RNA–Protein interactions for RNA: ENST00000533221.5

ZNF250-208, Transcript of zinc finger protein 250, humanhuman

TSL 3

Gene ZNF250, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-208ENST00000533221 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
ZNF250-208ENST00000533221 CLIP1P30622 1438 aa16.57■□□□□ 0.24
ZNF250-208ENST00000533221 SOCS7O14512 581 aa16.56■□□□□ 0.24
ZNF250-208ENST00000533221 ILDR2Q71H61 639 aa16.56■□□□□ 0.24
ZNF250-208ENST00000533221 PLCH2O75038 1416 aa16.54■□□□□ 0.24
ZNF250-208ENST00000533221 TROQ12816 1431 aaPredicted RBP16.54■□□□□ 0.24
ZNF250-208ENST00000533221 CERKQ8TCT0 537 aa16.54■□□□□ 0.24
ZNF250-208ENST00000533221 ZMYM4Q5VZL5 1548 aa16.54■□□□□ 0.24
ZNF250-208ENST00000533221 CASKIN1Q8WXD9 1431 aa16.53■□□□□ 0.24
ZNF250-208ENST00000533221 HSPA2P54652 639 aa16.53■□□□□ 0.24
ZNF250-208ENST00000533221 DISP3Q9P2K9 1392 aa16.52■□□□□ 0.24
ZNF250-208ENST00000533221 FYCO1Q9BQS8 1478 aa16.52■□□□□ 0.23
ZNF250-208ENST00000533221 ARID4BQ4LE39 1312 aaPredicted RBP16.51■□□□□ 0.23
ZNF250-208ENST00000533221 ZFYVE16Q7Z3T8 1539 aa16.5■□□□□ 0.23
ZNF250-208ENST00000533221 SIGLEC1Q9BZZ2 1709 aa16.5■□□□□ 0.23
ZNF250-208ENST00000533221 MAGI2Q86UL8 1455 aa16.49■□□□□ 0.23
ZNF250-208ENST00000533221 POGZQ7Z3K3 1410 aa16.49■□□□□ 0.23
ZNF250-208ENST00000533221 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
ZNF250-208ENST00000533221 SPATA31D1Q6ZQQ2 1576 aa16.48■□□□□ 0.23
ZNF250-208ENST00000533221 CEP162Q5TB80 1403 aa16.48■□□□□ 0.23
ZNF250-208ENST00000533221 SCAPERQ9BY12 1400 aa16.47■□□□□ 0.23
ZNF250-208ENST00000533221 FER1L4A9Z1Z3 1794 aa16.47■□□□□ 0.23
ZNF250-208ENST00000533221 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
ZNF250-208ENST00000533221 PREX2Q70Z35 1606 aa16.47■□□□□ 0.23
ZNF250-208ENST00000533221 CDC42BPBQ9Y5S2 1711 aa16.45■□□□□ 0.22
ZNF250-208ENST00000533221 ZNF518AQ6AHZ1 1483 aa16.44■□□□□ 0.22
ZNF250-208ENST00000533221 PREX1Q8TCU6 1659 aa16.43■□□□□ 0.22
ZNF250-208ENST00000533221 YEATS2Q9ULM3 1422 aa16.42■□□□□ 0.22
ZNF250-208ENST00000533221 CDC42BPAQ5VT25 1732 aa16.41■□□□□ 0.22
ZNF250-208ENST00000533221 KDM5CP41229 1560 aa16.4■□□□□ 0.22
ZNF250-208ENST00000533221 STRCQ7RTU9 1775 aa16.4■□□□□ 0.22
ZNF250-208ENST00000533221 ABCC1P33527 1531 aa16.39■□□□□ 0.21
ZNF250-208ENST00000533221 C9orf84Q5VXU9 1444 aa16.38■□□□□ 0.21
ZNF250-208ENST00000533221 ITSN2Q9NZM3 1697 aa16.38■□□□□ 0.21
ZNF250-208ENST00000533221 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
ZNF250-208ENST00000533221 ATP10AO60312 1499 aa16.37■□□□□ 0.21
ZNF250-208ENST00000533221 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
ZNF250-208ENST00000533221 MYT1LQ9UL68 1186 aa16.33■□□□□ 0.2
ZNF250-208ENST00000533221 REREQ9P2R6 1566 aa16.33■□□□□ 0.2
ZNF250-208ENST00000533221 DIP2CQ9Y2E4 1556 aa16.33■□□□□ 0.2
ZNF250-208ENST00000533221 MTUS2Q5JR59 1369 aa16.32■□□□□ 0.2
ZNF250-208ENST00000533221 ABCA6Q8N139 1617 aa16.32■□□□□ 0.2
ZNF250-208ENST00000533221 EHBP1L1Q8N3D4 1523 aa16.32■□□□□ 0.2
ZNF250-208ENST00000533221 MLH3Q9UHC1 1453 aa16.32■□□□□ 0.2
ZNF250-208ENST00000533221 SAMD9LQ8IVG5 1584 aa16.3■□□□□ 0.2
ZNF250-208ENST00000533221 AFAP1Q8N556 730 aa16.3■□□□□ 0.2
ZNF250-208ENST00000533221 MLECQ14165 292 aa16.29■□□□□ 0.2
ZNF250-208ENST00000533221 SYCP2Q9BX26 1530 aa16.29■□□□□ 0.2
ZNF250-208ENST00000533221 GPATCH8Q9UKJ3 1502 aaKnown RBP16.29■□□□□ 0.2
ZNF250-208ENST00000533221 PLEKHH2Q8IVE3 1493 aa16.28■□□□□ 0.2
ZNF250-208ENST00000533221 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
ZNF250-208ENST00000533221 CCNB3Q8WWL7 1395 aa16.27■□□□□ 0.2
ZNF250-208ENST00000533221 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
ZNF250-208ENST00000533221 KIDINS220Q9ULH0 1771 aa16.27■□□□□ 0.2
ZNF250-208ENST00000533221 VPS8Q8N3P4 1428 aa16.27■□□□□ 0.19
ZNF250-208ENST00000533221 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
ZNF250-208ENST00000533221 ZNF777Q9ULD5 760 aaPredicted RBP16.25■□□□□ 0.19
ZNF250-208ENST00000533221 LTBP4Q8N2S1 1624 aa16.25■□□□□ 0.19
ZNF250-208ENST00000533221 TIAM1Q13009 1591 aa16.25■□□□□ 0.19
ZNF250-208ENST00000533221 AGLP35573 1532 aa16.24■□□□□ 0.19
ZNF250-208ENST00000533221 IQSEC2Q5JU85 1478 aa16.24■□□□□ 0.19
ZNF250-208ENST00000533221 CFDP1Q9UEE9 299 aaPredicted RBP16.24■□□□□ 0.19
ZNF250-208ENST00000533221 UHRF1BP1Q6BDS2 1440 aa16.24■□□□□ 0.19
ZNF250-208ENST00000533221 SUPT6HQ7KZ85 1726 aaKnown RBP16.24■□□□□ 0.19
ZNF250-208ENST00000533221 PTPRTO14522 1441 aa16.23■□□□□ 0.19
ZNF250-208ENST00000533221 KIAA1107Q9UPP5 1409 aa16.22■□□□□ 0.19
ZNF250-208ENST00000533221 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.19
ZNF250-208ENST00000533221 ATP7AQ04656 1500 aa16.21■□□□□ 0.19
ZNF250-208ENST00000533221 CEBPAP49715 358 aaPredicted RBP16.2■□□□□ 0.18
ZNF250-208ENST00000533221 C3P01024 1663 aa16.2■□□□□ 0.18
ZNF250-208ENST00000533221 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
ZNF250-208ENST00000533221 ESF1Q9H501 851 aaKnown RBP16.18■□□□□ 0.18
ZNF250-208ENST00000533221 HNRNPMP52272 730 aaKnown RBP eCLIP16.17■□□□□ 0.18
ZNF250-208ENST00000533221 ADGBQ8N7X0 1667 aa16.17■□□□□ 0.18
ZNF250-208ENST00000533221 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
ZNF250-208ENST00000533221 PLXNC1O60486 1568 aa16.15■□□□□ 0.18
ZNF250-208ENST00000533221 CNTLNQ9NXG0 1405 aa16.15■□□□□ 0.18
ZNF250-208ENST00000533221 MROH2AA6NES4 1674 aa16.14■□□□□ 0.18
ZNF250-208ENST00000533221 A2MP01023 1474 aa16.13■□□□□ 0.17
ZNF250-208ENST00000533221 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
ZNF250-208ENST00000533221 CAMSAP2Q08AD1 1489 aa16.11■□□□□ 0.17
ZNF250-208ENST00000533221 CCDC141Q6ZP82 1450 aa16.11■□□□□ 0.17
ZNF250-208ENST00000533221 LRRC9Q6ZRR7 1453 aa16.11■□□□□ 0.17
ZNF250-208ENST00000533221 MAP3K1Q13233 1512 aa16.11■□□□□ 0.17
ZNF250-208ENST00000533221 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
ZNF250-208ENST00000533221 RTEL1-TNFRSF6BF6WH68 1400 aa16.1■□□□□ 0.17
ZNF250-208ENST00000533221 CLTCQ00610 1675 aaKnown RBP16.08■□□□□ 0.17
ZNF250-208ENST00000533221 ZNF644Q9H582 1327 aaPredicted RBP16.08■□□□□ 0.16
ZNF250-208ENST00000533221 KANK4Q5T7N3 995 aaPredicted RBP16.07■□□□□ 0.16
ZNF250-208ENST00000533221 ARHGEF5Q12774 1597 aa16.07■□□□□ 0.16
ZNF250-208ENST00000533221 RSPH4AQ5TD94 716 aa16.06■□□□□ 0.16
ZNF250-208ENST00000533221 CAMSAP1Q5T5Y3 1602 aa16.05■□□□□ 0.16
ZNF250-208ENST00000533221 NPATQ14207 1427 aa16.04■□□□□ 0.16
ZNF250-208ENST00000533221 MED1Q15648 1581 aaPredicted RBP16.04■□□□□ 0.16
ZNF250-208ENST00000533221 ZMYM3Q14202 1370 aa16.01■□□□□ 0.15
ZNF250-208ENST00000533221 FAM135AQ9P2D6 1515 aa16.01■□□□□ 0.15
ZNF250-208ENST00000533221 APLP2Q06481 763 aa16.01■□□□□ 0.15
ZNF250-208ENST00000533221 GGT6Q6P531 493 aa16.01■□□□□ 0.15
ZNF250-208ENST00000533221 ZNF142P52746 1687 aaPredicted RBP16.01■□□□□ 0.15
ZNF250-208ENST00000533221 DHX29Q7Z478 1369 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms