3
GMDS-210ENST00000533279 ATP10AO60312 1499 aa16.93■□□□□ 0.3
GMDS-210ENST00000533279 ERBINQ96RT1 1412 aa16.93■□□□□ 0.3
GMDS-210ENST00000533279 A2MP01023 1474 aa16.93■□□□□ 0.3
GMDS-210ENST00000533279 GCC2Q8IWJ2 1684 aa16.92■□□□□ 0.3
GMDS-210ENST00000533279 SETD5Q9C0A6 1442 aa16.92■□□□□ 0.3
GMDS-210ENST00000533279 ANKRD50Q9ULJ7 1429 aa16.92■□□□□ 0.3
GMDS-210ENST00000533279 DIP2CQ9Y2E4 1556 aa16.92■□□□□ 0.3
GMDS-210ENST00000533279 ABCA6Q8N139 1617 aa16.92■□□□□ 0.3
GMDS-210ENST00000533279 YEATS2Q9ULM3 1422 aa16.91■□□□□ 0.3
GMDS-210ENST00000533279 DHX29Q7Z478 1369 aaKnown RBP16.9■□□□□ 0.3
GMDS-210ENST00000533279 NAIPQ13075 1403 aa16.89■□□□□ 0.29
GMDS-210ENST00000533279 ARID4BQ4LE39 1312 aaPredicted RBP16.89■□□□□ 0.29
GMDS-210ENST00000533279 REREQ9P2R6 1566 aa16.88■□□□□ 0.29
GMDS-210ENST00000533279 EIF2AK4Q9P2K8 1649 aaKnown RBP16.88■□□□□ 0.29
GMDS-210ENST00000533279 KANK1Q14678 1352 aa16.86■□□□□ 0.29
GMDS-210ENST00000533279 KIF3BO15066 747 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms