RNA–Protein interactions for RNA: ENST00000533039.2

SOX9-AS1-210, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 426 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-210ENST00000533039 CASKIN1Q8WXD9 1431 aa14.21□□□□□ -0.13
SOX9-AS1-210ENST00000533039 ZMYM4Q5VZL5 1548 aa14.2□□□□□ -0.14
SOX9-AS1-210ENST00000533039 ADAMTSL3P82987 1691 aa14.2□□□□□ -0.14
SOX9-AS1-210ENST00000533039 FYCO1Q9BQS8 1478 aa14.19□□□□□ -0.14
SOX9-AS1-210ENST00000533039 CDC42BPBQ9Y5S2 1711 aa14.18□□□□□ -0.14
SOX9-AS1-210ENST00000533039 ARID4BQ4LE39 1312 aaPredicted RBP14.18□□□□□ -0.14
SOX9-AS1-210ENST00000533039 EFCAB2Q5VUJ9 269 aa14.18□□□□□ -0.14
SOX9-AS1-210ENST00000533039 ARHGAP5Q13017 1502 aa14.18□□□□□ -0.14
SOX9-AS1-210ENST00000533039 ZFYVE16Q7Z3T8 1539 aa14.18□□□□□ -0.14
SOX9-AS1-210ENST00000533039 HECW2Q9P2P5 1572 aa14.17□□□□□ -0.14
SOX9-AS1-210ENST00000533039 SCAPERQ9BY12 1400 aa14.17□□□□□ -0.14
SOX9-AS1-210ENST00000533039 MAGI2Q86UL8 1455 aa14.17□□□□□ -0.14
SOX9-AS1-210ENST00000533039 PREX2Q70Z35 1606 aa14.16□□□□□ -0.14
SOX9-AS1-210ENST00000533039 POGZQ7Z3K3 1410 aa14.15□□□□□ -0.14
SOX9-AS1-210ENST00000533039 CDC42BPAQ5VT25 1732 aa14.15□□□□□ -0.14
SOX9-AS1-210ENST00000533039 MADDQ8WXG6 1647 aa14.15□□□□□ -0.14
SOX9-AS1-210ENST00000533039 RIMS1Q86UR5 1692 aaKnown RBP14.13□□□□□ -0.15
SOX9-AS1-210ENST00000533039 PTPRMP28827 1452 aa14.12□□□□□ -0.15
SOX9-AS1-210ENST00000533039 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
SOX9-AS1-210ENST00000533039 SIGLEC1Q9BZZ2 1709 aa14.11□□□□□ -0.15
SOX9-AS1-210ENST00000533039 YEATS2Q9ULM3 1422 aa14.11□□□□□ -0.15
SOX9-AS1-210ENST00000533039 FER1L4A9Z1Z3 1794 aa14.11□□□□□ -0.15
SOX9-AS1-210ENST00000533039 ITSN2Q9NZM3 1697 aa14.1□□□□□ -0.15
SOX9-AS1-210ENST00000533039 KDM5CP41229 1560 aa14.09□□□□□ -0.15
SOX9-AS1-210ENST00000533039 ATP10AO60312 1499 aa14.08□□□□□ -0.16
SOX9-AS1-210ENST00000533039 MYT1LQ9UL68 1186 aa14.08□□□□□ -0.16
SOX9-AS1-210ENST00000533039 ABCC1P33527 1531 aa14.08□□□□□ -0.16
SOX9-AS1-210ENST00000533039 C9orf84Q5VXU9 1444 aa14.07□□□□□ -0.16
SOX9-AS1-210ENST00000533039 CEP162Q5TB80 1403 aa14.06□□□□□ -0.16
SOX9-AS1-210ENST00000533039 PIAS4Q8N2W9 510 aaPredicted RBP14.04□□□□□ -0.16
SOX9-AS1-210ENST00000533039 AFAP1Q8N556 730 aa14.04□□□□□ -0.16
SOX9-AS1-210ENST00000533039 MTUS2Q5JR59 1369 aa14.04□□□□□ -0.16
SOX9-AS1-210ENST00000533039 DIP2CQ9Y2E4 1556 aa14.04□□□□□ -0.16
SOX9-AS1-210ENST00000533039 MLECQ14165 292 aa14.03□□□□□ -0.16
SOX9-AS1-210ENST00000533039 ABCA6Q8N139 1617 aa14.03□□□□□ -0.16
SOX9-AS1-210ENST00000533039 SAMD9LQ8IVG5 1584 aa14.02□□□□□ -0.16
SOX9-AS1-210ENST00000533039 REREQ9P2R6 1566 aa14.02□□□□□ -0.16
SOX9-AS1-210ENST00000533039 MLH3Q9UHC1 1453 aa14.02□□□□□ -0.16
SOX9-AS1-210ENST00000533039 KIDINS220Q9ULH0 1771 aa14.01□□□□□ -0.17
SOX9-AS1-210ENST00000533039 ARHGEF12Q9NZN5 1544 aa14.01□□□□□ -0.17
SOX9-AS1-210ENST00000533039 ZNF777Q9ULD5 760 aaPredicted RBP14.01□□□□□ -0.17
SOX9-AS1-210ENST00000533039 EHBP1L1Q8N3D4 1523 aa14□□□□□ -0.17
SOX9-AS1-210ENST00000533039 GPATCH8Q9UKJ3 1502 aaKnown RBP14□□□□□ -0.17
SOX9-AS1-210ENST00000533039 TRAPPC8Q9Y2L5 1435 aa14□□□□□ -0.17
SOX9-AS1-210ENST00000533039 CCNB3Q8WWL7 1395 aa14□□□□□ -0.17
SOX9-AS1-210ENST00000533039 SYCP2Q9BX26 1530 aa14□□□□□ -0.17
SOX9-AS1-210ENST00000533039 PLPPR3Q6T4P5 718 aa13.99□□□□□ -0.17
SOX9-AS1-210ENST00000533039 PLEKHH2Q8IVE3 1493 aa13.99□□□□□ -0.17
SOX9-AS1-210ENST00000533039 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
SOX9-AS1-210ENST00000533039 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
SOX9-AS1-210ENST00000533039 LMTK3Q96Q04 1460 aa13.97□□□□□ -0.17
SOX9-AS1-210ENST00000533039 PREX1Q8TCU6 1659 aa13.97□□□□□ -0.17
SOX9-AS1-210ENST00000533039 TIAM1Q13009 1591 aa13.96□□□□□ -0.17
SOX9-AS1-210ENST00000533039 AGLP35573 1532 aa13.95□□□□□ -0.18
SOX9-AS1-210ENST00000533039 KIAA1107Q9UPP5 1409 aa13.95□□□□□ -0.18
SOX9-AS1-210ENST00000533039 HNRNPMP52272 730 aaKnown RBP eCLIP13.94□□□□□ -0.18
SOX9-AS1-210ENST00000533039 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
SOX9-AS1-210ENST00000533039 SPAG9O60271 1321 aaKnown RBP13.93□□□□□ -0.18
SOX9-AS1-210ENST00000533039 INO80Q9ULG1 1556 aaPredicted RBP13.93□□□□□ -0.18
SOX9-AS1-210ENST00000533039 LOC105371045A0A1W2PR82 267 aa13.93□□□□□ -0.18
SOX9-AS1-210ENST00000533039 ESF1Q9H501 851 aaKnown RBP13.93□□□□□ -0.18
SOX9-AS1-210ENST00000533039 C3P01024 1663 aa13.93□□□□□ -0.18
SOX9-AS1-210ENST00000533039 SETD1BQ9UPS6 1966 aaKnown RBP13.92□□□□□ -0.18
SOX9-AS1-210ENST00000533039 ADGBQ8N7X0 1667 aa13.92□□□□□ -0.18
SOX9-AS1-210ENST00000533039 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
SOX9-AS1-210ENST00000533039 MROH2AA6NES4 1674 aa13.89□□□□□ -0.19
SOX9-AS1-210ENST00000533039 NCOA2Q15596 1464 aa13.89□□□□□ -0.19
SOX9-AS1-210ENST00000533039 CEBPAP49715 358 aaPredicted RBP13.88□□□□□ -0.19
SOX9-AS1-210ENST00000533039 HSPA2P54652 639 aa13.87□□□□□ -0.19
SOX9-AS1-210ENST00000533039 CNTLNQ9NXG0 1405 aa13.87□□□□□ -0.19
SOX9-AS1-210ENST00000533039 PLXNC1O60486 1568 aa13.87□□□□□ -0.19
SOX9-AS1-210ENST00000533039 A2MP01023 1474 aa13.87□□□□□ -0.19
SOX9-AS1-210ENST00000533039 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
SOX9-AS1-210ENST00000533039 ZNF644Q9H582 1327 aaPredicted RBP13.86□□□□□ -0.19
SOX9-AS1-210ENST00000533039 CLTCQ00610 1675 aaKnown RBP13.85□□□□□ -0.19
SOX9-AS1-210ENST00000533039 UHRF1BP1Q6BDS2 1440 aa13.85□□□□□ -0.19
SOX9-AS1-210ENST00000533039 CAMSAP2Q08AD1 1489 aa13.85□□□□□ -0.19
SOX9-AS1-210ENST00000533039 LRRC9Q6ZRR7 1453 aa13.85□□□□□ -0.19
SOX9-AS1-210ENST00000533039 MBD5Q9P267 1494 aa13.85□□□□□ -0.19
SOX9-AS1-210ENST00000533039 MAP3K1Q13233 1512 aa13.85□□□□□ -0.19
SOX9-AS1-210ENST00000533039 RTEL1-TNFRSF6BF6WH68 1400 aa13.83□□□□□ -0.2
SOX9-AS1-210ENST00000533039 CCDC141Q6ZP82 1450 aa13.83□□□□□ -0.2
SOX9-AS1-210ENST00000533039 RSPH4AQ5TD94 716 aa13.82□□□□□ -0.2
SOX9-AS1-210ENST00000533039 ARHGEF5Q12774 1597 aa13.81□□□□□ -0.2
SOX9-AS1-210ENST00000533039 STRCQ7RTU9 1775 aa13.81□□□□□ -0.2
SOX9-AS1-210ENST00000533039 APLP2Q06481 763 aa13.79□□□□□ -0.2
SOX9-AS1-210ENST00000533039 GGT6Q6P531 493 aa13.79□□□□□ -0.2
SOX9-AS1-210ENST00000533039 ZMYM3Q14202 1370 aa13.78□□□□□ -0.2
SOX9-AS1-210ENST00000533039 NPATQ14207 1427 aa13.78□□□□□ -0.2
SOX9-AS1-210ENST00000533039 TSPY4P0CV99 314 aa13.77□□□□□ -0.21
SOX9-AS1-210ENST00000533039 TSPY10P0CW01 314 aa13.77□□□□□ -0.21
SOX9-AS1-210ENST00000533039 DHX29Q7Z478 1369 aaKnown RBP13.77□□□□□ -0.21
SOX9-AS1-210ENST00000533039 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
SOX9-AS1-210ENST00000533039 KANK4Q5T7N3 995 aaPredicted RBP13.76□□□□□ -0.21
SOX9-AS1-210ENST00000533039 FBXO41Q8TF61 875 aa13.76□□□□□ -0.21
SOX9-AS1-210ENST00000533039 DMRT2Q9Y5R5 561 aa13.76□□□□□ -0.21
SOX9-AS1-210ENST00000533039 ZNF142P52746 1687 aaPredicted RBP13.75□□□□□ -0.21
SOX9-AS1-210ENST00000533039 MYO3AQ8NEV4 1616 aa13.75□□□□□ -0.21
SOX9-AS1-210ENST00000533039 MYOM3Q5VTT5 1437 aa13.75□□□□□ -0.21
SOX9-AS1-210ENST00000533039 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms