RNA–Protein interactions for RNA: ENST00000532838.1

CKLF-CMTM1-204, Transcript of CKLF-CMTM1 readthrough, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF-CMTM1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-204ENST00000532838 AEBP2Q6ZN18 517 aaPredicted RBP31.85■■■□□ 2.69
CKLF-CMTM1-204ENST00000532838 APLP2Q06481 763 aa31.84■■■□□ 2.69
CKLF-CMTM1-204ENST00000532838 TIAM1Q13009 1591 aa31.84■■■□□ 2.69
CKLF-CMTM1-204ENST00000532838 CDC42BPBQ9Y5S2 1711 aa31.83■■■□□ 2.69
CKLF-CMTM1-204ENST00000532838 CCNB3Q8WWL7 1395 aa31.83■■■□□ 2.69
CKLF-CMTM1-204ENST00000532838 CDC42BPAQ5VT25 1732 aa31.81■■■□□ 2.68
CKLF-CMTM1-204ENST00000532838 RICTORQ6R327 1708 aa31.81■■■□□ 2.68
CKLF-CMTM1-204ENST00000532838 FRMPD1Q5SYB0 1578 aa31.81■■■□□ 2.68
CKLF-CMTM1-204ENST00000532838 POGZQ7Z3K3 1410 aa31.76■■■□□ 2.68
CKLF-CMTM1-204ENST00000532838 MAP3K1Q13233 1512 aa31.75■■■□□ 2.67
CKLF-CMTM1-204ENST00000532838 SUPT6HQ7KZ85 1726 aaKnown RBP31.75■■■□□ 2.67
CKLF-CMTM1-204ENST00000532838 GPATCH8Q9UKJ3 1502 aaKnown RBP31.75■■■□□ 2.67
CKLF-CMTM1-204ENST00000532838 CFDP1Q9UEE9 299 aaPredicted RBP31.74■■■□□ 2.67
CKLF-CMTM1-204ENST00000532838 ZNF777Q9ULD5 760 aaPredicted RBP31.74■■■□□ 2.67
CKLF-CMTM1-204ENST00000532838 ZNF518AQ6AHZ1 1483 aa31.73■■■□□ 2.67
CKLF-CMTM1-204ENST00000532838 ZMYM4Q5VZL5 1548 aa31.73■■■□□ 2.67
CKLF-CMTM1-204ENST00000532838 ITSN2Q9NZM3 1697 aa31.72■■■□□ 2.67
CKLF-CMTM1-204ENST00000532838 MAGI2Q86UL8 1455 aa31.71■■■□□ 2.67
CKLF-CMTM1-204ENST00000532838 LRRC9Q6ZRR7 1453 aa31.7■■■□□ 2.66
CKLF-CMTM1-204ENST00000532838 MYT1LQ9UL68 1186 aa31.68■■■□□ 2.66
CKLF-CMTM1-204ENST00000532838 ABCC1P33527 1531 aa31.68■■■□□ 2.66
CKLF-CMTM1-204ENST00000532838 ZFYVE16Q7Z3T8 1539 aa31.68■■■□□ 2.66
CKLF-CMTM1-204ENST00000532838 ARHGEF40Q8TER5 1519 aa31.68■■■□□ 2.66
CKLF-CMTM1-204ENST00000532838 NCOA2Q15596 1464 aa31.67■■■□□ 2.66
CKLF-CMTM1-204ENST00000532838 PLEKHH2Q8IVE3 1493 aa31.65■■■□□ 2.66
CKLF-CMTM1-204ENST00000532838 ARID4BQ4LE39 1312 aaPredicted RBP31.63■■■□□ 2.65
CKLF-CMTM1-204ENST00000532838 KDM4FA0A1W2PPD8 638 aa31.62■■■□□ 2.65
CKLF-CMTM1-204ENST00000532838 SAMD9LQ8IVG5 1584 aa31.62■■■□□ 2.65
CKLF-CMTM1-204ENST00000532838 AFAP1Q8N556 730 aa31.62■■■□□ 2.65
CKLF-CMTM1-204ENST00000532838 KDM5CP41229 1560 aa31.6■■■□□ 2.65
CKLF-CMTM1-204ENST00000532838 HECW2Q9P2P5 1572 aa31.57■■■□□ 2.64
CKLF-CMTM1-204ENST00000532838 KANK4Q5T7N3 995 aaPredicted RBP31.57■■■□□ 2.64
CKLF-CMTM1-204ENST00000532838 SYCP2Q9BX26 1530 aa31.57■■■□□ 2.64
CKLF-CMTM1-204ENST00000532838 YEATS2Q9ULM3 1422 aa31.57■■■□□ 2.64
CKLF-CMTM1-204ENST00000532838 KIAA1107Q9UPP5 1409 aa31.57■■■□□ 2.64
CKLF-CMTM1-204ENST00000532838 ARHGEF12Q9NZN5 1544 aa31.55■■■□□ 2.64
CKLF-CMTM1-204ENST00000532838 TRAPPC8Q9Y2L5 1435 aa31.55■■■□□ 2.64
CKLF-CMTM1-204ENST00000532838 HNRNPMP52272 730 aaKnown RBP eCLIP31.53■■■□□ 2.64
CKLF-CMTM1-204ENST00000532838 ATP10AO60312 1499 aa31.52■■■□□ 2.64
CKLF-CMTM1-204ENST00000532838 MLH3Q9UHC1 1453 aa31.51■■■□□ 2.63
CKLF-CMTM1-204ENST00000532838 C9orf84Q5VXU9 1444 aa31.49■■■□□ 2.63
CKLF-CMTM1-204ENST00000532838 SPAG9O60271 1321 aaKnown RBP31.48■■■□□ 2.63
CKLF-CMTM1-204ENST00000532838 ZNF644Q9H582 1327 aaPredicted RBP31.46■■■□□ 2.63
CKLF-CMTM1-204ENST00000532838 CAMSAP2Q08AD1 1489 aa31.44■■■□□ 2.62
CKLF-CMTM1-204ENST00000532838 MYOM3Q5VTT5 1437 aa31.43■■■□□ 2.62
CKLF-CMTM1-204ENST00000532838 BCORL1Q5H9F3 1711 aa31.43■■■□□ 2.62
CKLF-CMTM1-204ENST00000532838 RSPH4AQ5TD94 716 aa31.41■■■□□ 2.62
CKLF-CMTM1-204ENST00000532838 DIP2CQ9Y2E4 1556 aa31.41■■■□□ 2.62
CKLF-CMTM1-204ENST00000532838 MIA2Q96PC5 1412 aa31.4■■■□□ 2.62
CKLF-CMTM1-204ENST00000532838 ABCA6Q8N139 1617 aa31.39■■■□□ 2.62
CKLF-CMTM1-204ENST00000532838 KIDINS220Q9ULH0 1771 aa31.38■■■□□ 2.61
CKLF-CMTM1-204ENST00000532838 ATP7AQ04656 1500 aa31.37■■■□□ 2.61
CKLF-CMTM1-204ENST00000532838 ADAMTSL3P82987 1691 aa31.36■■■□□ 2.61
CKLF-CMTM1-204ENST00000532838 REREQ9P2R6 1566 aa31.35■■■□□ 2.61
CKLF-CMTM1-204ENST00000532838 CCDC141Q6ZP82 1450 aa31.35■■■□□ 2.61
CKLF-CMTM1-204ENST00000532838 MBD5Q9P267 1494 aa31.35■■■□□ 2.61
CKLF-CMTM1-204ENST00000532838 MLECQ14165 292 aa31.34■■■□□ 2.61
CKLF-CMTM1-204ENST00000532838 INO80Q9ULG1 1556 aaPredicted RBP31.33■■■□□ 2.61
CKLF-CMTM1-204ENST00000532838 TSPY4P0CV99 314 aa31.31■■■□□ 2.6
CKLF-CMTM1-204ENST00000532838 TSPY10P0CW01 314 aa31.31■■■□□ 2.6
CKLF-CMTM1-204ENST00000532838 MADDQ8WXG6 1647 aa31.3■■■□□ 2.6
CKLF-CMTM1-204ENST00000532838 ARHGEF5Q12774 1597 aa31.3■■■□□ 2.6
CKLF-CMTM1-204ENST00000532838 SIGLEC1Q9BZZ2 1709 aa31.29■■■□□ 2.6
CKLF-CMTM1-204ENST00000532838 RTEL1-TNFRSF6BF6WH68 1400 aa31.28■■■□□ 2.6
CKLF-CMTM1-204ENST00000532838 AGLP35573 1532 aa31.25■■■□□ 2.59
CKLF-CMTM1-204ENST00000532838 PTPRMP28827 1452 aa31.24■■■□□ 2.59
CKLF-CMTM1-204ENST00000532838 RIMS1Q86UR5 1692 aaKnown RBP31.23■■■□□ 2.59
CKLF-CMTM1-204ENST00000532838 ADGBQ8N7X0 1667 aa31.23■■■□□ 2.59
CKLF-CMTM1-204ENST00000532838 PTPN23Q9H3S7 1636 aa31.23■■■□□ 2.59
CKLF-CMTM1-204ENST00000532838 FGD6Q6ZV73 1430 aa31.23■■■□□ 2.59
CKLF-CMTM1-204ENST00000532838 FER1L4A9Z1Z3 1794 aa31.22■■■□□ 2.59
CKLF-CMTM1-204ENST00000532838 ESF1Q9H501 851 aaKnown RBP31.22■■■□□ 2.59
CKLF-CMTM1-204ENST00000532838 A2MP01023 1474 aa31.21■■■□□ 2.59
CKLF-CMTM1-204ENST00000532838 PLXNC1O60486 1568 aa31.13■■■□□ 2.57
CKLF-CMTM1-204ENST00000532838 TCOF1Q13428 1488 aaKnown RBP31.13■■■□□ 2.57
CKLF-CMTM1-204ENST00000532838 PLPPR3Q6T4P5 718 aa31.12■■■□□ 2.57
CKLF-CMTM1-204ENST00000532838 MAST1Q9Y2H9 1570 aa31.12■■■□□ 2.57
CKLF-CMTM1-204ENST00000532838 DHX29Q7Z478 1369 aaKnown RBP31.1■■■□□ 2.57
CKLF-CMTM1-204ENST00000532838 FAM50AQ14320 339 aaKnown RBP31.09■■■□□ 2.57
CKLF-CMTM1-204ENST00000532838 SHANK2Q9UPX8 1470 aa31.06■■■□□ 2.56
CKLF-CMTM1-204ENST00000532838 CNTLNQ9NXG0 1405 aa31.06■■■□□ 2.56
CKLF-CMTM1-204ENST00000532838 DNMT1P26358 1616 aaKnown RBP31.06■■■□□ 2.56
CKLF-CMTM1-204ENST00000532838 PPARGC1BQ86YN6 1023 aaKnown RBP31.05■■■□□ 2.56
CKLF-CMTM1-204ENST00000532838 CROCC2H7BZ55 1655 aa31.05■■■□□ 2.56
CKLF-CMTM1-204ENST00000532838 GGT6Q6P531 493 aa31.04■■■□□ 2.56
CKLF-CMTM1-204ENST00000532838 DAPK1P53355 1430 aa31.04■■■□□ 2.56
CKLF-CMTM1-204ENST00000532838 ABCC5O15440 1437 aa31.02■■■□□ 2.56
CKLF-CMTM1-204ENST00000532838 KIF3BO15066 747 aa31.01■■■□□ 2.55
CKLF-CMTM1-204ENST00000532838 PPP6R1Q9UPN7 881 aa31.01■■■□□ 2.55
CKLF-CMTM1-204ENST00000532838 ANKRD30AQ9BXX3 1397 aa30.94■■■□□ 2.54
CKLF-CMTM1-204ENST00000532838 DUOX2Q9NRD8 1548 aa30.94■■■□□ 2.54
CKLF-CMTM1-204ENST00000532838 KIF15Q9NS87 1388 aa30.93■■■□□ 2.54
CKLF-CMTM1-204ENST00000532838 CEBPAP49715 358 aaPredicted RBP30.93■■■□□ 2.54
CKLF-CMTM1-204ENST00000532838 MROH2AA6NES4 1674 aa30.93■■■□□ 2.54
CKLF-CMTM1-204ENST00000532838 CHIC2Q9UKJ5 165 aa30.92■■■□□ 2.54
CKLF-CMTM1-204ENST00000532838 RRP7BPQ9NSQ0 103 aa30.91■■■□□ 2.54
CKLF-CMTM1-204ENST00000532838 EIF2AK4Q9P2K8 1649 aaKnown RBP30.91■■■□□ 2.54
CKLF-CMTM1-204ENST00000532838 C3P01024 1663 aa30.9■■■□□ 2.54
CKLF-CMTM1-204ENST00000532838 CLTCQ00610 1675 aaKnown RBP30.9■■■□□ 2.54
CKLF-CMTM1-204ENST00000532838 FAM135AQ9P2D6 1515 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms